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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9587#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2347 fasta sequence
[CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTG-CCGTACGTCGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCG-GTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGTAACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTAATGATTGGTGGCAGCGTATTCTACGAACTCTG--TTTTTTTTTTCATCCCCAAGAAATGTATGCCTCATTGCTTTCTTTGCAGTGTGAGCCAATGCTTTCCTTCTCCACTCCACCCCAAAGTTTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTGCCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGGGGTATCCAGTGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGTGGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTATATGTTAATAATGTG]
[+] EMBL BM599118 [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAG ]
[+] EMBL BM632121 [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGTTCGACGCTGACCGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCA ]
[+] EMBL BM655861 [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAG ]
[+] EMBL BM596093 [ ccgGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACG ]
[+] EMBL BM656658 [ CCGAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAATATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACAGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTTGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGa ]
[+] EMBL BM621264 [ ccgGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCG ]
[+] EMBL BM657502 [ ccgGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGG ]
[+] EMBL BM638439 [ acgcgtccgCGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTGACCGTACGTCGGC ]
[+] EMBL BM581167 [ ccgGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTG CCGTACGTCGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCG GCGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCGCCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTAGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATG ]
[+] EMBL BX614904 [ TCCGCTCGAAGTAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCATCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTG CCGTACGTTGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCG GTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAATGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTTTCG ]
[+] EMBL BX608937 [ GAGCCAGATCATGCTCGAGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGTAACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTAATGATTGGTGGCAGCGTATTCTACGAACTCTG T ]
[+] EMBL BX615612 [ ACTGGGTGAGCTGTGCTCGCGCATTCATGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCTCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGTAACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAG ]
[+] EMBL BM585045 [ CCGCCTCCTTCTATCCCCGATCCCGCCAAACGC TGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTAATGATTGGTGGCAGCGTATTCTACGAACTCTG TTTTTTTTTCATCCCCAAGAAATGTATGCCTCATTGCTTTCTTTGCAGTGTGAGCCAATGCTTTCCTTCTCCACTCCACCCCAAAGTTTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTGCCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGGGGTATCCAGTGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGTGGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTATATGTTAATAATGTG]
[+] EMBL BM577835 [ ccGCTATACCAAGGGTTGTATAAAGTGATTAATGATTGGTGGCAGCGTATTCTACGAACTCTGTTTTTTTTTTTTCATCCCCAAGAAATATATGCCTCATTGCTTTCTTTGCAGTGTGAGCCAATCCTTTCCTTCTCCACTCCACCCCAAAGTTTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTGCCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGGGGTATCCAGAGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGTGGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTATATGTTAATAATGTG]
consensusID : consensus_9587#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 700 fasta sequence
[CCGCGGACGCGTGGGCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCA]
[+] EMBL BM618454 [CCGCGGACGCGTGGGCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCA]
consensusID : consensus_9587#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 619 fasta sequence
[GAATTGCCGAGGTTTAAATACGTCGACGCCGCTCTACTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCACGGATCAGGTGTACAAGCGGTTGGCGCANCTGCGCC]
[+] EMBL AL930583 [GAATTGCCGAGGTTTAAATACGTCGACGCCGCTCTACTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCACGGATCAGGTGTACAAGCGGTTGGCGCANCTGCGCC]
[+] EMBL BM601443 [ AGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACACTGACGGCTGCGCTCGATGCGAACAAGCACAG ]
consensusID : consensus_9587#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence
[ATTGCCCGAGGGTTTTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCATCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACACTGCGTGGTGATCAAGTACGTGCCGTACGTTGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCGGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCAACCCGCTCATCCTCGATCTGGCCATACTGGCGCTGCAGCTGTGCTCGNCNCATACAGAGTT]
[+] EMBL AL695922 [ATTGCCCGAGGGTTTTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCATCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACACTGCGTGGTGATCAAGTACGTGCCGTACGTTGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCGGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCAACCCGCTCATCCTCGATCTGGCCATACTGGCGCTGCAGCTGTGCTCGNCNCATACAGAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9587#1 --------CCGCGGACGCGTGGGCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCAC 52
consensus_9587#2 -----------GAATTGCCGAGGTTTAAATA--CGTCGACGCCGCTCTAC-TGGGCTCAC 46
consensus_9587#0 CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCAC 60
consensus_9587#3 ----------------------------------------ATTGCCCGAG--GGTTTTAC 18
** * * ** * **
consensus_9587#1 ACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGT 112
consensus_9587#2 ACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGT 106
consensus_9587#0 ACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGT 120
consensus_9587#3 ATCAACGGATCG--CCCCAGAA-------CACGTTCGTGCCCGGTGTG-ATCGAG-ATGG 67
* * * * * * * ** ** **** * * *** *** * ***
consensus_9587#1 CCTCAGAGCTGAAGGTACTTTCGCCG--AACGTCCACTACACGGACGAACACATCGAGGT 170
consensus_9587#2 CCTCAGAGCTGAAGGTACTTTCGCCG--AACGTCCACTACACGGACGAACACATCGAGGT 164
consensus_9587#0 CCTCAGAGCTGAAGGTACTTTCGCCG--AACGTCCACTACACGGACGAACACATCGAGGT 178
