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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9598#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1128 fasta sequence
[TGGGAAACTTCATGCGCAACCGGTAGATTTCTTGC-AAAACAGAAACAGAACAGGAATGCAAT-T-TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA-GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA-CTC-GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC-C-CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA-TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG-AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA-CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT-CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCTAATAATTAAA--AAAAAAAAAA]
[+] EMBL CNS08PCP [TGGGAAACTTCATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAATATATTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAGAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAGAAAACAGAGACTGATCGTGCC ]
[+] EMBL CNS08UJM [ CATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGAATGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTg ]
[+] EMBL CNS08WTU [ aaaaaaaATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTCTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACCTCGGGGCGTGTTTCGGCGCGAGGCCAGCGTGTATTAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCA ]
[+] EMBL CNS08GXO [ ATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGGACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATTTTTTACCGGAAGG ]
[+] EMBL CNS08CYM [ CAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTACGCGCGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCA ]
[+] EMBL CNS08LF6 [ CGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTCCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAAAATCCCGAG ]
[+] EMBL BM627204 [ ccgCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACT ]
[+] EMBL CNS08KVN [ ggaTTGCAAAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACATATTCTCAAACAAACGGCACGCTCTCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAATCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTCCATCGGTTCTGCAACGTGCACAGCTTCAGCAAGCCGAACGATCTGGACGCCCTGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTTAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTCCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATTTTTTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAA ]
[-] EMBL CNS08CYN [ AGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGAA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCAAAAAATAAAA AAAAAAAAA ]
[-] EMBL CNS08WTV [ AACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTCTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAAAAACGAACCGATCATCTACCGGAAGGGTCCCC TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCTATTAATTA ]
[+] EMBL CNS0956D [ TGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCACGGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTTAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGGTGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTCCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCATTTTTCCTGC ]
[-] EMBL CNS08KVO [ ATTGCCATCGGCTACGGCCAAAGCGACGAGAA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCAAAAAAAGCTGGTTAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGAAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CCACGGACGAGAACCTCCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAAAGAACTCACAGCAAATAAAGTCTCGATTGAGCTAATCGTTAAACGAAAAAAAAAA]
[-] EMBL CNS08PCQ [ CCTCCTTTGATGCCCGGGCCGTCCTCTAC C CCACGGACGAGAACCTGCGCGACTATCTCGGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGTTCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATATCTGGATAt ]
