These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9619#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2363 fasta sequence [ACGTTTTCCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTACTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAACCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGG-ATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGT-T-TGTATGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATCTCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTA-CCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGCCGGGCTATGTTTTGCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAGAATGTGTCGTCACGG-ATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTATGCGAGGCTGATGTTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGGTTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACGTTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGTCGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGTTAATAAACGGCCCAGTGGTGTATCTCAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGCAAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACA-CCGTTT-GCTT-CCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGT-GTCAACTTTGCGTGG-CTGCAGA-TGGAAGGAATCGCT-CGCAATCAC-TTCCATCATGTGATCTTCAATCTGGAG-C-TGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTATACACCTCCAACGGCGTT-TGGGTAGTTTCA-TTCTTCT-TCGGATCGTGGTACGTCCCCTTTCCGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCG-GAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTCTTAGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGAGTCGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCCGGATGGTAGCAGTCCGTATGGTTGCGCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGCTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTTGCACTCGCGTAAACACTGCTCGCCCGGAAATGTGGTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGGCGCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACCTTTTTTTTGTTTGCGCGTAAACTTGTCATCGCGCACTAGAC] [-] EMBL BM656399 [ACGTTTTCCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTACTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAACCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGG ATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGT T TGTATGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCcgg ] [+] EMBL CNS08FC0 [ aaAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACAATGAACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTGCTGTCGCTTCGAAATCCCAATCCCCTTCAAATCCCAGCCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGG ATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGT G AATGTGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATCTCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTA CCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGACGGGCTATCTTTTGCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGGATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCCTATGCGTGCAGGTACAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAGAATGTGTCGTCACGGAATTAAAAAAAAATGGGTGAGCAGTGAGAATGGTGGGTTTGCGAGGCTGATGTTGTTGATCGCTCCT ] [-] EMBL BM611787 [ AGATCAATGCGAGCTGAGAAGCGACCGATAAGCGGAATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGTGTATGTATGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCTTTAACCATCTCCGACGTTTCGCCGACCTGCAGCACCAGAGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCAGGATTGTTCGCACGGAAGCGGACACGTGCGTAGCCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGCCGGGCTATGTTTTGCGCAATTTCGAGCGTAATCGGTACCCGACGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAATTCTACGATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTTCTCATCGCAGAATGTGTCGTCGCGG ATTTTCTCCGGCTGGGcgg ] [-] EMBL BX624656 [ TTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATCTCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTAGCCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGCCGGGCTATGTTTTGCGCAATTTCGAGCGTAATCGGTACCCTTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTCAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAGTTCCACAATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAAAATGTGTCGTCACGG ATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTAGGCCAGGCTGATATTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGGTTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACGTT ] [-] EMBL BM596156 [ GGAAGCGCCACGGTGTTGCGCGACAGTAACCGTTGCCGGGCTATGTTTTTCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGCCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAGAATGTGTCGTCACGG ATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTATGCGAGGCTGATGTTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGATTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAAGGTTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGTCGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTCGG ] [-] EMBL BM608667 [ CTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGGTTAGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACGTTAGATGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGTCGGTGATACAATAGTCACCAAACTCCGGTCGTCCACAGGTGGCATTCGGATGGTTCGCCGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGTTAATAAACGGCCCAGTGGTGTATCTCAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGCAAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACA CCGTTT GCAT CCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGT GTCAACTTTGCGTGG CTGCAGA TGGAAGGAATCGCT CGCAATCAC CTCCATCATGTGATCTTCAATCTGCAG C TGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAACCGTGCCCCACGCCGTACCGTATACACCTCCAACGGTGTT TGGGTAGTTTCA TTCTTCT TCGGATCGTGGTACGTCCCCTTTCCGTTGATCAGCAcgg ] [-] EMBL BX628825 [ ATATAGTGCTCATATCGATTCGACTCAANCATGCTCTCGAAGCTANCAGGATAGTTGTAGAAACCAAAGGTTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTATCGTACGCCTGAAAGTCGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGTTAATAAACGGCCCTGTAGTGTATCTTAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGCAAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACA