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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1148 fasta sequence
[CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGAGCCGGCCATTACT-CCCCG----AAAAAAA-------GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACC-GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG-CAAAAGGGGTCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAAGGCGG]
[+] EMBL BM641536 [CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCACCGGACATCTTTCTGGTCGCCGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCACACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAAT ]
[+] EMBL BM631639 [ cCGGTGCTCGGCACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACATTGTCAGCTAATGCCAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCcg ]
[+] EMBL CNS096BR [ ACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGCAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCCG AAAAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTAC ]
[+] EMBL BM648809 [ ccGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTC ]
[+] EMBL BX611411 [ AAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCAC ]
[+] EMBL BX602101 [ TCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCACCGGACATCTTTCTGGTCGCCGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTG ]
[+] EMBL BX606472 [ TTCCGCAAGGTGACTCACTGTATCTTCTACATGTACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTG GTGAGGGTAAGCCGGCACCGGACATCTTTCTGGTCGCCGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCACACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGTGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCG AACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAACAGTGTTCTAAACACAGCACCACCGGTTGGga ]
[+] EMBL CNS09BJG [ TCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGCAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACT CCCCG AAAAAAA AAAAATGCT TACAACTACTACCACTA ]
[+] EMBL BX615973 [ GCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACAC ]
[+] EMBL AGA284670 [ GCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGC ]
[+] EMBL BX618453 [ ATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTA ]
[+] EMBL BM655468 [ cCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCAAC GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG CAAAAGGGGTC ]
[-] EMBL CNS0991F [ cgccGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATTTGCACCAAAACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGAACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATAACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACT CCCCGAA AAAAAAA AATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTA GTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACC GTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACACGTTTCGTTTGCGTAGGACGCACAAGCGTCCACCCCG AAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAAT ]
[-] EMBL CNS096BS [ TGGTGCGCCATCTGCACCAAAAAAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACT CCCCGAAAAAAAAAAA AATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTA GTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACC GTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCG AAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAAGACAAGGCGG]
[+] EMBL BX617004 [ GCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCAAC GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG CAAAAGGGGTCCACTGCCGGGTGGGAGGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGAGGTGTATCGCTAGAATGTGAAATCGCTTGAATGAGCGCCCGT ]
[+] EMBL BX616916 [ CGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTTCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCTTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCAAC GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG CAAAAGGGGTCCACTGCCGGGTGGGAGGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGAGGTGTATCGCTAGAATGTGAAATCGCTTGAATGAGCGCCCGT ]
[+] EMBL BM643353 [ ccGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCACACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGTGCCGGCCATTACT CCCCG AAAAAAA GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCG AACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAACAGTGTTCTAAACACAGCACCACC GTTGGAGCAAAATTTTGATGATGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCGAAAAAAGGGGTCCGCTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAc ]
consensusID : consensus_9643#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 268 fasta sequence
[TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATATCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAACAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCATGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTATCGAAAGTGAACAAAACTATAAAAAAAA]
[-] EMBL AGA283624 [TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATATCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAACAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCATGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTATCGAAAGTGAACAAAACTATAAAAAA ]
[+] EMBL AGA284914 [ GTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATATCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAACAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCATGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTATCGAAAGTGAACAAAACTATAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9643#0 CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTC 60
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 ACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAA 120
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 CGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCA 180
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 TGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGA 240
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 CACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTC 300
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 AGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCG 360
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 CGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGC 420
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 TGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTA 480
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 AGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCG 540
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 ACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCA 600
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 TGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGG 660
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 TCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGT 720
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 CGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGAGCCGGCCATTACTCCCCGAA 780
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 AAAAAGCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTA 840
consensus_9643#1 ------------------------------------------------------------
consensus_9643#0 GTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCA 900
consensus_9643#1 -----TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTT 55
* * * * ** * ** ******** * ** * * **
consensus_9643#0 CCGTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGC 960
consensus_9643#1 TTATATCATT--AATCCTTACCAACTAAACA-----GAACATTTTGGAGGGAGAAAACTA 108
* * *** * * ** * ** *** * * * ***
consensus_9643#0 ACAAGCGTCCAACCCGCAAAAGGGGTCCACTGCCGGGTGGGACGGACGTTAGTTTGT-AT 1019
consensus_9643#1 GCCAAAAATGAAC-----AAATTAATCCACTAG-GCGTAATCGGGAATTCGGACAACCAC 162
* * *** *** ****** * ** *** * * *
consensus_9643#0 TTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAA 1079
consensus_9643#1 ACAATTGCGCGTATTCCATGGCAATATTTTAAATTGT---ATCAGTTTCTCTATCCAATA 219
* ** * * * ** * * ** * ** *** * * * * * * *
consensus_9643#0 TGTGAAATCGCTTG-ATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAA 1138
consensus_9643#1 GCT---CTCGCTAGTAATAAATTATCG--AAAGTGAACAAAACTATAAAAAAAA------ 268
* ***** * * * * ** ** * ******** * ********
consensus_9643#0 TACAAGGCGG 1148
consensus_9643#1 ----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||