These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9562#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 739 fasta sequence [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCATGGCTCCGTCTCGCAAGAATAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA-GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA-TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT-GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGG-TGGCGGT-GGTT-CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAAAAAAAAAGGC] [+] EMBL CNS09MQN [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCATGGCTCCGTCTCGCAAGAATAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCC ] [+] EMBL BM615854 [ TCTCGCAAGAATAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGGGACGGATCTGTCCGGGAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCATTTATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGC ] [+] EMBL BM600087 [ ccgAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGGTTGGCGGTGGGTTCCCGGATGTACTACTT ] [+] EMBL BM649110 [ AAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGAT ] [-] EMBL CNS098KB [ CAGGTCCGCGACGGTGAGGTCGTTTTCGGCGTTGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATTTGACGGATCTTTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAG TGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGGCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAA ] [-] EMBL CNS09RUI [ CGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGTATGAAGGTGAAGGCCGATCGTGACGAAGCGTCCCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTCCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAAGGC ] [-] EMBL AGA281555 [ CGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATT ] [-] EMBL CNS0920B [ TTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAAACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGC] [+] EMBL CNS08PZO [ GAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCTCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAA GGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGG TGGCGGT GCTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAggt ] [-] EMBL AGA284560 [ cgaATCGTGACAAAACTTCCCCGTACCCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGSGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAA ] [-] EMBL CNS0924Q [ CCGCTATGTTGGCCGCCCA GGATGTGGCCGAAAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGTTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGG TGGCGGT GCTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAcc ] [-] EMBL CNS09MQO [ GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACATTCAAG TGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCAT ] [+] EMBL BM617255 [ ccGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGGGCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACC ] [-] EMBL AGA283605 [ CGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAA ] consensusID : consensus_9562#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 718 fasta sequence [CCGCGGACGCGTGGGAGCGCTACCAGCAGCAGCTGAAGGACGTCCAGAGCGCCCTGGAGGAGGAACAGCGCGCCCGCGACGATGCCCGCGAGCAGCTGGGTATCTCGGAGCGCCGTGCCAACGCTCTCCAGAACGAACTGGAGGAGTCGCGCACCCTGTTGGAGCAGGCCGACCGTGGCCGTCGCCAGGCCGAGCAGGAGCTCAGCGATGCTCACGAGCAGCTGAACGAAGTGTCCGCCCAGAACGCTTCGATCGCCGCCGCCAAGAGGAAGCTCGAGTCTGAGCTGCAGACCCTGCACTCCGACCTGGATGAGCTGCTGAACGAGGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCTATGGTTGATGCCGCTCGTCTGGCTGATGAGCTGCGCGCCGAGCAGGACCATGCCCAGACCCAGGAGAAGCTGCGCAAGGCGCTTGAGCAGCAGATCAAGGAGCTGCAGGTCCGCCTGGATGAGGCCGAATCGAACGCCCTGAAGGGAGGCAAGAAGGCTATCCAGAAGCTGGAGCAGCGCGTCCGCGAGCTCGAGTCGGAGCTGGACAGCGAACAGAGACGACATGCCGATGCCCAGAAGAACCTTGCGCAAGTCGGAGCGTCGCATCAAGGAGCTGACCTTCCAGTCGGAGGAAGACCGCAAGAACCACGAGCGCATGCAGGATCTGGTTGACAAGCTGCAGCAGAAGATCAAGACTT] [+] EMBL BM630032 [CCGCGGACGCGTGGGAGCGCTACCAGCAGCAGCTGAAGGACGTCCAGAGCGCCCTGGAGGAGGAACAGCGCGCCCGCGACGATGCCCGCGAGCAGCTGGGTATCTCGGAGCGCCGTGCCAACGCTCTCCAGAACGAACTGGAGGAGTCGCGCACCCTGTTGGAGCAGGCCGACCGTGGCCGTCGCCAGGCCGAGCAGGAGCTCAGCGATGCTCACGAGCAGCTGAACGAAGTGTCCGCCCAGAACGCTTCGATCGCCGCCGCCAAGAGGAAGCTCGAGTCTGAGCTGCAGACCCTGCACTCCGACCTGGATGAGCTGCTGAACGAGGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCTATGGTTGATGCCGCTCGTCTGGCTGATGAGCTGCGCGCCGAGCAGGACCATGCCCAGACCCAGGAGAAGCTGCGCAAGGCGCTTGAGCAGCAGATCAAGGAGCTGCAGGTCCGCCTGGATGAGGCCGAATCGAACGCCCTGAAGGGAGGCAAGAAGGCTATCCAGAAGCTGGAGCAGCGCGTCCGCGAGCTCGAGTCGGAGCTGGACAGCGAACAGAGACGACATGCCGATGCCCAGAAGAACCTTGCGCAAGTCGGAGCGTCGCATCAAGGAGCTGACCTTCCAGTCGGAGGAAGACCGCAAGAACCACGAGCGCATGCAGGATCTGGTTGACAAGCTGCAGCAGAAGATCAAGACTT] consensusID : consensus_9562#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [CCGCCCACGCGTCCGCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGCGTGTGGGTGTTCGCGCTGTTCTGGACTCTGGCCCCGCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCCTGCGGAACCGACTACCTGACCCAGACGTGGCTGAGCCGCTCGTACATCATCATCTACGCCATCTTCGTGTACTGGCTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGAGCAGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAG] [+] EMBL BM603337 [CCGCCCACGCGTCCGCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGCGTGTGGGTGTTCGCGCTGTTCTGGACTCTGGCCCCGCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCCTGCGGAACCGACTACCTGACCCAGACGTGGCTGAGCCGCTCGTACATCATCATCTACGCCATCTTCGTGTACTGGCTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGAGCAGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAG] consensusID : consensus_9562#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence [CCGCGGACGCGTGGGCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACATCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTTGGTTGGTTGGTGGGTGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAGTTAC] [+] EMBL BM608061 [CCGCGGACGCGTGGGCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACATCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTTGGTTGGTTGGTGGGTGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAGTTAC] consensusID : consensus_9562#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 264 fasta sequence [GTACGTCTTGGCGTAGTGTGGATAGGCAACGGTGTAAAGAGCGTTAACGAGGATGTTAAATTTGTAGATGGTCCGTTGCATATCTGGATGCGGGTAAAAGCTGGTCCCGATGGAACCGGTGGAATAAGCGGCTGCCGTTCGGAGGGGGCGCACGGCCATGGTACGACCGTTCCATGACCGGGGGTCGCCTCAAGCGCAGGCGATTTGGTTTTTTTTGCCGGCAGTTGGCTGGCCGCGAGCAGCGAGCATGCGGGCGGCAGCGGG] [+] EMBL CNS08I84 [GTACGTCTTGGCGTAGTGTGGATAGGCAACGGTGTAAAGAGCGTTAACGAGGATGTTAAATTTGTAGATGGTCCGTTGCATATCTGGATGCGGGTAAAAGCTGGTCCCGATGGAACCGGTGGAATAAGCGGCTGCCGTTCGGAGGGGGCGCACGGCCATGGTACGACCGTTCCATGACCGGGGGTCGCCTCAAGCGCAGGCGATTTGGTTTTTTTTGCCGGCAGTTGGCTGGCCGCGAGCAGCGAGCATGCGGGCGGCAGCGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9562#0 -----------------CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTC 43 consensus_9562#3 ------------------------------------------------------------ consensus_9562#4 ------------------------------------------------------------ consensus_9562#1 CCGCGGACGCGTGGGAGCGCTACCAGCAGCAGCTGAAGGACGTCCAGAGCGCCCTGGAGG 60 consensus_9562#2 CCGCCCACGCGT-------CCGCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCG 53 consensus_9562#0 CCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCATGGCTC-CGTCTCGCAA-GAAT 101 consensus_9562#3 -------------------------------------------------CCGCGG-ACGC 10 consensus_9562#4 ------------------------------------------------------------ consensus_9562#1 AGGAACAGCGCGCCCGCGACGATGCCCGCGAGCAGCTGGGTATCTCGGAGCGCCG-TGCC 119 consensus_9562#2 GCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCAT-----TCTGGGCGTGTGGGTGTT 108 consensus_9562#0 AAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTC 161 consensus_9562#3 GTGGGCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTC 70 consensus_9562#4 ------------------------------------------------------------ consensus_9562#1 AACGCTCTCCAGAACGAACTGGAGGAGTCGCGCACCCTGTTGGAGCAGGCCGACCGTGGC 179 consensus_9562#2 CGCGCTGTTCTGGACTCTGGCCCCGCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAA 168 consensus_9562#0 GTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGAT 221 consensus_9562#3 GTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGAT 130 consensus_9562#4 ------------------------------------------------------------ consensus_9562#1 CGTCGCCAGGCCGAGCAGGAGCTCAGCGATGCTCACGAGCAGCTGAACGAAGTGTCCGCC 239 consensus_9562#2 CATGACCGCCTGCGGAACCGACTACCTGA--CCCAGACGTGGCTGAGCCGCTCGTACATC 226 consensus_9562#0 CTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGG---CCGAT 278 consensus_9562#3 CTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGG---CCGAT 187 consensus_9562#4 ---------------------------------------------------G---TACGT 6 consensus_9562#1 CAGAACGCTTCGATCGCCGCCGCCAAGAGGAAGCTCGAGTCTGAGCTGCAGACCCTGCAC 299 consensus_9562#2 ATCATCTACGCCATCTTCGTGTACTGGCTGCCGCTGCTGACCATCATCTACTCGTACACC 286 consensus_9562#0 CGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGC 338 consensus_9562#3 CGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGC 247 consensus_9562#4 CTTGGCGTAGTGTGGATAGGCAACGGTGTAAAGAGCGTTAACGAGGATGTTAA-ATTTGT 65 consensus_9562#1 TCCGACCTGGATGAGCTGCTGAACGAGGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCT 359 consensus_9562#2 TTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGAGCAGGCCAAGAAGATG 346 * * * ** * * * consensus_9562#0 AAATCGCTCGGCAT-TACCGCACTGCACATCAAGCTGCGCGCTACCGGTGGTAACCGCAC 397 consensus_9562#3 AAATCGCTCGGCAT-CACCGCACTGCACATCAAGCTGCGCGCTACTGGTGGTAACCGCAC 306 consensus_9562#4 AGATGGTCCGTTGCATATCTGGATGCGGGTAAAAGC---TGGTCCCGATGG-AACCGGTG 121 consensus_9562#1 ATGGTTGATGCCGCTCGTCTGGCTGATGAGCTGCGCGC-CGAGCAGGACCATGCCCAGAC 418 consensus_9562#2 AACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCC 406 * * * * consensus_9562#0 CAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGT--CGATG 455 consensus_9562#3 CAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGT--CGATG 364 consensus_9562#4 GAATAAGC--GGCT--GCCGTTCGGAGGGGGCGCACGGCCATGGTACGACCGTT-CCATG 176 consensus_9562#1 CCAGGAGA--AGCTGCGCAAGGCGCTTGAGCAGCAGATCAAGGAGCTGCAGGTC-CGCCT 475 consensus_9562#2 AAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATC 466 * * * * * * consensus_9562#0 AAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGC-CGCAAGGG 514 consensus_9562#3 AAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGC-CGCAAGGG 423 consensus_9562#4 ACCGGGGGTCGCCTCAAGCGCAGG----CGATTT-----GGTTTTTTTTGC-CGGCAGTT 226 consensus_9562#1 GGATGAGGCCGAATCGAACGCCCTGAAGGGAGGCAAGAAGGCTATCCAGAAGCTGGAGCA 535 consensus_9562#2 AACTTCACCGGAATCTTCAAGGCTGCCCCGATC--AGCCCGCTGGCCACCATCTGGGGCT 524 * ** ** * * * consensus_9562#0 TGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTT 574 consensus_9562#3 TGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTT 483 consensus_9562#4 GGCTGGCCGCGAGCAGCGAGCATGCGGGCGGCAGCGGG---------------------- 264 consensus_9562#1 GCGCGTCCGCGAGC-TCGAGTCGGAGCTGGACAGCGAACAGAGACGACATGCCGATGCCC 594 consensus_9562#2 CGCTGTTCGCCAAGGCCAACGCCGTCTACAACC-CGATCGTGTACGGCAT--CAGCCATC 581 ** * * * consensus_9562#0 GGTTGGTGGGTG-G-TGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAG 632 consensus_9562#3 GGTTGGTTGGTG-GGTGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAG 542 consensus_9562#4 ------------------------------------------------------------ consensus_9562#1 AGAAGAACCTTGCGCAAGTCGGAGCGTCGCATCAAGGAGCTGACCTTCCAGTCGGAGGAA 654 consensus_9562#2 CGAAGTATCGCG-CTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCA 640 consensus_9562#0 TTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAA 692 consensus_9562#3 TTAC-------------------------------------------------------- 546 consensus_9562#4 ------------------------------------------------------------ consensus_9562#1 GACCGCAAGAACCACGAGCGCATGCAGGATCTGGTTGACAAGCTGCAGCAGAAGATCAAG 714 consensus_9562#2 GTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACC--CAGGCCTCGGACGAG------- 691 consensus_9562#0 CCAACCAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAAAAAAAAAGGC 739 consensus_9562#3 ----------------------------------------------- consensus_9562#4 ----------------------------------------------- consensus_9562#1 ACTT------------------------------------------- 718 consensus_9562#2 ----------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||