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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9580#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1468 fasta sequence
[AAAAAATTAAAAGCAAAATGTAAACAAAACGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG-----AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG-AAACTG-G-TTGTGCG-AAAG-GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG-ACGCTTCACTAGTGGTGTAATAGCGCT-GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG-GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA-CGGGCCACCATCAGTCACATAGGTTC-GGAAAAGATCGGCCGTTTGCTG-GCCGCAATACAGGCG-TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG-TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC-GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT-CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT-CGAGGTTGCCGCGTCCAACCCCTGTGACGG-ACGCAAAAGTGAAATTGAGTTGTAATTTAAACAGTTCGTTCATGCATTTGTTACAAGGTTCGCGCAGTTTGCCATGCCGACAATGTTTCGCGCGCGCATTGCATTCAGTTAAAAATAGAAACTCCGGTGAGAAACAGAAATAAAGTGCCGGTAAGCGCCCGTGT]
[+] EMBL CNS09CXH [AAAAAATTAAAAGCAAAATGTAAACAAAACGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCGTTCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGC ]
[+] EMBL CNS08T5M [ AAACGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCGAGGTAAGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGAAA AAAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGGAGATTCGCTGCTTAAAAAGGACTGGA ]
[+] EMBL CNS09B1X [ aattCGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAATTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACACTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGA ]
[+] EMBL CNS08ETZ [ caAACGGAAAATTAC AAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACC ]
[+] EMBL BX603214 [ GGAAAATTACAAAACATAAACCGAAAAATACACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATTTAAACGGTGTGGTGAATCTGTACAAACCAGCCGGAGTAACGGTGCAGCAAGTTCGGAACACCATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAGCGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTAACGGGGCCTCGCTACCAGCCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGAACGAACCTTGCCTTCCGACTGCAACAGAACCGTCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGC ]
[+] EMBL CNS08HGC [ ATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCGAGGTAAGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACAC ]
[+] EMBL BX619527 [ TGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATTTAAACGGTGTGGTGAATCTGTACAAACCAGCCGGAGTAACGGTGCAGCAAGTTCGGAACACCATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAGCGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTAACGGGGCCTCGCTACCAGCCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGAACGAACCTTGCCTTCCGACTGCAACAGAACCGTCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTNC GGAAAAGATCGGCCGTTGGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACGTACAGTCGCAGGCCGNCTACGAGCTAGCGTGCA ]
[+] EMBL BX624803 [ CATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATTTAAACGGTGTGGTGAATCTGTACAAACCAGCCGGAGTAACGGTGCAGCAAGTTCGGAACACCATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAGCGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTAACGGGGCCTCGCTACCAGCCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGAACGAACCTTGCCTTCCGACTGCAACAGAACCGTCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCACCGGGCCACCATCAGTCACATAGGTTCNGGAAAAGATCGGCCGTTTGCTG GCCGCAA ]
[+] EMBL CNS09323 [ ACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGACGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAG ]
[+] EMBL CNS08PKU [ CGATGCGCAAACTGCGCTTGTGCGCAAAGCGTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGGCACGCTTCACTAGTGGTGTAATAGCGCTGGGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGA CGGATTCCTGGGAAAGCGCCACGGAGACACACTTTGCCGATTCGCGAGTTACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTGCGCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACG ]
[-] EMBL CNS09B1Y [ GAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCCACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAAACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATAAACTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGGACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTTCCTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGATACGAGGTTGCCGCGTCCAACCCCTGTGACGG CACAAAA ]
[-] EMBL CNS09324 [ GTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTC CTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CCAGct ]
[-] EMBL CNS08T5N [ CGGGTGACCGGATTCCTGGGAAAG GCCACGGAAACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATAAGTTACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TTACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAGTTTTTGGAAACCTTTTTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGGACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCTGTGACGG ACGCAAAAGTTAA ]
[-] EMBL CNS08EU0 [ GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGAACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCTGTGACGGCACGCAAAGTTGGCATTGAGTTGTAATTTAAACAGTTCGTTCATGCATTTGTTACAAGGTTCGCGCAGTTTGCCATGCCGACAATGTTTCGCGCGCGCATTGCATTCAGTTAAAAATAGAAACTCCGGTGAGAAACAGAAATAAAGTGCCGGTAAGCGCCCGTGT]
[-] EMBL CNS09CXI [ GAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATACGGGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCTGTGACGA ACGCAAAAaaaaaaaa ]
[-] EMBL CNS08PKV [ gaACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT TTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCT ]
[-] EMBL CNS08HGD [ CTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTG ]
consensusID : consensus_9580#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence
[GGTGTAATAGTGCTGGAAGAATCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCATCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCCTTGCAAGGAATGGAAGAGTAGGCCCAGACAGCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACACCACACACTGCACACCATTTGTGT]
[+] EMBL BX607888 [GGTGTAATAGTGCTGGAAGAATCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCATCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCCTTGCAAGGAATGGAAGAGTAGGCCCAGACAGCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACACCACACACTGCACACCATTTGTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9580#0 AAAAAATTAAAAGCAAAATGTAAACAAAACGCAGAACGGAAAATTACAAAACATAAACCA 60
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 AAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAG 120
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 GACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGA 180
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 GTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCGAGATTTAAACCAA 240
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCGAAACTG 300
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 GTTGTGCGAAAGGTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAA 360
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGGACGCTTCACTAGTGGTGTAATA 420
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 GCGCTGGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTG 480
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CGGGTGTACCGGGTGACCGGATTCCTGGGAAAGGCCACGGAGACACACTTTGCCGATTCG 540
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CGAGTAACGGCACGGGCCACCATCAGTCACATAGGTTCGGAAAAGATCGGCCGTTTGCTG 600
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 GCCGCAATACAGGCGTCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAG 660
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 TCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTA 720
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CCAATGATATACGGCATACGGCTGGCAGAGTATCGGAAACCTTTCTTTACCATCGAAATT 780
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAAC 840
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATACGGCACGGCCATTTTCTGCTG 900
consensus_9580#1 ---------------------------------------------GGTGTAATAGTGCTG 15
** * *****
consensus_9580#0 GAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACAC 960
consensus_9580#1 GAAGAATCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCATCAGCGGCATGGCACAC 75
***** ************************************ *****************
consensus_9580#0 ACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAA 1020
consensus_9580#1 ACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCCTTGCAA 135
***************************************************** ******
consensus_9580#0 GGAATGGAAGAGTAG-CCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGA 1079
consensus_9580#1 GGAATGGAAGAGTAGGCCCAGACAGCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGA 195
*************** ******** ***********************************
consensus_9580#0 ACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTT 1139
consensus_9580#1 ACTGTGGGCGTAACACCCACGACACCACACACTGCACACCATTTGTGT------------ 243
************************ ******************* **
consensus_9580#0 AATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTTCTTTTACATGTGTTCATTGTTTATGA 1199
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 TCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCA 1259
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 CGTGCAATAAATGATCGAGGTTGCCGCGTCCAACCCCTGTGACGGACGCAAAAGTGAAAT 1319
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 TGAGTTGTAATTTAAACAGTTCGTTCATGCATTTGTTACAAGGTTCGCGCAGTTTGCCAT 1379
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 GCCGACAATGTTTCGCGCGCGCATTGCATTCAGTTAAAAATAGAAACTCCGGTGAGAAAC 1439
consensus_9580#1 ------------------------------------------------------------
consensus_9580#0 AGAAATAAAGTGCCGGTAAGCGCCCGTGT 1468
consensus_9580#1 -----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||