CCGTTT GCTT CCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGT GTCAACTTTGCGTGG CTGCAGA TGGAAGGAATCGCT CGCAATCAC TTCCATCATGTGATCTTCAATCTGGAG C TGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTATACACTTCCAACGGCGTT TGGGTAGTTTCA TTCTTCT TCGGATCGTGATACGTCCCCTTTCCGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCG GAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCC ] [-] EMBL BX619434 [ anATAAGTGTCTTTAACACCCGTTTAGCTTNCCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGTNGTCAACTTTGCGTGGACTGCAGATTGGAAGGAATCGCTACGCAATCACATTCCATCATGTGATCTTCAATCTGGAGNCNNGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTATACACTTCCAACGGCGTTATGGGTAGTTTCATTTCTTCTNTCGGATCGTGATACGTCCCCTTTCCGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGNNAAGGCAACCCGGGCATAAAC ] [-] EMBL CNS08FBZ [ CACCTCCAACGGCGTT TGGGTAGTTTCA TTCTTCT TCGGATCGTGGTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCG GAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTCTTAGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGAGTCGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCCGGATGGTAGCAGTCCGTATGGTTGCGCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGCTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTTGCACTCGCGTAAACACTGCTCGCCCGGAAATGTGGTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGGCGCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACCTTTTTTTTGTTTGCGCGTAAACTTGTCATCGCGCACTAGAC] consensusID : consensus_9619#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 924 fasta sequence [GTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC-TTGGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTCCAGTCAACCGGGACCGG] [-] EMBL BX606566 [GTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC TTGGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTTCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCTGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCTCGTTCGACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTTAAACTCG ] [-] EMBL BM595127 [ GCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC TTGGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGTTGGGTATTGTCGCACTCGCGCAAACACTGCcgg ] [-] EMBL BM601643 [ CCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC TTAGGCTCTCGCACTATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGTTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCGCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGg ] [-] EMBL BM606818 [ GTTCGGATCCACTCTCTTTAGGCTCCCGTACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAATGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCAAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCcgg ] [-] EMBL BM579741 [ GTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGTAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGGACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCcgg ] [-] EMBL BM614852 [ GCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGTAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGGACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTCCAGTCAACCGG ] [-] EMBL BM609206 [ ATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAATGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCAAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTTAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTTCAGTCAACCCGG ] [-] EMBL BM587333 [ AGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGTTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTAGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTTGCGTACGCGACCACTAGCACACCCAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAGCCCAGTTGTTGGGAAAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTCCAGTCAACCACTACCGG] consensusID : consensus_9619#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence [CCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTGCTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAGCCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGTTTGTATGTGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTTACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGCGG] [-] EMBL BM599500 [CCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTGCTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAGCCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGTTTGTATGTGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTTACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 GTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAA 60 consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 CCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGC 120 consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 CGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTCTTGGGCTCTCGCACGAT 180 consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 CAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGT 240 consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 GCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTG 300 consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 GGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTG 360 consensus_9619#0 ------------------------------------------------------------ consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 AATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCG 420 consensus_9619#0 ------------ACGTTTTCCTGGGAGTTCACAAG-CAG-----TGACTAGTTTTATTGA 42 consensus_9619#2 -------------------CCTGGGAGTTCACAAG-CAG-----TGACTAGTTTTATTGA 35 consensus_9619#1 GCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCAC 480 ** ** * ** * * *** **** * consensus_9619#0 GCTGTACAAC--TATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACA-T 99 consensus_9619#2 GCTGTACAAC--TATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACA-T 92 consensus_9619#1 ACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGT-CCGTATGGTTGCCTTTCGCACAGT 539 * ** * * *** * * ** **** * *** * * ** * *** * consensus_9619#0 TGCACTACATAAATAAC----CGAAGTACTCCTACGACGC--------GACGTCAGTACT 147 consensus_9619#2 TGCACTACATAAATAAC----CGAAGTACTCCTACGACGC--------GACGTCAGTGCT 140 consensus_9619#1 CCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCC 599 * * * * * ** *** * * * ** * ** * consensus_9619#0 GCCGCTTCGGAATCCCAATCCCCTTCAAATCCCA---ACCTGGAAATGGGAGTGAGAAGG 204 consensus_9619#2 GCCGCTTCGGAATCCCAATCCCCTTCAAATCCCA---GCCTGGAAATGGGAGTGAGAAGG 197 consensus_9619#1 GTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGA 659 * *** * * * * * * **** * ** ******* * * consensus_9619#0 GGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCG 264 consensus_9619#2 GGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCG 257 consensus_9619#1 GCGTCCCGTTCGATTGCT-CGAGTAACGTGTTAAGCCAGCTT--TGAGCGTTGGCACGCG 716 * * * **** * * *** * *** * ** * ** * * ** * *** consensus_9619#0 ACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGT---TGTAGCTAGAATA 321 consensus_9619#2 ACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGT---TGTAGCTAGAATA 314 consensus_9619#1 TCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCA 776 * ** *** * ** * ** * * **** *** * ** * consensus_9619#0 AATTACGTTTGTATGTGTGTGTTTGTTTGTGGGTGTGCTG-------AAATTCGACTG-- 372 consensus_9619#2 AATTACGTTTGTATGTGTGTG----------------CTG-------AAATTCGACTG-- 349 consensus_9619#1 TCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAAC 836 ** ********** * ** ***** * * consensus_9619#0 ------TTTGCGAGTGGTTTTGTTGT-TCAGCTCACAGACTTCCC----TGCAGCAGATG 421 consensus_9619#2 ------TTTGCGAGTGGTTTTGTTGT-TCAGCTTACAGACTTCCC----TGCAGCAGATG 398 consensus_9619#1 TTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACA 896 * * * * ******* * * ** * **** * *** *** consensus_9619#0 ACCCACTGCT--GGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATC 479 consensus_9619#2 ACCCACTGCT--GGTGTGCGG--------------------------------------- 417 consensus_9619#1 CTAAACTGCTCCAGTCAACCGGGACCGG-------------------------------- 924 ****** ** * consensus_9619#0 TCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAA 539 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTACCGC 599 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 GGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTA 659 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 ACCGCTGCCGGGCTATGTTTTGCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGC 719 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCA 779 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CCGAGGGCGTTAGATCGAGAATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCC 839 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 GATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGC 899 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 AGAATGTGTCGTCACGGATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTATGCGA 959 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 GGCTGATGTTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCT 1019 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CATATCGGTTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACG 1079 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGT 1139 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTG 1199 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGT 1259 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TAATAAACGGCCCAGTGGTGTATCTCAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGC 1319 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 AAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACACCGTTTGCTTCCAGCA 1379 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGTGTCAACTTTGCGTGGCTGCAGAT 1439 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 GGAAGGAATCGCTCGCAATCACTTCCATCATGTGATCTTCAATCTGGAGCTGCAGCGGAC 1499 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 ACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTAT 1559 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 ACACCTCCAACGGCGTTTGGGTAGTTTCATTCTTCTTCGGATCGTGGTACGTCCCCTTTC 1619 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAACCCGGGCATAAACA 1679 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGT 1739 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 GGTAGAGATCACCGTTCGGATCCACTCTCTTAGGCTCTCGCACGATCAACGCTCCATAAT 1799 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 GCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTG 1859 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGA 1919 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CGCCGTCCATGTAGGGAGTCGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCCGGATGGT 1979 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 AGCAGTCCGTATGGTTGCGCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAG 2039 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TGCTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTTGCACTCGCGTAAA 2099 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CACTGCTCGCCCGGAAATGTGGTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTG 2159 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TTAAGCCAGCTTTGAGCGTTGGCACGGCGCGCGTACGCGACCACTAGCACACCGAGCAGT 2219 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 ACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAG 2279 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 CCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACCTTTTTTTTGTTTGCGCG 2339 consensus_9619#2 ------------------------------------------------------------ consensus_9619#1 ------------------------------------------------------------ consensus_9619#0 TAAACTTGTCATCGCGCACTAGAC 2363 consensus_9619#2 ------------------------ consensus_9619#1 ------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||