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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1074 fasta sequence
[TAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGATTGTCATAGCAATCCAGACATACTCGCAG-GGTTTATTGCTCTGNCCTGGTAGAATAAATTTTTTCGACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTC-ACTATCC-GGAA-CCCA-TA-CA-GCAGC-ATGTG---TTTCAA--C-TGG-TTTC-TTGCC--GCT-CTTG-CG-CAAT-AAAT--CTTC-TAT-GCA-CTT-GTT-GATGTGTGCC--ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC-AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC-GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTTGCTGACCGGCCGATTCTTGCCT]
[+] EMBL CNS08CUN [TAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGATTGTCATAGCAATCCAGACATACTCGCAG GGTTTATTGCTCTGGCCTGGTAGAATAAATTTTTTCGACGAACAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTATTTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA CATGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCAAAAAGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTTAGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGGGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAAT ]
[+] EMBL CNS08IGS [ ACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTTACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGA ]
[-] EMBL BX626857 [ tTCCTGAATCATTTTC CCTGAGNTTTCAGTAGAG TAGCTGG TTG TG TG TNCCGGCAAGTGCTTNG TTCCGTCACGCTTCATTGATGNGAGATTGTCATAGCAATCCAGACATACTCGCAG AGGTTATTGCTCTGNCCTGGTAGAATAAA TTTTTCGACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTATTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCA ]
[-] EMBL BX626797 [ TCATAGCAATCCAGACATACTCGCAGAGGTTTATTGCTCTGNCCTGGTAGAATAAATTTTTTCGACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCG CTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATC ]
[-] EMBL CNS08IGR [ TTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACTACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATT GC TCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTG TTTGATAATTGATCAGTCGCTGC ]
[-] EMBL BM645517 [ ATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTcgg ]
[-] EMBL BM619683 [ GCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTTGCTGACCGG ]
[-] EMBL BX468314 [ cCTTCAACTATCCGGGAACCCCATTACCAGGCAGCAATGTGGTNTTTCAAACCTTGGTTTTCTTTGCCCGGTTCCTTGCCGCCAATGAGATTGCTTCTTATGGCACCTTGGTTGGATGTGTGCCCAATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTGCCCTACGTGCCGATTCTTGCCT]
[-] EMBL CNS08CUM [ GAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT TTT TATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCTAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATT GCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTTGCTGAttg ]
[-] EMBL BX620922 [ A CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTT ]
consensusID : consensus_9594#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 662 fasta sequence
[ATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCA-T-CCATTCC--TGCTTCT-CTGT-TTGTGTCGCAGCATA-CA-CAGC-AAACGACTTA-GT-CGC-TGTA-CGTA-TCAGCCA-T-CCATTC-CGGTA-CTGACCA-TTA-TCTTCCAGTGCTTGCAGTTGGACTT-CTT-CGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATA-TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAA-AACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG]
[-] EMBL BM590873 [ATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCA T CCATTCC TGCTTCT CTGT TTGTGTCGCAGCATA CA CAGC AAACGACTTA GT CGC TGTA CGTA TCAGCCA T CCATTC CGGTA CTGACCA TTA TCTTCCAGTGCTTGCAGTTGGACTT CTT CGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATA TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAA AACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG]
[-] EMBL AL695379 [ GTGTGCCAGTGCCAGTNCGGGGNTTGTNNTGTGTTGTGTCGCAGCATAGCAGCAGCGNAGCGANTTAGGTGCGCGTGTAGCGTAGTCAGCCAGTGCCATTCGCGGTAGCTGACCAGTTAGTCTTCCAGTGCTTGCAGTTGGACTTGCTTGCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATAGTTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAA TGCCGAGACAATCCACTATATAATAAAATGAACAACCtc ]
[-] EMBL BM651766 [ TCGCAGCATA CA CAGC AAACGACTTA GT CGC TGTA CGTA TCAGCCA T CCATTC CGGTA CTGACCA TTA TCTTCCAGTGCTTGCAGTTGGACTT CTT CGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATA TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCCAACTATATTTCAAAATTGCTGAGACAATCCACTATATAATAAAATGAA AACCCGCACAGTATGCAGAATGATTAAATAAATATCCTTTTCGCTCTTcgg ]
