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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9647#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1211 fasta sequence
[CCGGCCAGTGAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG-TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA-G-CG-AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC-AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC-AAAC-G-ATGCTCCGCTTCATCGTCACTTCCGAACAT-C-CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA-AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC-CACTG-GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGATTTA]
[+] EMBL BM642119 [CCGGCCAGTGAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATG ]
[+] EMBL CNS09Q38 [ AGTGAAC GTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGAC ]
[+] EMBL CNS08OGC [ aAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGGCTGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGA ]
[+] EMBL CNS08DW6 [ ACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAACGCCGCAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTTTTTCATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAT AAGTATTTCTGT ]
[+] EMBL CNS08I8Z [ GTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGACACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGCACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCAT ]
[+] EMBL CNS09KMF [ TCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGC ]
[+] EMBL CNS08NWK [ CTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACAACGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAA ]
[+] EMBL CNS08NEY [ CTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGCTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGCTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCACTGC ]
[+] EMBL BM618347 [ ccGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAAGGTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGC ]
[+] EMBL BM578335 [ ccgAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACACAAAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAACAGCATTGGTTGCTGTG ]
[+] EMBL BX620241 [ TTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAN G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACATCC CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACT ]
[-] EMBL CNS08DW7 [ CGAGCCCGGGTTCGATAAGTGGATCGCTATATTGGAAGTGTACGAGTACTAAATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAAAACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC GAATG TCCGCTTCATCGTAACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC AACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGAAAAAATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTAACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGGTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGA ]
[-] EMBL CNS08NEZ [ CTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGAACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGCTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAACGG ATG TCCGCTTCATCGTAACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACA CGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCTGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCT ]
[-] EMBL CNS08NWL [ GAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAAAACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATG TCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGAAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGATTTA]
[-] EMBL CNS09KMG [ CTGATTCGTCAAAACGG ATG TCCGCTTCATCGTCACTTCCGAACATGCGCGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGCACACTGAGAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTAGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTGGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTAAACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCT ]
[-] EMBL CNS08OGD [ CGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGAAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTAAACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATTTATAATAAATAAAGGCTAGA ]
[-] EMBL CNS09Q39 [ CTG GGGTGTCGTGACA CGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAG ]
[-] EMBL CNS08I90 [ GGTTCCTGGAAGATAAGCCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTAAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGATTTA]
consensusID : consensus_9647#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence
[CAGAATCGCCCCGAGGGTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTATGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGACAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGTATCGTTCTGACCGTGATTGGTNTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCAAACGATGCTCCGCTTCATCGATCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGCTGAT]
[+] EMBL AL931966 [CAGAATCGCCCCGAGGGTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTATGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGACAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGTATCGTTCTGACCGTGATTGGTNTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCAAACGATGCTCCGCTTCATCGATCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGCTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9647#0 CCGGCCAGTGAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAA 60
consensus_9647#1 ----CAGAATCGCCCCGAGGGTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAA 56
* * * ***************************************
consensus_9647#0 ACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAA 120
consensus_9647#1 ACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAA 116
************************************************************
consensus_9647#0 TTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAAC 180
consensus_9647#1 TTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAAC 176
************************************************************
consensus_9647#0 AAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCG 240
consensus_9647#1 AAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCG 236
************************************************************
consensus_9647#0 AACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTT 300
consensus_9647#1 AACCAAATCGCTTGCATCAAGTACACGCTGTTT-GTTTCAATATAGTAGCATGGATCGTT 295
********************************* **************************
consensus_9647#0 GGAGCGGGACTGTT-TGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTG 359
consensus_9647#1 GGAGCGGGACTGTTATGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTG 355
************** *********************************************
consensus_9647#0 GATCGCTATATTGGA-AGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCG 418
consensus_9647#1 GATCGCTATATTGGACAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCG 415
*************** ********************************************
consensus_9647#0 GTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGT 478
consensus_9647#1 GTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGT 475
**** *********************************************** *******
consensus_9647#0 CTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGT-TCGTTCTGACCGTGATTGGT 537
consensus_9647#1 CTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGTATCGTTCTGACCGTGATTGGT 535
*************************************** ********************
consensus_9647#0 T-CGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCA 596
consensus_9647#1 NTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCA 595
**********************************************************
consensus_9647#0 AACGATGCTCCGCTTCATCG-TCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGC 655
consensus_9647#1 AACGATGCTCCGCTTCATCGATCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGC 655
******************** ***************************************
consensus_9647#0 TGATCCAAGAAAGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGC 715
consensus_9647#1 TGAT-------------------------------------------------------- 659
****
consensus_9647#0 GTCAACCCTTGCCACTGGAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGAT 775
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 GCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTA 835
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 TGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGC 895
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 TCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCG 955
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 CATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGC 1015
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 ATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAG 1075
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 ATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAG 1135
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 ATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAA 1195
consensus_9647#1 ------------------------------------------------------------
consensus_9647#0 ATAAAGGCTAGATTTA 1211
consensus_9647#1 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||