These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9573#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1802 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGCCAGCACCTACCAGCAGCAGAAGCTGCGCGTCTGCGAAGTCTGCTCGGCCTATCTGGGCATCCACGACAACGACATCCGGCTGGCGGATCACTTTGGCGGTAAGCTACATCTCGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCGGTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCCGATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCCGTGACCGGAAGGATACGAACCGTGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATGAAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATCGTAGCAGCCGCCGATCGAGAAGCCGCG-ACCGTAGCCGTGAGCGCGACCGCCACAACGATCGGCACAACGATCG-ACGCC-GGCGGTCCCGGTCACGCGAACGGTCCAGACGGTAAGCATCTATCATTCTGTAGACATCCCAAAACCACACAAAGCAGGTAGTAGCGGATAGGACTGCACAGAGAGCTGATCTGTCCGACGTTCGTGCGTGCTGCAGCCCGCACCCGATTTTAATAAACGCAATGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCT-TGTTGTGGATGGACCGCGGAACACCGATTAATTTGTAAGCATAGTTCTAACTTCATTATAATTTTTATTCAACCTTACGATATTTGTTTTTCCTAACCTACACGTCGCAAATCGTGCTAATTGGACAGTGTTGTTTAAATGAAACAATCACAGTTAGTT-AAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGTCGATTGCCCGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCACCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTTCG--TAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGT--AAGCACACAGGACACAACTGAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTTTTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTACGTGTCAAATAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BM645166 [CCGCGGACGCGTGGGCGGACGCGTGGGTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGCCAGCACCTACCAGCAGCAGAAGCTGCGCGTCTGCGAAGTCTGCTCGGCCTATCTGGGCATCCACGACAACGACATCCGGCTGGCGGATCACTTTGGCGGTAAGCTACATCTCGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCGGTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCCGATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCCGTGACCGGAAGGATACGAACCGTGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATGAAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATCGTAGCAGCCGCCGATCGAGAAGCCGCGAACCGTAGCCGTGAGCGCGACCGCCACAACGATCGGCACAACGATCGAACGCCGGGCGGTCCCGGTCACGCGAACGGTCCAG ] [+] EMBL BM647621 [ ccgACGACATCCGGCTGGCGGATCACTTTGGCGGTAAGCTACATCTGGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCGGTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCCGATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCCGTGACCGGAAGGATACGAATCGCGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATGAAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATCGTAGCAGCCGCCGATCGAGAAGCCGCG ACCGTAGCCGTGAGCGCGACCGCCACAACGATCGGCACAACGATCG ACGCC GGCGGTCCCGGTCACGCGAACGATCCAGACGGTAAGCATCTATCATTCTGTAGACATCCCAAAACCACACAAAGCAGGTAGTAGCGGATAGGACTGCACAGAGAGCTGATCTGTCCGACGTTCGTGCGTGCTGCAGCCCGCACCCGATTTTAATAAACGCAATGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCT TGTTGTGGATGGACCGCGGAACACCGATTAA ] [+] EMBL AGA282958 [ AGCCCGCANNNGATTTTAATAAACGCAATGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCTGTATTGTGGATGGACCGCGGATCACCGATTAATTTGTAAGCATAGTTCTAACTTCATTATAATTTTTATTCAACCTTACGATATTTGTTTTTCCTAACCTACACGTCGCAAATCGTGCTAATTGGACAGTGTTGTTTAAATGAAACAATCACAGTTAGTTAAAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGTCGATTTCCCGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCAT ] [+] EMBL BM633331 [ ccgGTTTTTCTTAACCTACACGTCGCAAATTTTGCTAATTGGACAGTGTTGTTTAAATGAAACAATCACAGTTAGTT AAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGTCGGTTGCTTGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATATACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCACCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTTCG TAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAA TAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTGTATTGCTG ] [+] EMBL BX614620 [ CAGTTAGTT AAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGAAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGT TTTATTGCCCGGTGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGG AGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCATCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTCCGTATAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTC ] [+] EMBL BX609043 [ TTAAACATTTAATTACACACTCTGTTCCGCTTCGTAGT TTTATTGCCCGGTGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGG AGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCATCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTCCGTATAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGT AAGCACACAGGACACAACTGAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACC ] [-] EMBL AGA281350 [ GTCGCAAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCACCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTTCG TAGGGGTAGTCTTAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATATATTGTCCATCGTTTAAAAATAATGTATCCTTGGGGAAGTGGCAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTACTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATCAGGGCTTTGTAAAGTAAAAGCACACAGGACGCAACTGAAACGCGCAATTGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTTTTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTACGTGTCAAATAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BX608015 [ GAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGT AAGCACACAGGACACAACTGAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTTTTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTA ] [+] EMBL BX613029 [ TCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACGGGCACAACTTATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATGGTCCATCGTGGAAAATTAAGGTATCCTTGGGGAAGTGGAAGCATGACTGAGGCATCTAGGCATGAAAACGAACGCT ] consensusID : consensus_9573#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 973 fasta sequence [TCCTGCAAAAATTGTACATTTCCGGCACAAAAAGTGCACCAAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTTTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATAC---AAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGT-AAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTTCAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGATTGATAAGAGAGTCATGATGATGATGATGGTGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGTACACACACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAGTTTCTAGTTGTCCGACCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTCCGGAGGTTTGGTGGTTGC] [+] EMBL BX611104 [TCCTGCAAAAATTGTACATTTCCGGCACAAAAAGTGCACCAAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTTTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATAC AAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGT AAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTTCAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTA ] [-] EMBL CNS08IQ5 [ CTGGCCTCCACCACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATTATTCCCAATACAAAAAAAAACGCAAAATACACACAATAGCCCATCCCAGGCAAAATGAGTAAAAAGGGAAAGCGGAGGTGCGTGTGCATTCTATTTGGTAAGTTGTG ] [+] EMBL AGA284502 [ TGCTCGTTGCTCTGTAGATTCGTTCAAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGATTGATAAGAGAGTCATGATGATGATGATGGTGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGTACACACACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAGTTTCTAGTTGTCCGACCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTCCGGAGGTTTGGTGGTTGC] [-] EMBL AGA285806 [ CTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGATTGATAAGAGAGTCATGATGATGATGATGGTGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGTACACACACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAGTTTCTAGTTGTCCGACCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTCCGGAGGTTT ] consensusID : consensus_9573#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 766 fasta sequence [CCGCCCACGCGTCCGAAACATTTTTGATTTTCAGGTCTTCTTGTTGTCGAATGCGTTCTCTCTCTCTCTCGTGTGCACGCGCGCTGCTCCATCAAGCAAGTTATAAATTCCTATAGTAATTTCAATCTTAACCTATTGTTCCTTTGTTTGATGTGTGCGGTCAGTGCAGCTGAAGACGCATTTCTATGCTGCGTTTAAAGTATTGCCTTTTTACAATAAGATAGCGTTAAAAAGTTTAGTTGAGTTTCCTTTTTTTTTTGTCTTTTTGGCTGCGTGTTTGTCTGTGCCTCCTGTACTAAACGATCGAGTGTTTCGTTTCTTTCCTTCTCTTCCATCTTTCCTTCGTTCTTCGTTCTTTTGTACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCT] [+] EMBL BM611966 [CCGCCCACGCGTCCGAAACATTTTTGATTTTCAGGTCTTCTTGTTGTCGAATGCGTTCTCTCTCTCTCTCGTGTGCACGCGCGCTGCTCCATCAAGCAAGTTATAAATTCCTATAGTAATTTCAATCTTAACCTATTGTTCCTTTGTTTGATGTGTGCGGTCAGTGCAGCTGAAGACGCATTTCTATGCTGCGTTTAAAGTATTGCCTTTTTACAATAAGATAGCGTTAAAAAGTTTAGTTGAGTTTCCTTTTTTTTTTGTCTTTTTGGCTGCGTGTTTGTCTGTGCCTCCTGTACTAAACGATCGAGTGTTTCGTTTCTTTCCTTCTCTTCCATCTTTCCTTCGTTCTTCGTTCTTTTGTACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAG ] [+] EMBL BX617584 [ CCTTCTCTTCCATCTTTCCTTCGTTCTTCGTTCTTTTGTACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGTGTCCGAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAATAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCT] consensusID : consensus_9573#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence [CCGGTGTGTTTTGCTTGGGTGGCGCATAGTTTTTCCTGAATTTTCCTGCAAAAACTGTACATTTCCCGCACAAAAAGTGCACCGAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTT-TTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGGCAGCACCTACCAGCAGCAGAAGCTGCGCGTC] [+] EMBL BM648183 [CCGGTGTGTTTTGCTTGGGTGGCGCATAGTTTTTCCTGAATTTTCCTGCAAAAACTGTACATTTCCCGCACAAAAAGTGCACCGAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTT TTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGGCAGCACCTACCAGCAGCAGAAGCTGCGCGTC] [+] EMBL BX466150 [ gcaagaatCCGCAC GATTG GAACCAAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTTCTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAATGTCCTAAGGTGCACGATCTGGCCCTGCGAGCAGACTACGAGAACGCATCAAAGAATAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGAC ] consensusID : consensus_9573#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 649 fasta sequence [ATCGCCGAGTTACTGCTCCTGTTACTTATCTTTCCCACTCTGTTCGGTTCTGTTCTATTTTTTACAGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATACAAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGTAAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTCAAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAG] [+] EMBL AL932959 [ATCGCCGAGTTACTGCTCCTGTTACTTATCTTTCCCACTCTGTTCGGTTCTGTTCTATTTTTTACAGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATACAAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGTAAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTCAAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 CCGCGGACGCGTGGGCGGACGCGTGGGTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGT 60 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 ATCGCAGCTCGATACCGGCCAGCACCTACCAGCAGCAGAAGCTGCGCGTCTGCGAAGTCT 120 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GCTCGGCCTATCTGGGCATCCACGACAACGACATCCGGCTGGCGGATCACTTTGGCGGTA 180 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 AGCTACATCTCGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCG 240 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCC 300 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCC 360 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GTGACCGGAAGGATACGAACCGTGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATG 420 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 AAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATC 480 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GTAGCAGCCGCCGATCGAGAAGCCGCGACCGTAGCCGTGAGCGCGACCGCCACAACGATC 540 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GGCACAACGATCGACGCCGGCGGTCCCGGTCACGCGAACGGTCCAGACGGTAAGCATCTA 600 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 --------------------TCCTGCAAAAATTGTACATTTCCGGCACAAAAAGTGCACC 40 consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 TCATTCTGTAGACATCCCAAAACCACACAAAGCAGGTAGTAGCGGATAGGACTGCACAGA 660 