[-] EMBL CNS09N40 [ AACAATA TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATT GCTTCG CTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAA AACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTC ]
consensusID : consensus_9594#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence
[GACGAACAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG]
[-] EMBL BM617247 [GACGAACAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG]
consensusID : consensus_9594#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence
[TCCCTGTTACGTATCAGCCATCCNATTCCGGTACCTGACCATTATCTTCCAGTGCTTGCACGCTTGGACTTCTTCGACGCGGTACTTNANCTNTNNGCTNNTCGCTTGTACTTCTTCTTGCCAATNCACAACTCATTGCCATACACCGAGNGATATCATTAAATAGGNNCCNATTGACGAGCTTTTGGNTCGTTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCCACTCGTGNCGCGATTCTTGGC]
[-] EMBL BX468199 [TCCCTGTTACGTATCAGCCATCCNATTCCGGTACCTGACCATTATCTTCCAGTGCTTGCACGCTTGGACTTCTTCGACGCGGTACTTNANCTNTNNGCTNNTCGCTTGTACTTCTTCTTGCCAATNCACAACTCATTGCCATACACCGAGNGATATCATTAAATAGGNNCCNATTGACGAGCTTTTGGNTCGTTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCCACTCGTGNCGCGATTCTTGGC]
consensusID : consensus_9594#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 267 fasta sequence
[ACCAAACATACATTCTCCCGAGATAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACCGGACGCGTGGGCGGACGCGTGGGCGG]
[-] EMBL BM617616 [ACCAAACATACATTCTCCCGAGATAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACCGGACGCGTGGGCGGACGCGTGGGCGG]
[+] EMBL CNS09N41 [ AGATAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCCCGTCGGGGGTCACGTTATCCTTAAGAGTTTCGTCATCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9594#1 ------------------------------------------------------------
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 TAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTC 60
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 ------------------------------------------------------------
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 TATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTA 120
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 ------------------------------------------------------------
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 AGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGT 180
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 ------------------------------------------------------------
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 TTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGATTGTCA 240
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 ------------------------------------------------------------
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 TAGCAATCCAGACATACTCGCAGGGTTTATTGCTCTGNCCTGGTAGAATAAATTTTTTCG 300
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 ------------------------------------------------------------
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 ACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCA 360
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 ----------------------ATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATA 38
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ------------------------------------------------------------
consensus_9594#0 TAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATA 420
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 CAGCAGCATGTGTTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCAC 98
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ----------------------GACGAACAAGGACCACAGACTACTGCTCCACAATTTCG 38
consensus_9594#0 CAGCAGCATGTGTTT-CAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCAC 479
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 TTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAAC 158
consensus_9594#3 ------------------------------------------------------------
consensus_9594#2 ACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGT 98
consensus_9594#0 TTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAAC 539