consensus_9587#3 CGG-AGCACT-ACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCT 125
* ** ** * *** * *** * ** *** ** * * ** * * ** *
consensus_9587#1 GGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGC-CCAAGCGGATACACGGTGA 229
consensus_9587#2 GGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGC-CCAAGCGGATACACGGTGA 223
consensus_9587#0 GGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGC-CCAAGCGGATACACGGTGA 237
consensus_9587#3 GAAGT--CGGTGCTGGTGGACTTCC-TGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGT 182
* * * * ** * *** ** ***** **** ***** * *
consensus_9587#1 AACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGA 289
consensus_9587#2 AACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGA 283
consensus_9587#0 AACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGA 297
consensus_9587#3 GAGCTACAACCATC----TCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGC-AG 237
* ** *** * * * ** * * *** *** ** ** * * **
consensus_9587#1 TGCTGGTCGGCTGGGG-CGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAAC 348
consensus_9587#2 TGCTGGTCGGCTGGGG-CGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAAC 342
consensus_9587#0 TGCTGGTCGGCTGGGG-CGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAAC 356
consensus_9587#3 TTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTG--GACGA-TATGGTCGCATCCAAC 294
* * * *** * * * *** * * * * * **** * * *** * ***
consensus_9587#1 AAGCACAGCCTGGAATG-GCGCACG--CGTCAGGGCGTCCAGCAGGCGAACTGGTACGGC 405
consensus_9587#2 AAGCACAGCCTGGAATG-GCGCACG--CGCCAGG-CGTCCAGCAGGCGAACTGGTACGGC 398
consensus_9587#0 AAGCACAGCCTGGAATG-GCGCACG--CGCCAGGGCGTCCAGCAGGCGAACTGGTACGGC 413
consensus_9587#3 ---CACATCCTGTACGGTGCGGACGAACATCCGGACACTGCGT-GGTGATCAAGTACGTG 350
**** **** * * *** *** * * ** * * ** ** * *****
consensus_9587#1 TCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTAC 465
consensus_9587#2 TCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTAC 458
consensus_9587#0 TCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTAC 473
consensus_9587#3 CCG--TACGTTGGCGACAGCAAGCGCGCGATGGACGAGTAC-ACGAGCCAGATCATG--- 404
** *** * ** * * ** * ** * * * *** **
consensus_9587#1 ATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGG 525
consensus_9587#2 ATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGG 518
consensus_9587#0 ATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGG 533
consensus_9587#3 --CTCGGTGGTCACAACA----CGCTGGTCATCC---ACAATACCTGCGAGGACTCGCTG 455
* ** ** * ** ****** ** ** *** * ** ** * *
consensus_9587#1 GACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGG 585
consensus_9587#2 GACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGG 578
consensus_9587#0 GACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGG 593
consensus_9587#3 CTCGCCAACCCGCTCATCCTCGATCTGGCCAT---ACTGGCGCTGCAGCTGT-GCTCGNC 511
* * * ****** * *** *** ** * ***** * **** * ***
consensus_9587#1 CTGCA-GGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGA 644
consensus_9587#2 CTGCACGGATCAGGTGTACAAGCGGTTGGCGCANCTGCGCC------------------- 619
consensus_9587#0 CTGCA-GGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGA 652
consensus_9587#3 NCATACAGAGTT------------------------------------------------ 523
* **
consensus_9587#1 TCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCA---- 700
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 TCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCG 712
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGT 772
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGG 832
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTC 892
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATC 952
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCAT 1012
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 TGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCT 1072
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGA 1132
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGT 1192
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCA 1252
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CTGCGTGGTGATCAAGTACGTGCCGTACGTCGGCGACAGCAAGCGCGCGATGGACGAGTA 1312
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CACGAGCCAGATCATGCTCGGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGA 1372
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCG 1432
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGT 1492
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 ACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGT 1552
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCT 1612
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCA 1672
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 ACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAA 1732
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGC 1792
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGT 1852
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 AACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTC 1912
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 ATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTA 1972
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 ATGATTGGTGGCAGCGTATTCTACGAACTCTGTTTTTTTTTTCATCCCCAAGAAATGTAT 2032
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GCCTCATTGCTTTCTTTGCAGTGTGAGCCAATGCTTTCCTTCTCCACTCCACCCCAAAGT 2092
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 TTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTG 2152
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 CCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGG 2212
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GGTATCCAGTGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGT 2272
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ------------------------------------------------------------
consensus_9587#2 ------------------------------------------------------------
consensus_9587#0 GGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTA 2332
consensus_9587#3 ------------------------------------------------------------
consensus_9587#1 ---------------
consensus_9587#2 ---------------
consensus_9587#0 TATGTTAATAATGTG 2347
consensus_9587#3 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||