cluster # 957

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Anopheles gambiae
cluster # 957 cluster # 957 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_957#0 length = 680 sequences # 1

consensus_957#1 length = 173 sequences # 1

consensusID : consensus_957#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence

                              [CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGCCTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGCACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCAGCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAAGAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCAGAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGGCCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGAACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCACGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCTCAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAGCACTCAGGGAGGAGAGGAAA]

[+] EMBL BM581461             [CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGCCTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGCACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCAGCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAAGAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCAGAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGGCCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGAACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCACGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCTCAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAGCACTCAGGGAGGAGAGGAAA]




>consensus_957#0
CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGC
CTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGC
ACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCA
GCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAA
GAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGAC
GATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCA
GAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGG
CCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGA
ACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCA
CGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCT
CAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAG
CACTCAGGGAGGAGAGGAAA

consensusID : consensus_957#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 173
fasta sequence

                              [CGGGAAGAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAACCGGCAGAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG]

[+] EMBL BX618053             [CGGGAAGAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAACCGGCAGAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG]




>consensus_957#1
CGGGAAGAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCAT
CGAGACGAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAA
CCGGCAGAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_957#0      CCGCCCACGCGTCCGGCGCCACAATGCCGAGCAGCACGTGGCCGAGGGACCGTCCTTCGC 60
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      CTGCCAGCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCGGC 120
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      ACACGAAACGACGGTGTGCAAGATCTGCGGCAAAACGGTGAACGTCCGGTACCTGAAGCA 180
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      GCATACCGCACTGATACACGGCACAGTACGCCAGTGCTACATGTGCGATCTGTGCGGGAA 240
consensus_957#1      ------------------------------------------------------CGGGAA 6
                                                                           ******

consensus_957#0      GAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGAC 300
consensus_957#1      GAACTTTTCCAGCAGCTGGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGAC 66
                     ***************** ******************************************

consensus_957#0      GATCGAGAAGCTAGACTGTCCGCACTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCA 360
consensus_957#1      GAACGAGAAGCCAGACGGGCCGCACGGGGGCAAGCAGCCGAACGGGAAGGACAACCGGCA 126
                     ** ******** **** * ****** * ********** ********** ****** ***

consensus_957#0      GAAGCACGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGCTACCGGTGCGAGGTGTGCGG 420
consensus_957#1      GAAGCACGGGCGCCGCAGGCAGGGGGAGGCGGGCAAGAGCAACCGGG------------- 173
                     ******** **** *** *** * **************** *****              

consensus_957#0      CCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGA 480
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      ACACTTTGAGTGTGGAGAGTGTGGCAAACGGTTCAAGCAGAAGATTTACCTGACGGAGCA 540
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      CGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGCT 600
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      CAAGTCGAGGGCGAACTACTACACTCACCGGAAGACCCGGCACCGGGCAGAGTGGGTAAG 660
consensus_957#1      ------------------------------------------------------------
                                                                                 

consensus_957#0      CACTCAGGGAGGAGAGGAAA 680
consensus_957#1      --------------------