[-] EMBL CNS08LF7 [ CAATTTTTACAACACAACGTTTTTGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCTACGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATAACTCTTGATTTA ]
[-] EMBL CNS08UJN [ CCGTTCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAAAAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCTAATCGTTA ]
consensusID : consensus_9598#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 822 fasta sequence
[GCAGGTTAACTGTTCCTGCCAGCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCGTCAAACAAACTGGGACGCTCCCTAAACTCCAGGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGTGCAGGCAAAAGCTTACTCCCGAACAGCTGGATCGTGGTNGCGCATCGATTGGGCCAAAGGGCTTTCATCCGGTTCTTGCCAAGCGGTGCACAGCTTCNAGCAAAACCTGAACNGAGTCTGGATTTGCCCTGGAGCTTGCATTGAACCCTTGGCCGGCCATTTGACTGGGTGCTTGCAAGGAGGTTTAACGCATGGATNTGCCCATCGNGCTAACTGGGGCCAAAATGCCGGACGAAGTACTTACGGTTACCGTTGGTTACANCCGGNNTCGCCACGAANGNGACTGTAAGCNGTTGTAACNCAAAGACNTGCTCAGCCCCNGGGACCAACGCCTAGGGNTACNAGACTAAACGTAGGGACCCAAGGAGCCTTAGTGATNCAACCATACAGAGGGTCGTAAACCCATTTGTNTTCACCACAAGCNTTTGGNGAACAAAAGGACTGGCCGACATTCCTTGTTCACGAAAAGCTGAGTGTGCCCGGCAATTCGGGAACATATATGGGCCGGAAAATGGCCGGCCCNANATTTCCCCGGNGCCGATATNACCCCNATATNATNGNNACGGGCAACCACNNTGGGTGACCCGGATGNCACATATCTTAAAAACCCCCGTGAAAAGGTGGCACACCGCAAGAN]
[+] EMBL AL696154 [GCAGGTTAACTGTTCCTGCCAGCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCGTCAAACAAACTGGGACGCTCCCTAAACTCCAGGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGTGCAGGCAAAAGCTTACTCCCGAACAGCTGGATCGTGGTNGCGCATCGATTGGGCCAAAGGGCTTTCATCCGGTTCTTGCCAAGCGGTGCACAGCTTCNAGCAAAACCTGAACNGAGTCTGGATTTGCCCTGGAGCTTGCATTGAACCCTTGGCCGGCCATTTGACTGGGTGCTTGCAAGGAGGTTTAACGCATGGATNTGCCCATCGNGCTAACTGGGGCCAAAATGCCGGACGAAGTACTTACGGTTACCGTTGGTTACANCCGGNNTCGCCACGAANGNGACTGTAAGCNGTTGTAACNCAAAGACNTGCTCAGCCCCNGGGACCAACGCCTAGGGNTACNAGACTAAACGTAGGGACCCAAGGAGCCTTAGTGATNCAACCATACAGAGGGTCGTAAACCCATTTGTNTTCACCACAAGCNTTTGGNGAACAAAAGGACTGGCCGACATTCCTTGTTCACGAAAAGCTGAGTGTGCCCGGCAATTCGGGAACATATATGGGCCGGAAAATGGCCGGCCCNANATTTCCCCGGNGCCGATATNACCCCNATATNATNGNNACGGGCAACCACNNTGGGTGACCCGGATGNCACATATCTTAAAAACCCCCGTGAAAAGGTGGCACACCGCAAGAN]
consensusID : consensus_9598#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[TCAGGCAGAATCCCCCGAGGTTATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCTCAAACAAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCGGCATGACGGTGCTGCAGNGAGTTTAACCGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTACGCNGTTTCGGCGCGAGGCGAGCGTGTACCAGAGGCCGCCGNGACAAGCCTGGTCAGCTACGTGGCCAGCCTGTACACCTCGGNCGTACATGTCCACTGGAAGCGCATCTTCGACANGCCGATCGATTGCCGACTGACGCTATCCGCGCTTNCCTTTATGAACAGACACCCGNGGGCCGNANCTACTTAGCNCGACAGGAACGGAAGAACCCTCGCGACGAACTAATACTACAANAAAGGAAAGAGAAAAGAGGGACNTAGCCACACGTGAGAACAAAGACCTGTACGNAAGCACAACAATACCAG]
[+] EMBL AL696400 [TCAGGCAGAATCCCCCGAGGTTATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCTCAAACAAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCGGCATGACGGTGCTGCAGNGAGTTTAACCGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTACGCNGTTTCGGCGCGAGGCGAGCGTGTACCAGAGGCCGCCGNGACAAGCCTGGTCAGCTACGTGGCCAGCCTGTACACCTCGGNCGTACATGTCCACTGGAAGCGCATCTTCGACANGCCGATCGATTGCCGACTGACGCTATCCGCGCTTNCCTTTATGAACAGACACCCGNGGGCCGNANCTACTTAGCNCGACAGGAACGGAAGAACCCTCGCGACGAACTAATACTACAANAAAGGAAAGAGAAAAGAGGGACNTAGCCACACGTGAGAACAAAGACCTGTACGNAAGCACAACAATACCAG]
consensusID : consensus_9598#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 647 fasta sequence
[GAATCCCCCGNGGTTTTTCAAGCATTCTAAAACATATTCTCAACAAACGGTACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCAGGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTTCGTGTTTCGGCGCGAGGCGAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGAAGTCCGATCGATTGCGATGCGCTATCCGCTTCCTTTGACAGCCCGGGCGTCCTCTAACCGACGGACGAGAACCTGCGCGACTATCTCAGNTGGCGGCAGGCGGACGTGCACGTGAACAACCTGTACAACACAACATTCTTGGGAAACTTTGGTCGCTTCCGGGTTGAGCAATTCGCACCGCGGAGAAGCGGCTGCCAAGGGACGTTGGCGGAGCGATCACCGAA]