consensus_9573#2 -----------------------------------------------CCGCCCACGCGTC 13 consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 AAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATG 100 consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GAGCTGATCTGTCCGACGTTCGTGCGTGCTGCAGCCCGCACCCGATTTTAATAAACGCAA 720 consensus_9573#2 CGAAACATTTTTGATTTTCAGGTCTTCTTGTTGTCGAATGCGTTCTCTCTCTCTCTCGTG 73 consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 GGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTA 160 consensus_9573#4 ------------------------------------------ATCGCCGA-GTTACTGCT 17 consensus_9573#0 TGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCTTGTTGTGGATGGAC 780 consensus_9573#2 TGCACG----CGCGCTGCTCCATCAAGCAAGTTATAAATTCCTATAGTAATTTCAATCTT 129 consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 TGTAAG----AGTTTTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCAC-GACGT 215 consensus_9573#4 CCTGTT----ACTTATCTTTCCCACT-CTGTTCG-GTTCTGTTCTATTTTTTACAGACGT 71 consensus_9573#0 CGCGGAACACCGATTAATTTGTAAGCATAGTTCTAACTTCATTATAATTTTTATTCAACC 840 consensus_9573#2 AACCTATTGTTCCTTTGTTTGATGTGTGCGGTCAGTGCAGCTGAAGACGCATTTCTATGC 189 consensus_9573#3 ---------CCGGTGTGTTTTGCTTGGGTGGC--GCATAGTTTTTCCTGAATTTTCCTGC 49 consensus_9573#1 CGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAA-TAAAAATCATTCCCAATAC 274 consensus_9573#4 CGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAA-TAAAAATCATTCCCAATAC 130 consensus_9573#0 TTACGATATTTGTTTTTCCTAACCTACACGTCGCAAATCGTGCTAATTGGACAGTGTTGT 900 * * * * consensus_9573#2 TGCGTTTAAAGTAT-TGCCTTTTTACAATAAGATAGCGTTAAAAAGTTTAGTTGAGTTT- 247 consensus_9573#3 AA-----AAACTGT-ACATTTCCCGCACAAAAAGTGCACCGAAGCGAGCGGCAACATGT- 102 consensus_9573#1 AA-----AAAACGC-AAGATACACACAATA-GCCCATACCAGGCAAAATGAGTAAAAGG- 326 consensus_9573#4 AA-----AAAACGC-AAGATACACACAATA-GCCCATACCAGGCAAAATGAGTAAAAGG- 182 consensus_9573#0 TTAAATGAAACAATCACAGTTAGTTAAAAAAAAACTTCTTGTAAAATGGAACCAATTTCA 960 *** * * * consensus_9573#2 -CCTTTTTTTTTTGTCTTTTTG-GCTGCGTGTTTGTCTG-TGCCTCCTGTACTAAACGAT 304 consensus_9573#3 -CGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGC 161 consensus_9573#1 -GAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGC 385 consensus_9573#4 -GAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGC 241 consensus_9573#0 ATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGT 1020 * * * * * consensus_9573#2 CGAGTGTTTCGTTTCTT--TCCTTCTCTTCCATCTTTC-CTTCGTTCTTCGTTCTTTTGT 361 consensus_9573#3 GAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAA-AGTATGTAAGAGTTTTTTATT 220 consensus_9573#1 AGGAAACCACAAGCCGTAAGCAAA--CCAAAATAATAA-AAAAAACCAAT-TTGTCGAAT 441 consensus_9573#4 AGGAAACCACAAGCCGTAAGCAAA--CCAAAATAATAA-AAAAAACCAAT-TTGTCGAAT 297 consensus_9573#0 CGATTGCCCGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGAT 1080 * * consensus_9573#2 ACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGT-GTCCT 420 consensus_9573#3 AGGCTGCTGC-CCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAGT-GTCCT 278 consensus_9573#1 AACTAGATGT-GTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTT-CGCTT 499 consensus_9573#4 AACTAGATGT-GTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTT-CGCTT 355 consensus_9573#0 GGGTTATTAG--TGCATAACAATTTGCGAGTGTATCGT-TGCATCGTGCTGTGTCGTCGC 1137 * * * * * * consensus_9573#2 AAGGTGCAC-GATCTGGCCCTGCGAGCGGACTACGAAA-ATGCATCAAAGAACAAGGACT 478 consensus_9573#3 AAGGTGCAC-GATCTGGCCCTGCGAGCGGACTACGAAA-ATGCATCAAAGAACAAGGACT 336 consensus_9573#1 AGGG--GAG-GGCC--ACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTG 554 consensus_9573#4 AGGG--GAG-GGCC--ACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTG 410 consensus_9573#0 AAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGA 1197 * * ** * * * * * consensus_9573#2 ACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGA-TCGT 537 