These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9565#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1338 fasta sequence [CCGCACGAATCTAAACATTAAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG-T-CG-CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA-GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC-GGTAT-GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG-TGGAAATCGATGACCTATTA-CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG-AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC-GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCATTGTCTAGCATA] [+] EMBL BM649835 [CCGCACGAATCTAAACATTAAAAATGGTTTCGAGAAACCTCTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG TCCG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAACAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTTGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGTTGAAATATCCGTACGTTCAACCACCCTATACGCTAGTGCTTG AAATGAAAGATGT ] [+] EMBL CNS08PIX [ AAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACAC ] [+] EMBL CNS0902E [ aaccAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCC ] [+] EMBL CNS08TY2 [ AAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACT ] [+] EMBL CNS08JUC [ ATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CGACTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTCGAAGACGATGAAc ] [+] EMBL BX606792 [ TCGAGAAACCTCTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG TCCG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAACAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTTGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGT ] [+] EMBL BM594418 [ ccgGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGTCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGCC CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCTTGTCCGCTTTCTGTGTGTACACGGGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCACTGAAATATCCGTACGTTCAACCACCCTATACTCTTGTGCTTGAAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAAC ] [+] EMBL BM645838 [ ccgGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGTCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGCC CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTC TTTCTGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCTTGTCCGCTTTCTGTGTGTACACGGGTATGGGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTACCCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCACTGAAATATCCGTACGTTCAACCA ] [-] EMBL CNS0902F [ AAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCATTGTCT ] [+] EMBL CNS09O7H [ CGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTAC C GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGACGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACG ] [+] EMBL CNS095DQ [ GCAGAGAA GGAATCTTTTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCTTTTTTTTTAGGGTAACATTATCGTCGACGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATGATGGAAATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGACGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTC ] [-] EMBL CNS095DR [ GTGCGCCTGACCGAGACGCAGAGGGTAAAATTATCGTCGACGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTTTTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAATTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGAAAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGA ] [-] EMBL CNS09O7I [ ATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGGTCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAGATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTGCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGAATCAGCGATGGAGACCGAGTTGTGTGGGTGGCGGACGCTAGATACGat ] [-] EMBL CNS08PIY [ ATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC AGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCATAGACAAGCATA] [-] EMBL CNS08JUD [ GCGTCCCGGGCGTCGACAAGTTCCTTGAAACGCTGGCAAAAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCAT ] [-] EMBL CNS08TY3 [ AAAAGATGGACGCAAAATATGAAATTGTAGTGTTCACCGCCGATCAAGGGATAACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCAT ] consensusID : consensus_9565#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 557 fasta sequence [GAATCGCCCGAGGCGAGAAACTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAA] [+] EMBL AL932832 [GAATCGCCCGAGGCGAGAAACTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAA] consensusID : consensus_9565#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 512 fasta sequence [ATCGCACGAGGTTNATCGTCTTCTTTGGATTTTCCGTGTCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGATCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGGAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATC] [+] EMBL AL930686 [ATCGCACGAGGTTNATCGTCTTCTTTGGATTTTCCGTGTCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGATCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGGAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9565#0 CCGCACGAATCTAAACATTAAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCA 60 consensus_9565#1 -----------GAATCGCCCGAGG------CGAGAAAC-TGTTCGACTTTCTTCGTTTCA 42 consensus_9565#2 -------------ATCGCACGAGGT-----TNATCGTCTTCTTTGGATTT-TCCGTGTCG 41 * * * * * * ** * *** * *** ** consensus_9565#0 GACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGC 120 consensus_9565#1 GACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGC 102 consensus_9565#2 ------CTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGAT-CGAGACGCAGAG 94 ** * * ** * * * * * * ** * * *** consensus_9565#0 AGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTC-GCTTCCATCTA 179 consensus_9565#1 AGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTA 162 consensus_9565#2 GGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGG 154 *** * * * * ** * * * ** * **** * consensus_9565#0 A-ATGGATCCGGTCGTACTGT-ACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCT 237 consensus_9565#1 A-ATGGATCCGGTCGTACTGT-ACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCT 220 consensus_9565#2 ATGTGGAAATCGATGACCTATTACCAAAAAATGATTCAAGAACCGTCA-CGCGAAAAACT 213 * **** * * ** * *** *** * ** * * * * ** consensus_9565#0 CTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACC 297 consensus_9565#1 CTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACC 280 consensus_9565#2 ATTGCCCGAC-CCGCTGGAATA---TCCGT--ACGTTCAACCACCCTATACGCTTGTGC- 266 ** * * ****** * ** *** **** * ** * * * consensus_9565#0 GCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCA 357 consensus_9565#1 GCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCA 340 consensus_9565#2 ----TTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACC-AAACTGGCTGGCG 321 *** * **** * * * * *** ** * *** *** ** ** consensus_9565#0 GCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAA 417 consensus_9565#1 GCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAA 400 consensus_9565#2 TTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCC--GCAAACTATGAA 379 ****** ** * ** ** * * * * * ***** consensus_9565#0 GTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGT 477 consensus_9565#1 GTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGT 460 consensus_9565#2 ATT----------------GTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGAT 423 ** * * * * * *** * * ** * * * * consensus_9565#0 GTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTAT-CGTCGATGAGTTCATGGAAC 536 consensus_9565#1 GTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTAT-CGTCGATGAGTTCATGGAAC 519 consensus_9565#2 ACTGGACGCTCTTGATC------CTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGC 477 * * ** * *** * * *** **** ** ** * ** * * consensus_9565#0 TGCCCACCTT-TCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAA 595 consensus_9565#1 TGCCCACCTT-TCAGCAATATTTCCGTAGGATGTGGAAA--------------------- 557 consensus_9565#2 TACACACTTTGTCGATGGTCATCATGTGAAAAATC------------------------- 512 * * *** ** ** * * ** * * consensus_9565#0 ATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTT 655 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 CAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACC 715 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 TATCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTG 775 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 GCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATA 835 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 CTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACAC 895 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 TTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTG 955 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 ATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATA 1015 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 CCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTG 1075 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 ACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTT 1135 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 GAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAA 1195 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 CGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTT 1255 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 CTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATT 1315 consensus_9565#1 ------------------------------------------------------------ consensus_9565#2 ------------------------------------------------------------ consensus_9565#0 TGCCGTTATCATTGTCTAGCATA 1338 consensus_9565#1 ----------------------- consensus_9565#2 ----------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||