[+] EMBL AL694931 [GAATCCCCCGNGGTTTTTCAAGCATTCTAAAACATATTCTCAACAAACGGTACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCAGGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTTCGTGTTTCGGCGCGAGGCGAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGAAGTCCGATCGATTGCGATGCGCTATCCGCTTCCTTTGACAGCCCGGGCGTCCTCTAACCGACGGACGAGAACCTGCGCGACTATCTCAGNTGGCGGCAGGCGGACGTGCACGTGAACAACCTGTACAACACAACATTCTTGGGAAACTTTGGTCGCTTCCGGGTTGAGCAATTCGCACCGCGGAGAAGCGGCTGCCAAGGGACGTTGGCGGAGCGATCACCGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9598#0 ------------TGGGAAACTTCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAG 48
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ----------------TCAGGCAGAATCCCCCGAGGTTATTTCTTGCAAAACAGAAACAG 44
consensus_9598#1 GCAGGTTAACTGTTCCTGCCAGCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAG 60
consensus_9598#0 AACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACACTTTC-TCAAACGAAC-GGCA 106
consensus_9598#3 -----GAATCCCCCGNGGTTTTTCAAGCATTCTAAAACATATTC-TCAA-CAAAC-GGTA 52
consensus_9598#2 AACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTC-TCAAACAAAC-GGCA 102
consensus_9598#1 AACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCGTCAAACAAACTGGGA 120
**** * *** **************** *** **** * *** ** *
consensus_9598#0 CGCTCCCTACACTCCAG-CACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 165
consensus_9598#3 CGCTCCCTACACTCCAG-CACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 111
consensus_9598#2 CGCTCCCTACACTCCAG-CACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 161
consensus_9598#1 CGCTCCCTAAACTCCAGGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 180
********* ******* ******************************************
consensus_9598#0 GCAG---GAGGAAAAGCT-ACTCCCGAACAGCTGGATCGTGGTG-CGCATCGAT--GGC- 217
consensus_9598#3 GCAG---GAGGAAAAGCT-ACTCCCGAACAGCTGGATCGTGGTG-CGCATCGAT--GGC- 163
consensus_9598#2 GCAG---GAGGAAAAGCT-ACTCCCGAACAGCTGGATCGTGGTG-CGCATCGAT--GGC- 213
consensus_9598#1 GCAGTGCAGGCAAAAGCTTACTCCCGAACAGCTGGATCGTGGTNGCGCATCGATTGGGCC 240
**** * ******* ************************ ********* ***
consensus_9598#0 -AAAGGCTTTCATC-GGTTCT-GCAACG---TGCACAGCTTCA-GCAAA--CCGAACGA- 267
consensus_9598#3 -AAAGGCTTTCATC-GGTTCT-GCAACG---TGCACAGCTTCA-GCAAA--CCGAACGA- 213
consensus_9598#2 -AAAGGCTTTCATC-GGTTCT-GCAACG---TGCACAGCTTCA-GCAAA--CCGAACGA- 263
consensus_9598#1 AAAGGGCTTTCATCCGGTTCTTGCCAAGCGGTGCACAGCTTCNAGCAAAACCTGAACNGA 300
** ********** ****** ** * * *********** ***** * ****
consensus_9598#0 -TCTGGAT--GCCCTGCAGCTGA---TGAACC--TTGCCGGCA---TGAC--GGTGCT-G 313
consensus_9598#3 -TCTGGAT--GCCCTGCAGCTGA---TGAACC--TGGCCGGCA---TGAC--GGTGCT-G 259
consensus_9598#2 -TCTGGAT--GCCCTGCAGCTGA---TGAACC--TGGC-GGCA---TGAC--GGTGCT-G 308
consensus_9598#1 GTCTGGATTTGCCCTGGAGCTTGCATTGAACCCTTGGCCGGCCATTTGACTGGGTGCTTG 360
******* ****** **** ****** * ** *** **** ****** *
consensus_9598#0 CAGG--AGTTTAAC-----GAGATTGCCATCGG-----CTACGGCCAAAGCGACG----- 356
consensus_9598#3 CAGG--AGTTTAAC-----GAGATTGCCATCGG-----CTACGGCCAAAGCGACG----- 302
consensus_9598#2 CAGNG-AGTTTAACC----GAGATTGCCATCGG-----CTACGGCCAAAGCGACG----- 353
consensus_9598#1 CAAGGAGGTTTAACGCATGGATNTGCCCATCGNGCTAACTGGGGCCAAAATGCCGGACGA 420
** ******* ** * ****** ** ******* * **
consensus_9598#0 AGTACTCGTTCG-TGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGC-GCCGGGACAAGC- 413
consensus_9598#3 AGTACTCGTTCG-TGTTTCGGCGCGAGGCGAGCGTGTACCAGCGGC-GCCGGGACAAGC- 359
consensus_9598#2 AGTACTCGTACGCNGTTTCGGCGCGAGGCGAGCGTGTACCAGAGGCCGCCGNGACAAGCC 413
