These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9623#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 873 fasta sequence [CCGCCCACGCGTCCGTGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAATCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAATTAGCAAATTTAGAC] [+] EMBL BM621573 [CCGCCCACGCGTCCGTGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCA ] [-] EMBL BX611744 [ TAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAATCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAATT ] [+] EMBL BM635501 [ ccgATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAATCTTCGAATTTCGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAACTAGCAAATTTAGAC] consensusID : consensus_9623#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 712 fasta sequence [CGACCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT-GTGTTACGGTGT-CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT-CC-AAACGGC-GCTCTTTTTACGTTTTTCTC-TTCCAGTACGCG-TTTC-GGTGAATGTGTATACACTT-GTTCA-GGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATT] [+] EMBL BM635662 [ GACCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCGTTTTCGGGGGAATGTGTATACACTT GTTCA GGGCAGGGTAATT ] [+] EMBL BM650376 [ccgCCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT ] [+] EMBL BM631561 [ CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGGCAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCC AAACGGC GCTCTTTTTACGTTTTTCTC TT ] [+] EMBL BM575493 [ CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCAACAAT ] [+] EMBL BM627536 [ CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CCAAAACGGC GCTCTTTTTACGTT ] [+] EMBL BM652210 [ CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCA ] [+] EMBL BM650318 [ CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGGTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGCGGCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCAGGGGCAGGGTAATTATCCT ] [+] EMBL BM622512 [ ccggtggtCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTCTTTCCAGTACGCG TTTC GGTGAATGTGTATACACTTGGTTCA GGGCAGGGTAATTATCCTAATA ] [+] EMBL BM614919 [ TCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCA ] [+] EMBL BM586855 [ ccgAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATT] [+] EMBL BM585841 [ ccgAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGTCCCTGCCCA ] [+] EMBL BM634941 [ CCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGGCAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCTGATGTTCGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCG ] [+] EMBL BX611745 [ CATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGC ] consensusID : consensus_9623#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTGTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTCGTCGAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCCGAGCCGAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA] [+] EMBL BX469128 [CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTGTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTCGTCGAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCCGAGCCGAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA] consensusID : consensus_9623#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence [GCAGAATCCCGCACGAGGTGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGGTGCGTGTACGTAAGATGAGTAGTTTTCATATCATTTGTANTCNCTNCGTATCTTGTGTTNNCCGTAGATCCCAACAACTGTCAGAACTATCATGTATGTTGTAGCCGCGTAGTGAGTCCTCAACGGTGTATA] [+] EMBL BX468802 [GCAGAATCCCGCACGAGGTGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGGTGCGTGTACGTAAGATGAGTAGTTTTCATATCATTTGTANTCNCTNCGTATCTTGTGTTNNCCGTAGATCCCAACAACTGTCAGAACTATCATGTATGTTGTAGCCGCGTAGTGAGTCCTCAACGGTGTATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9623#2 -----CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTT 55 consensus_9623#3 ----GCAGAATCCCGCACGAGGTG------CAGTTCCACATTCTACTAA-CTTTCATTTT 49 consensus_9623#1 CGACCCACGCGTCCGCTCAAAATG------CAGTTCCACATTCTACTAA-CTTTCATTTT 53 consensus_9623#0 ------------------------------------------------------------ consensus_9623#2 TAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTC 115 consensus_9623#3 -AATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTC 108 consensus_9623#1 -AATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTC 112 consensus_9623#0 ----------------------------CCGCCCACGCGTCCGTGGCACTAGTACTGCTC 32 *** * * * ***************** consensus_9623#2 TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 175 consensus_9623#3 TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 168 consensus_9623#1 TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 172 consensus_9623#0 TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 92 ************************************************************ consensus_9623#2 CTTGCACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 235 consensus_9623#3 CTTGCACTTCGCGGAGGCCTTG-CTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 227 consensus_9623#1 CTTGCACTTCGCGGAGGCCTTG-CTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 231 consensus_9623#0 CTTGCACTTCGCGGAGGCCTTG-CTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 151 ********************** ************************************* consensus_9623#2 GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 295 consensus_9623#3 GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 287 consensus_9623#1 GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 291 consensus_9623#0 GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 211 ************************************************************ consensus_9623#2 GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 355 consensus_9623#3 GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 347 consensus_9623#1 GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 351 consensus_9623#0 GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 271 ************************************************************ consensus_9623#2 GTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAA 415 consensus_9623#3 --CCAGGTGCGTGTACGTAAGATGAGTAGTTTTCATAT-----CATTTGTANTCNCTNCG 400 consensus_9623#1 --CCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAA 409 consensus_9623#0 --CCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAA 329 **** * * * * * * ** * ** * * * ** ** consensus_9623#2 CGGTGTATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTC 475 consensus_9623#3 TATCTTGT----GTTNNCCG---TAGATCCCAACAACTGTCAGAACTA--TCATGTAT-- 449 consensus_9623#1 CGGTGTATACCTGTCCGCCGGGTTACGTCTTT---AATATCGTCACTACATCATGCATTC 466 consensus_9623#0 CGGTGTATACCTGTCCGCCGGGTTACGTCTTT---AATATCGTCACTACATCATGCATTC 386 * * ** *** ** * * * ** **** ***** ** consensus_9623#2 GTCGAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTAC 535 consensus_9623#3 GTTGTAGCCGC-GTAGTGAGTCCT-CAACGGTGTATA----------------------- 484 consensus_9623#1 GTCA-AATATCAGCAGCTAATTGTGTTACGGTGTCCTGCCCAGTAGCAGTTCCTAGCTAC 525 consensus_9623#0 GTCA-AATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTAC 445 ** * * * ** * * * ******* consensus_9623#2 GGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCC 595 consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 G-TTCTTTACGGCACGAGTAGAGTGTATTACGTCGTAT-GTGATGGCGTTAATCTACCCA 583 consensus_9623#0 G-TTCTTTACGGCACGAGTAGAGTGTATTACGTCGTAT-GTGATGGCGTTAATCTACCCA 503 consensus_9623#2 GAGCCGAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA---------- 645 consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 CCGAAGTA----TTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACG 639 consensus_9623#0 CCGAAGTA----TTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACG 559 consensus_9623#2 ------------------------------------------------------------ consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 CGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAAT 699 consensus_9623#0 CGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAAT 619 consensus_9623#2 ------------------------------------------------------------ consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 CCTAGCTCCTATT----------------------------------------------- 712 consensus_9623#0 CCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGAT 679 consensus_9623#2 ------------------------------------------------------------ consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 ------------------------------------------------------------ consensus_9623#0 TGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTAT 739 consensus_9623#2 ------------------------------------------------------------ consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 ------------------------------------------------------------ consensus_9623#0 TTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAA 799 consensus_9623#2 ------------------------------------------------------------ consensus_9623#3 ------------------------------------------------------------ consensus_9623#1 ------------------------------------------------------------ consensus_9623#0 TCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAAT 859 consensus_9623#2 -------------- consensus_9623#3 -------------- consensus_9623#1 -------------- consensus_9623#0 TAGCAAATTTAGAC 873 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||