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 GACTT-AGTCGCTGT-ACGTAT-CAGC--CATCCA-TTC---CGGTAC-TGACCATTATC 208
consensus_9594#3 --------TCCCTGTTACGTAT-CAGC--CATCCNATTC---CGGTACCTGACCATTATC 46
consensus_9594#2 AGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTCAACTGGTTTCTTGCCGCTCTT 158
consensus_9594#0 GACTT-AGTCGCTGT-ACGTAT-CAGC--CATCCATTCC----GGTAC-TGACCATTATC 589
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 TTCCAGTGCTTGCAG--TTGGACTTCTTCGA-GCGGTA--TTAAGTGTTGTTTGTT---- 259
consensus_9594#3 TTCCAGTGCTTGCACGCTTGGACTTCTTCGACGCGGTACTTNANCTNTNNGCTNNTCGCT 106
consensus_9594#2 GCGCAATAAATCTTC-TATGCACTTGTT-GATGTGTGCCATCCATTCCTGCTTCTCTGTT 216
consensus_9594#0 TTCCAGTGCTTGCAG--TTGGACTTCTTCGA-GCGGTA--TTAAGTGTTGTTTGTT---- 640
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 -GTACTTCTTCTTGC-CAATA-ACAA--TA-TTGCCATACACCAAAA--TATCATT---A 308
consensus_9594#3 TGTACTTCTTCTTGC-CAATNCACAACTCA-TTGCCATACACCGAGNGATATCATT---A 161
consensus_9594#2 TGTGTCGCAGCATACACAGCAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGG 276
consensus_9594#0 -GTACTTCTTCTTGC-CAATA-ACAA--TA-TTGCCATACACCAAAA--TATCATT---A 689
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 AATAGGAAA-AATTGACGAGCTTTTG-GTCG--TTTACGACACATCTTTGTAAGAACACC 364
consensus_9594#3 AATAGGNNCCNATTGACGAGCTTTTG-GNTCGTTTTACGACACATCTTTGTAAGAACACC 220
consensus_9594#2 TACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGT 336
consensus_9594#0 AATAGGAAA-AATTGACGAGCTTTTG--GTCG-TTTACGACACATCTTTGTAAGAACACC 745
consensus_9594#4 ------------------------------------------------------------
consensus_9594#1 TTCACCTAC--CAGGACCCGCCCGGGAAGAAACAA-TGGTTGGCCAGATGTTCCGAAACA 421
consensus_9594#3 TTCACCTAC--CAGGACCCGCCCGGGAAGAAACAAATGGTTGGCCAGATGTTCCGAAACA 278
consensus_9594#2 TTGTTGTACTTCAGGACCCGCCCGGGAAGAAACAA-TGGTTGGCCAGATGTTCCGAAACA 395
consensus_9594#0 TTCACCTAC--CAGGACCCGCCCGGGAAGAAACAA-TGGTTGGCCAGATGTTCCGAAACA 802
consensus_9594#4 ----------------------------------ACCAAACATACAT-TCTCCCGAGATA 25
* ** * * **** * *
consensus_9594#1 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGC-TTCGCTGTTAACTAATTTGTCAACC 479
consensus_9594#3 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGCCTTCGCTGTTAACTAATTTGTCAACC 337
consensus_9594#2 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGC-TTCGCTGTTAACTAATTTGTCAACC 453
consensus_9594#0 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGC-TTCGCTGTTAACTAATTTGTCAACC 860
consensus_9594#4 ATTACTTTATTATAACAACT--GCTGGTATTATCTATGAACATTAAAGCACTCA-CAGTT 82
** * * ** * * ** * *** * * **** * * **
consensus_9594#1 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 539
consensus_9594#3 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 397
consensus_9594#2 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 513
consensus_9594#0 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 920
consensus_9594#4 CTATTTTT-CAAGTTTACCATCAGCGTA---AAATTTGGGCTCGTCGTGGGTCACG-TTA 137
***** ** ** *** *** *** * ** * * **
consensus_9594#1 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 598
consensus_9594#3 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 456
consensus_9594#2 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 572
consensus_9594#0 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 979
consensus_9594#4 TCCTTAAGAGTT-TCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCA----GTAG 192
* ** * * ** ** * *** ** ** ** * * * ** *
consensus_9594#1 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGG 658
consensus_9594#3 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTT--GATAATTGA 514
consensus_9594#2 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGG 632
consensus_9594#0 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTT--GATAATTGA 1037
consensus_9594#4 AGT-TAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACCGGACGCGTGG 251
*** * * * * * ** ** * * * ** ** ** **
consensus_9594#1 GCGG--------------------------------- 662
consensus_9594#3 TCAGTCGCTGCCACTCGTGNCG---CGATTCTTGGC- 547
consensus_9594#2 GCGG--------------------------------- 636
consensus_9594#0 TCAGTCGCTGCTGTTGCTGACCGGCCGATTCTTGCCT 1074
consensus_9594#4 GCGGACGCGTGGGCGG--------------------- 267
* *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||