consensus_9598#1 AGTACTTACGGTTACCGTTGGTTACANCCGGNNTCGCCACGAANGNGACTGTAAGCNGTT 480
****** * ** * * * * * * * * *
consensus_9598#0 --TGGTCAGCTACGTGGCCAGCCTGTTCACCT--CGGC-GTACATGTTCCACTGGAAGCG 468
consensus_9598#3 --TGGTCAGCTACGTGGCCAGCCTGTTCACCT--CGGC-GTACATGTTCCACTGGAAGCG 414
consensus_9598#2 --TGGTCAGCTACGTGGCCAGCCTGTACACCT--CGGNCGTACATGT-CCACTGGAAGCG 468
consensus_9598#1 GTAACNCAAAGACNTGCTCAGCCCCNGGGACCAACGCCTAGGGNTACNAGACTAAACGTA 540
** ** ** ***** * ** * *** * *
consensus_9598#0 CATCTTCGA-CGGCCGATCGATTGC-GAT--GC-GCTATCCAC-CCTCCTTTGATGCCCG 522
consensus_9598#3 CATCTTCGA-AGTCCGATCGATTGC-GAT--GC-GCTATCCGC-T-TCCTTTGACAGCCC 467
consensus_9598#2 CATCTTCGACANGCCGATCGATTGCCGACTGAC-GCTATCCGCGCTTNCCTTTATGAACA 527
consensus_9598#1 GGGACCCAAGGAGCCTTAGTGATNCAACCATACAGAGGGTCGTAAACCCATTTGTNTTCA 600
* * ** * * * * * * ** *
consensus_9598#0 GGCCGTCCTCTACCCGACGGACGAGA-ACCTGCGCGACTATCTCAGCTGGCGGCAGGC-G 580
consensus_9598#3 GGGCGTCCTCTAACCGACGGACGAGA-ACCTGCGCGACTATCTCAGNTGGCGGCAGGC-G 525
consensus_9598#2 GA--------CACCCGNGGGCCGN---ANCTAC----TTAGCNCGACAGG-AACGGAA-G 570
consensus_9598#1 CCACA---AGCNTTTGGNGAACAAAAGGACTGGCCGACATTCCTTGTTCACGAAAAGCTG 657
* * * ** * *
consensus_9598#0 GACGTGCACG-T-------GAACA-ATCTGTACAACACAACGTTCT--GGAA--TTTGGT 627
consensus_9598#3 GACGTGCACG-T-------GAACA-ACCTGTACAACACAACATTCTTGGGAAACTTTGGT 576
consensus_9598#2 AACCCTCGCGAC-------GAACT-AATACTACAANAAAGGAAAGAGAAAAGAGGGACNT 622
consensus_9598#1 AGTGTGCCCGGCAATTCGGGAACATATATGGGCCGGAAAATGGCCGGCCCNANATTTCCC 717
* ** **** * * * *
consensus_9598#0 CGCTTCCGGGTTGAGCAATTC-CGACGCGGAGAAGCGGCTGC-AAGGGACGTTGGCG-AG 684
consensus_9598#3 CGCTTCCGGGTTGAGCAATTCGCACCGCGGAGAAGCGGCTGCCAAGGGACGTTGGCGGAG 636
consensus_9598#2 AGCCACACGTGAGAACAAAGACCTGTACGNAAGCACAACAATACCAG------------- 669
consensus_9598#1 CGGNGCCGATATNACCCCNATATNATNGNNACGGGCAACCACNNTGGGTGACCCGGATGN 777
* * * * * * * *
consensus_9598#0 CGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCAT 744
consensus_9598#3 CGATCAC--CGAA----------------------------------------------- 647
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 CACATATCTTAAAAACCCCCGTGAAAAGGTGGCACACCGCAAGAN--------------- 822
consensus_9598#0 CTACCGGAAGGGTACCATTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAGAAACA 804
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 ------------------------------------------------------------
consensus_9598#0 GAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCC 864
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 ------------------------------------------------------------
consensus_9598#0 CGAGATACTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGC 924
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 ------------------------------------------------------------
consensus_9598#0 GCAACCCATCGTTCGGTATCAGCTCGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAA 984
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 ------------------------------------------------------------
consensus_9598#0 GGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGAT 1044
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 ------------------------------------------------------------
consensus_9598#0 TTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTG 1104
consensus_9598#3 ------------------------------------------------------------
consensus_9598#2 ------------------------------------------------------------
consensus_9598#1 ------------------------------------------------------------
consensus_9598#0 AGCTAATAATTAAAAAAAAAAAAA 1128
consensus_9598#3 ------------------------
consensus_9598#2 ------------------------
consensus_9598#1 ------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||