consensus_9573#3 ACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGA-TCGT 395 consensus_9573#1 CTCGTTGCTCTGTAGATTCGTTTCAGCA--AGCAAATCGCAATCGCCTGCACCCACTCGC 612 consensus_9573#4 CTCGTTGCTCTGTAGATTCGTTCAAGCA--AGCAAATCGCAATCGCCTGCACCCACTCGC 468 consensus_9573#0 ACCACCTCTGAGT--ATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAA-AAAT 1254 ** ** * * * ** * * * * consensus_9573#2 CGCACGGAGGCGGCCAAG--AAACG-GCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAG 594 consensus_9573#3 CGCACGGAGGCGGCCAAG--AAACG-GCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAG 452 consensus_9573#1 GTTATGATAAGAAACGAACTAGTCC-GATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAA 671 consensus_9573#4 GTTATGATAAGAAACGAACTAGTCC-GATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAA 527 consensus_9573#0 CTTACGTAGTTCGTAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAA--AAT 1312 * * * * * * * * consensus_9573#2 GTGGCCG-CCAAAGCGAACGCAGT---GCACGAGCTGGCGGAGGAAAT-CGGTAAGAAAC 649 consensus_9573#3 GTGGCCG-CCAAAGCGAACGCAGT---GCACGAGCTGGCGGAGGAAAT-CGGTAAGAAAC 507 consensus_9573#1 GCAACCATCCTTCTTTAACGCACT---GATTGATAAGAGAGTCATGAT-GATGATGATGG 727 consensus_9573#4 GCAACCATCCTTCTTTAACGCACT---G-------------------------------- 552 consensus_9573#0 GGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGT 1372 * * * * * * consensus_9573#2 TTGCTAAAGCG------GAGGCTCTAGGTGAGGCGGGACAGGTGGA-GGAAAGCATGAAG 702 consensus_9573#3 TTGCTAAAGCG------GAGGCTCTAGGTGAGGCGGGACAGGTGGA-GGAAAGCATGAAG 560 consensus_9573#1 TGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGT-ACACACACTGTAC 786 consensus_9573#4 ---------------------------------------------------------TAC 555 consensus_9573#0 TTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATC 1432 consensus_9573#2 CTGATGTCGGAGAT-CGAGGAGCTGCGGTCGGAGAAGACGCGCGCC-----GAGCAGGAG 756 consensus_9573#3 CTGATGTCGGAGAT-CGAGGAGCTGCGGTCGGAGAAGACGCGCGCC-----GAGCAGGAG 614 consensus_9573#1 CCAAACTCACATCT-CTTG-ACCGCTACTCAAAGAAATCCTTTAAC-----AGTACATCC 839 consensus_9573#4 CCAAACTCACATCT-CTTG-ACCGCTACTCAAAGAAATCCTTTAAC-----AGTACATCC 608 consensus_9573#0 CTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAG 1492 * ** * * * * * * consensus_9573#2 TATCGCA-GCT------------------------------------------------- 766 consensus_9573#3 TATCGCA-GCTCGATACCGGG-CAGCACCTAC----CAGCAGCAGAAGCTGCGCGTC--- 665 consensus_9573#1 TGTCGCCCGCTCATTACCCGCTCTCCAACGAT----GCCAAGCAGTTTCTAGTTGTCCGA 895 consensus_9573#4 TGTCGCCCGCTCATTACCCGCTCTCCAACGAT----GCCAAGCAG--------------- 649 consensus_9573#0 CATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAA 1552 * * * consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 CCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTC 955 consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 TTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGTAAGCACACAGGACACAACT 1612 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 CGGAGGTTTGGTGGTTGC------------------------------------------ 973 consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 GAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAA 1672 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 TAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTT 1732 consensus_9573#2 ------------------------------------------------------------ consensus_9573#3 ------------------------------------------------------------ consensus_9573#1 ------------------------------------------------------------ consensus_9573#4 ------------------------------------------------------------ consensus_9573#0 TTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTACGTGTCAAATAAAAAAAAAAAA 1792 consensus_9573#2 ---------- consensus_9573#3 ---------- consensus_9573#1 ---------- consensus_9573#4 ---------- consensus_9573#0 AAAAAAAAAA 1802 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||