These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9566#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1329 fasta sequence [CATGTCAATCAAACTGTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG----TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT-CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCCGGACGCGTGGGCGG] [-] EMBL BM593428 [CATGTCAATCAAACTGTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTcgg ] [+] EMBL BM629936 [ TCAAACTGTAAAAGTTGATAAATGTGTTTATGGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAAACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGT ] [+] EMBL CNS08F84 [ GTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATCCCGGGCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTCCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAAAAAAAACTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTATTTATTGAA ] [+] EMBL CNS09FVB [ AAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAAAAAAAATGGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGAAACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTCCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTTTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG TTTTTTTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGAGGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAA ] [+] EMBL BX625499 [ TTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATATTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATCAAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCTATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGAC ] [-] EMBL BX621214 [ TCAATGGAAGACAGTTTTGTGCAGACATGTGTAAGNATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATAAAGTTAAANCAAAAGATGGACATTAAGCATTCCATTCAATGAGNTACATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTNCTGCANTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGNGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTNCGACCAGTTCAGAACTGAGCCGGAAT ] [-] EMBL CNS09FVA [ taaaAAAGGAAGAAAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTAACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTCCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTGCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGTTTTTATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGC ] [-] EMBL BX626021 [ AGTTTTGTGCAGACATGTGTAAGGATAGACCATCGGGNTATGACAAAAAGGAGAATNGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTACATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTTTGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGACACTTGGGATAG ] [-] EMBL BX622283 [ CATTCAATGAGCTACATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTTTGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACANCGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACAC ] [-] EMBL BX611401 [ TAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCTATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTTTGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAGCGATGTCTACCCATAGTCATATACTGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGTTGTTGCTAATTGGCCTAACGATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTATGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAACAGGGGGGACACTTGGGATAGAT ] [-] EMBL BM593362 [ CTCTTCGTTCTGTG TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCCGGACGCGTGGGCGG] consensusID : consensus_9566#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1008 fasta sequence [AACGATGTCTGCCCATAGTCATATACTGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGTTGTTGCTAATTGGCCTAACGATTGAACCTACGACATGTTTTTATTCGACTCGCACGTGTCACACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAAATTCGGACCGAGTTTACACAC-CAACAAGGGGGACACTTGGGATAGATGTTGTAGGGATTCGTGTAGGATGTGTAGGGAAAAAAGTAAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC-TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCCGGGGATCCAGTTGAAGCGGCCAAAGCCGGGCTTTTCGTAGAACGTTACCAGCTCAATGACGGCCGGGAACATCAATCCCAGCGTGCTAAGGCACACCGCCCCGATGAGCGTGATGAACGCGG] [-] EMBL BM595563 [AACGATGTCTGCCCATAGTCATATACTGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGTTGTTGCTAATTGGCCTAACGATTGAACCTACGACATGTTTTTATTCGACTCGCACGTGTCACACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAAATTCGGACCGAGTTTACACACTCAACAAGGGGGACACTTGGGATAGATGTTGTAGGGATTCGTGTAGGATGTGTAGGGAAAAAAGTAAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATAGATTCAACGTGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGcgg ] [-] EMBL BM640521 [ c aataggGGGGGACACTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCCGG ] [-] EMBL BM619050 [ ACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTTGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCACAGGATCCAGTTGAAGCGGCCAAAGCCGGGCTTTTCGTAGAACGTTACCAGCTCAATGACGGCCGGGAACATCAATCCCAGCGTGCTAAGGCACACCGCCCCGATGAGCGTGATGAACGCGG] [-] EMBL CNS08F83 [ ATAGAAAAATCAATTTTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACCCCCGCGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGT CACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACC ] consensusID : consensus_9566#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 622 fasta sequence [ATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGCTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGGACACTTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTATGGAAAAAGGTAAGGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATC-GACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCACNCTCGTGCGCGATTCTGC] [-] EMBL BX468827 [ATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGCTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGGACACTTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTATGGAAAAAGGTAAGGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATC GACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCACNCTCGTGCGCGATTCTGC] [-] EMBL BM615419 [ TTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGG TGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAG CTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATA GGGGGGACAC TTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTAAGGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATCGGACGcgtgggcgg ] consensusID : consensus_9566#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence [CCCGAGGTTACTACTAATACGTCTAGAGCTCTATTCTTTACTTTATATTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAACTGGAAGACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGAGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATCAAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCGTATTAGTAGATCGTTGTAAGTACCCCGGGCCTCGTGCTTCGTTTATATTTTCAGAATAATTATCTCAATAAATACATTTATCAACTTTTACAGTTTGACT] [+] EMBL AL930658 [CCCGAGGTTACTACTAATACGTCTAGAGCTCTATTCTTTACTTTATATTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAACTGGAAGACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGAGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATCAAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCGTATTAGTAGATCGTTGTAAGTACCCCGGGCCTCGTGCTTCGTTTATATTTTCAGAATAATTATCTCAATAAATACATTTATCAACTTTTACAGTTTGACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9566#0 CATGTCAATCAAACTGTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAAT 60 