These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9587#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2347 fasta sequence [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTG-CCGTACGTCGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCG-GTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGTAACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTAATGATTGGTGGCAGCGTATTCTACGAACTCTG--TTTTTTTTTTCATCCCCAAGAAATGTATGCCTCATTGCTTTCTTTGCAGTGTGAGCCAATGCTTTCCTTCTCCACTCCACCCCAAAGTTTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTGCCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGGGGTATCCAGTGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGTGGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTATATGTTAATAATGTG] [+] EMBL BM599118 [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAG ] [+] EMBL BM632121 [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGTTCGACGCTGACCGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCA ] [+] EMBL BM655861 [CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAG ] [+] EMBL BM596093 [ ccgGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACG ] [+] EMBL BM656658 [ CCGAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAATATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACAGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTTGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGa ] [+] EMBL BM621264 [ ccgGCCTGGAATGGCGCACGCGCCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCG ] [+] EMBL BM657502 [ ccgGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCGGTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGTGGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGG ] [+] EMBL BM638439 [ acgcgtccgCGGAGCGGTTCGCCGAGGTGAAGGAAGGCGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTCGCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTGACCGTACGTCGGC ] [+] EMBL BM581167 [ ccgGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTG CCGTACGTCGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCG GCGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCGCCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTAGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATG ] [+] EMBL BX614904 [ TCCGCTCGAAGTAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCATCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCACTGCGTGGTGATCAAGTACGTG CCGTACGTTGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCG GTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAATGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTTTCG ] [+] EMBL BX608937 [ GAGCCAGATCATGCTCGAGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCGCATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGTAACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTAATGATTGGTGGCAGCGTATTCTACGAACTCTG T ] [+] EMBL BX615612 [ ACTGGGTGAGCTGTGCTCGCGCATTCATGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGTACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGTCAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCTGCCGCCTCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCAACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAAGTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGCGGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGTAACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAG ] [+] EMBL BM585045 [ CCGCCTCCTTCTATCCCCGATCCCGCCAAACGC TGAATGGTTTCATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTAATGATTGGTGGCAGCGTATTCTACGAACTCTG TTTTTTTTTCATCCCCAAGAAATGTATGCCTCATTGCTTTCTTTGCAGTGTGAGCCAATGCTTTCCTTCTCCACTCCACCCCAAAGTTTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTGCCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGGGGTATCCAGTGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGTGGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTATATGTTAATAATGTG] [+] EMBL BM577835 [ ccGCTATACCAAGGGTTGTATAAAGTGATTAATGATTGGTGGCAGCGTATTCTACGAACTCTGTTTTTTTTTTTTCATCCCCAAGAAATATATGCCTCATTGCTTTCTTTGCAGTGTGAGCCAATCCTTTCCTTCTCCACTCCACCCCAAAGTTTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTGCCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGGGGTATCCAGAGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGTGGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTATATGTTAATAATGTG] consensusID : consensus_9587#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 700 fasta sequence [CCGCGGACGCGTGGGCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCA] [+] EMBL BM618454 [CCGCGGACGCGTGGGCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGTCAGGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCAGGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGATCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCA] consensusID : consensus_9587#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 619 fasta sequence [GAATTGCCGAGGTTTAAATACGTCGACGCCGCTCTACTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCACGGATCAGGTGTACAAGCGGTTGGCGCANCTGCGCC] [+] EMBL AL930583 [GAATTGCCGAGGTTTAAATACGTCGACGCCGCTCTACTGGGCTCACACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGTCCTCAGAGCTGAAGGTACTTTCGCCGAACGTCCACTACACGGACGAACACATCGAGGTGGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAACAAGCACAGCCTGGAATGGCGCACGCGCCAGGCGTCCAGCAGGCGAACTGGTACGGCTCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTACATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGGGACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGGCTGCACGGATCAGGTGTACAAGCGGTTGGCGCANCTGCGCC] [+] EMBL BM601443 [ AGCAGCGGCCCAAGCGGATACACGGTGAAACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGATGCTGGTCGGCTGGGGCGGCAACAACGGCTCGACACTGACGGCTGCGCTCGATGCGAACAAGCACAG ] consensusID : consensus_9587#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence [ATTGCCCGAGGGTTTTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCATCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACACTGCGTGGTGATCAAGTACGTGCCGTACGTTGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCGGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCAACCCGCTCATCCTCGATCTGGCCATACTGGCGCTGCAGCTGTGCTCGNCNCATACAGAGTT] [+] EMBL AL695922 [ATTGCCCGAGGGTTTTACATCAACGGATCGCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCTGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTGGACGATATGGTCGCATCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACACTGCGTGGTGATCAAGTACGTGCCGTACGTTGGCGACAGCAAGCGCGCGATGGACGAGTACACGAGCCAGATCATGCTCGGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGACTCGCTGCTCGCCAACCCGCTCATCCTCGATCTGGCCATACTGGCGCTGCAGCTGTGCTCGNCNCATACAGAGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9587#1 --------CCGCGGACGCGTGGGCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCAC 52 consensus_9587#2 -----------GAATTGCCGAGGTTTAAATA--CGTCGACGCCGCTCTAC-TGGGCTCAC 46 consensus_9587#0 CCGGTTTTCGACACCGGTAGGATCTGAAATCACCGTCGACGCCGCTCTACCTGGGCTCAC 60 consensus_9587#3 ----------------------------------------ATTGCCCGAG--GGTTTTAC 18 ** * * ** * ** consensus_9587#1 ACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGT 112 consensus_9587#2 ACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGT 106 consensus_9587#0 ACACAGACACCAACCTCTAAAAGGCCGTGCAGAACCGTGACTAGCGTGCATCAAACATGT 120 consensus_9587#3 ATCAACGGATCG--CCCCAGAA-------CACGTTCGTGCCCGGTGTG-ATCGAG-ATGG 67 * * * * * * * ** ** **** * * *** *** * *** consensus_9587#1 CCTCAGAGCTGAAGGTACTTTCGCCG--AACGTCCACTACACGGACGAACACATCGAGGT 170 consensus_9587#2 CCTCAGAGCTGAAGGTACTTTCGCCG--AACGTCCACTACACGGACGAACACATCGAGGT 164 consensus_9587#0 CCTCAGAGCTGAAGGTACTTTCGCCG--AACGTCCACTACACGGACGAACACATCGAGGT 178 consensus_9587#3 CGG-AGCACT-ACGGTGCGTTCATTGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCT 125 * ** ** * *** * *** * ** *** ** * * ** * * ** * consensus_9587#1 GGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGC-CCAAGCGGATACACGGTGA 229 consensus_9587#2 GGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGC-CCAAGCGGATACACGGTGA 223 consensus_9587#0 GGACTACCAGTACCAAACGACCACCGTGGTGAGCAGCGGC-CCAAGCGGATACACGGTGA 237 consensus_9587#3 GAAGT--CGGTGCTGGTGGACTTCC-TGGTGTCGGCCGGCATCAAGCCCGTCTCGATCGT 182 * * * * ** * *** ** ***** **** ***** * * consensus_9587#1 AACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGA 289 consensus_9587#2 AACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGA 283 consensus_9587#0 AACCTGAAACTACCGAGTTGAACATCCGCACCGGACGAAATGTCCCGCGCATGGGGCTGA 297 consensus_9587#3 GAGCTACAACCATC----TCGGCAACAACGACGGCAAGAATCTCTCGGCCCCGCAGC-AG 237 * ** *** * * * ** * * *** *** ** ** * * ** consensus_9587#1 TGCTGGTCGGCTGGGG-CGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAAC 348 consensus_9587#2 TGCTGGTCGGCTGGGG-CGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAAC 342 consensus_9587#0 TGCTGGTCGGCTGGGG-CGGCAACAACGGCTCGACGCTGACGGCTGCGCTCGAGGCGAAC 356 consensus_9587#3 TTCCGCTCGAAGGAGATCTCCAAGAGCAACGTGGTG--GACGA-TATGGTCGCATCCAAC 294 * * * *** * * * *** * * * * * **** * * *** * *** consensus_9587#1 AAGCACAGCCTGGAATG-GCGCACG--CGTCAGGGCGTCCAGCAGGCGAACTGGTACGGC 405 consensus_9587#2 AAGCACAGCCTGGAATG-GCGCACG--CGCCAGG-CGTCCAGCAGGCGAACTGGTACGGC 398 consensus_9587#0 AAGCACAGCCTGGAATG-GCGCACG--CGCCAGGGCGTCCAGCAGGCGAACTGGTACGGC 413 consensus_9587#3 ---CACATCCTGTACGGTGCGGACGAACATCCGGACACTGCGT-GGTGATCAAGTACGTG 350 **** **** * * *** *** * * ** * * ** ** * ***** consensus_9587#1 TCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTAC 465 consensus_9587#2 TCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCAGCGGGCAGGATGTGTAC 458 consensus_9587#0 TCGATCACGCAGTCGTCGACGGTGCTGCTCGGATCGGACGCCACCGGCCAGGATGTGTAC 473 consensus_9587#3 CCG--TACGTTGGCGACAGCAAGCGCGCGATGGACGAGTAC-ACGAGCCAGATCATG--- 404 ** *** * ** * * ** * ** * * * *** ** consensus_9587#1 ATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGG 525 consensus_9587#2 ATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGG 518 consensus_9587#0 ATCCCGATGAACCAGCTGGTGCCGATGGTCAACCCGAACGATATCGTCGTCGATGGGTGG 533 consensus_9587#3 --CTCGGTGGTCACAACA----CGCTGGTCATCC---ACAATACCTGCGAGGACTCGCTG 455 * ** ** * ** ****** ** ** *** * ** ** * * consensus_9587#1 GACATTAGCTCGCTCAACATCGGTGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGG 585 consensus_9587#2 GACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGG 578 consensus_9587#0 GACATTAGCTCGCTCAACATCGGGGAGGCGATGAAGCGGGCGCAGGTGCTGGAGGTCGGG 593 consensus_9587#3 CTCGCCAACCCGCTCATCCTCGATCTGGCCAT---ACTGGCGCTGCAGCTGT-GCTCGNC 511 * * * ****** * *** *** ** * ***** * **** * *** consensus_9587#1 CTGCA-GGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGA 644 consensus_9587#2 CTGCACGGATCAGGTGTACAAGCGGTTGGCGCANCTGCGCC------------------- 619 consensus_9587#0 CTGCA-GGATCAGGTGTACAAGCGGTTGGCGCAGCTGCGCCCAAGGGCCTCGATCTACGA 652 consensus_9587#3 NCATACAGAGTT------------------------------------------------ 523 * ** consensus_9587#1 TCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCA---- 700 consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 TCCCGACTTCATTGCGGCCAACCAGGCGGACCGGGCGGACAACACGATCAAGGGCACGCG 712 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GTACGAGCAGTACCAGCAGATCGTGCGGGACATTCGCGAGTTCAAGCAGCAGTCGGGCGT 772 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GGACAAGGTGGTCATCCTGTGGACGGCAAATACGGAGCGGTTCGCCGAGGTGAAGGAAGG 832 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CGTCAACACGACGATGGCGGATCTGGAGCGCTCGCTCAAGCAGAACCATTCGGAGATTTC 892 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GCCCTCGACGATCTTCGCCATGGCTGCTATTGCTGAGAATTGCATCTACATCAACGGATC 952 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GCCCCAGAACACGTTCGTGCCCGGTGTGATCGAGATGGCGGAGCACTACGGTGCGTTCAT 1012 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 TGCCGGCGATGACTTCAAGTCGGGCCAGACCAAGCTGAAGTCGGTGCTGGTGGACTTCCT 1072 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GGTGTCGGCCGGCATCAAGCCCGTCTCGATCGTGAGCTACAACCATCTCGGCAACAACGA 1132 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CGGCAAGAATCTCTCGGCCCCGCAGCAGTTCCGCTCGAAGGAGATCTCCAAGAGCAACGT 1192 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GGTGGACGATATGGTCGCCTCCAACCACATCCTGTACGGTGCGGACGAACATCCGGACCA 1252 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CTGCGTGGTGATCAAGTACGTGCCGTACGTCGGCGACAGCAAGCGCGCGATGGACGAGTA 1312 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CACGAGCCAGATCATGCTCGGTGGTCACAACACGCTGGTCATCCACAATACCTGCGAGGA 1372 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CTCGCTGCTCGCCACCCCGCTCATCCTCGATCTGGCCATACTGGGTGAGCTGTGCTCGCG 1432 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CATTCAGGTTCGCCGCAAGGACGCCGCGGCCAGCGGTGAGTACCTACCCTTCCGGTCGGT 1492 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 ACTGTCGCTGCTGAGCTACCTGTGCAAGGCACCGCTAGTGCCGCAGGGTACGCCCGTGGT 1552 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CAATTCGCTCTTCCGCCAGCGAACGGCAATCGAGAACATTCTGCGTGCGTGCGTCGGTCT 1612 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GCCGCCGCTCAGCCACATGACGCTGGAGCACCGTTTCGATCTGCCGGTCGGGGAGAGCCA 1672 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 ACCGGACGTGCAGCAGCATGTTGCGAAGAAGGCACGCGTCGCCAACGGCACCGCGGAGAA 1732 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GTGCAATGGCGTGCACAATGGGGACGCTCATCCTTCGGAGGAAGTTGCCAGCCGCTAAGC 1792 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GGAGTAGAGCGTGCTTAGTGCAACACTTTTTTTTGTCGAGACGCATTACGTATGATGCGT 1852 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 AACTATTAACCCCACCCACCCCCTTTTATCCCCGATCCCGCCAATCGCATGAATGGTTTC 1912 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 ATTTTGCATAAAGAGATCCCCATTATTGATAGCTATACCAAGGGTTGTATAGAGTGTTTA 1972 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 ATGATTGGTGGCAGCGTATTCTACGAACTCTGTTTTTTTTTTCATCCCCAAGAAATGTAT 2032 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GCCTCATTGCTTTCTTTGCAGTGTGAGCCAATGCTTTCCTTCTCCACTCCACCCCAAAGT 2092 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 TTCTGATTCAGGAAATGTATTAAAAGTGCAAAACCGCAAAAGAACTGAGCTGAACGTGTG 2152 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 CCACAAGGCAGCCAAATTGTGACAAAACAGACAGGCCGATACCGATACCCATTTGCGCGG 2212 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GGTATCCAGTGGTACCAACCTATTTCCTTTCCCATTTGGAAGTTTATTCAACCGCTTAGT 2272 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 ------------------------------------------------------------ consensus_9587#2 ------------------------------------------------------------ consensus_9587#0 GGTAAGAATTCGTAAACATATACTATGTAAGCGTTTATGAAGAAAAAGAAAATAAAGCTA 2332 consensus_9587#3 ------------------------------------------------------------ consensus_9587#1 --------------- consensus_9587#2 --------------- consensus_9587#0 TATGTTAATAATGTG 2347 consensus_9587#3 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||