These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_957#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence [CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGCCTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGCACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCAGCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAAGAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCAGAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGGCCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGAACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCACGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCTCAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAGCACTCAGGGAGGAGAGGAAA] [+] EMBL BM581461 [CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGCCTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGCACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCAGCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAAGAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCAGAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGGCCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGAACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCACGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCTCAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAGCACTCAGGGAGGAGAGGAAA] consensusID : consensus_957#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 173 fasta sequence [CGGGAAGAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAACCGGCAGAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG] [+] EMBL BX618053 [CGGGAAGAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAACCGGCAGAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_957#0 CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGC 60 consensus_957#1 ------------------------------------------------------------ consensus_957#0 CTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGC 120 consensus_957#1 ------------------------------------------------------------ consensus_957#0 ACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCA 180 consensus_957#1 ------------------------------------------------------------ consensus_957#0 GCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAA 240 consensus_957#1 ------------------------------------------------------CGGGAA 6 ****** consensus_957#0 GAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGAC 300 consensus_957#1 GAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGAC 66 ***************** ****************************************** consensus_957#0 GATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCA 360 consensus_957#1 GAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAACCGGCA 126 ** ******** **** * ****** * ********** ********** ****** *** consensus_957#0 GAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGG 420 consensus_957#1 GAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG------------- 173 ******** **** *** *** * **************** ***** consensus_957#0 CCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGA 480 consensus_957#1 ------------------------------------------------------------ consensus_957#0 ACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCA 540 consensus_957#1 ------------------------------------------------------------ consensus_957#0 CGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCT 600 consensus_957#1 ------------------------------------------------------------ consensus_957#0 CAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAG 660 consensus_957#1 ------------------------------------------------------------ consensus_957#0 CACTCAGGGAGGAGAGGAAA 680 consensus_957#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||