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ----------------------------------AACGATGTCTGCCCATAGTCATATAC 26 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 ATAAACGAAGCACGAGGCCCGGGGTACTTACAACGAT-CTACTAATACGTCTAGAGCTCT 119 consensus_9566#3 ----------------------------CCCGAGGTTACTACTAATACGTCTAGAGCTCT 32 consensus_9566#1 TGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGG-TGT 85 consensus_9566#2 ---------------ATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGCTGC 45 * * **** ** * * * * consensus_9566#0 ATTCTTTACTTTATGTTACG-------CTACGT---AGTCATGTGCAAAAACTACC--GC 167 consensus_9566#3 ATTCTTTACTTTATATTACG-------CTACGT---AGTCATGTGCAAAAACTACC--GC 80 consensus_9566#1 TGTTGCTAATTGGCCTAACGATTGAACCTACGA------CATGTTTTTATTCGACTC-GC 138 consensus_9566#2 TGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGC 105 * ** ** * ** ***** ***** * * ** ** consensus_9566#0 TT-CAACGCACTCTACTATGTA-TACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTA 225 consensus_9566#3 TT-CAACGCACTCTACTATGTA-TACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTA 138 consensus_9566#1 ACGTGTCACACCCAACAACGTAACATCAGC--TTGATTAATTTCCCTACTTCAT-TCTCT 195 consensus_9566#2 ACGTGTCGCACCCAACAACGTAACATCAGCC-TTGATTAATTTCCCTACTTCAT-TCTCT 163 * *** * ** * *** * * * **** ** ** * ** *** consensus_9566#0 AGTGGTGGTATGGTTGTTCGGCTG---TTTGATATATTCTTTTTGA--TACACGTGATAC 280 consensus_9566#3 AGTGGTGGTATGGTTGTTCGGCTG---TTTGATATATTCTTTTTGA--TACACGTGATAC 193 consensus_9566#1 GTCGCAGACATGGTTCCCGAATCAAATTCGGACCGAGTTTACACA--CCAACAAGGGGGA 253 consensus_9566#2 GTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGGA 223 * * ****** * ** * * * * * consensus_9566#0 CATTTTCAA-TGGAAG----ACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCG-GG 334 consensus_9566#3 CATTTTCAACTGGAAG----ACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGAGG 249 consensus_9566#1 CACTT-GGGATAGATGTTGTAGGGATTCGTGTAGG-ATGTGTAGGGAAAAAA----GTAA 307 consensus_9566#2 CACTTTGGGATAGATGCTGTCGGGATTCGTGTAGG-ATGTGTATGGAAAAAG----GTAA 278 ** ** * ** * * ** *** ** ** ** * *** * * * consensus_9566#0 GTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCA-ACAATCTTTCAAATGTTTTGT 393 consensus_9566#3 GTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCA-ACAATCTTTCAAATGTTTTGT 308 consensus_9566#1 GGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTA-AA 366 consensus_9566#2 GGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTA-AA 337 * * *** *** * *** ** * * * ** * ** ** consensus_9566#0 CAGGTGGATGAAGAAGACA--AAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAA 451 consensus_9566#3 CAGGTGGATGAAGAAGATC--AAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAA 366 consensus_9566#1 CACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTAC 426 consensus_9566#2 CACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTAC 397 ** * ** ** * ** ** *** * * ** * * consensus_9566#0 TGAGCTGCATCTGTAACAGCATCGGTAGTT-ATTGGTAGCATGCTACTGCACTAGGATTA 510 consensus_9566#3 TGAGCTGCATCTGTAACAGCATCGGTAGTT-ATTGGTAGCATGCTACTGCACTAGGATTA 425 consensus_9566#1 TAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTG-ATGAAGACGG 485 consensus_9566#2 TAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTG-ATGAAGACGG 456 * ** * ** * ** * ** * * * * * * * ** * * ** consensus_9566#0 TAATG-------GCAATCCGTT--CATTTCGAGCATC-----TAGTCCACTAGGAACATT 556 consensus_9566#3 TAATG-------GCAATCCGTT--CATTTCGAGCATC-----TAGTCGTATTAGTAGATC 471 consensus_9566#1 TAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATCGACG 545 consensus_9566#2 TAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATCGACG 516 *** * * * * ** ** **** * * * * consensus_9566#0 CCCTCACGCGCGATA-CGCCCTTAGG---GTGTGTAGGATTAAAACAGT-AGATAAA-TA 610 consensus_9566#3 GTTGTAAGTACCCCG-GGCCTCGTGCTTCGTTTATATTTTCAGAATAATTATCTCAA-TA 529 consensus_9566#1 GCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTC 605 consensus_9566#2 GCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTC 576 * * * * * * * * * consensus_9566#0 TACGCTTCCG---ACCAG-TTC-AGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATC 665 consensus_9566#3 AATACATTTA---TCAAC-TTTTACAGTTTGACT-------------------------- 559 consensus_9566#1 AAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCA-AACTCGCCATGCCCCACCCTGT 664 consensus_9566#2 AAGACGTCTGCAGTCAGCGCCTCACCACNCTCGTGCGCGATTCTGC-------------- 622 * * * * * consensus_9566#0 GATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCT 725 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 AGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACA 724 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 GAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTGTGTACATTATCATA 785 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTC 784 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 AAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGAC 845 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGAC 844 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 TTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTG 905 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 GAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCCGGGGATCCAGTTGAAGCG 904 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 CTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTG 965 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 GCCAAAGCCGGGCTTTTCGTAGAACGTTACCAGCTCAATGACGGCCGGGAACATCAATCC 964 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 TCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGA 1025 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 CAGCGTGCTAAGGCACACCGCCCCGATGAGCGTGATGAACGCGG---------------- 1008 consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 CATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGGA 1085 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ------------------------------------------------------------ consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 TAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGA 1145 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ------------------------------------------------------------ consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 CAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAA 1205 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ------------------------------------------------------------ consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 CTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGA 1265 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ------------------------------------------------------------ consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 CGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCCGGACGCGTGG 1325 consensus_9566#3 ------------------------------------------------------------ consensus_9566#1 ------------------------------------------------------------ consensus_9566#2 ------------------------------------------------------------ consensus_9566#0 GCGG 1329 consensus_9566#3 ---- consensus_9566#1 ---- consensus_9566#2 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||