These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 915 fasta sequence [CCGCCCACGCGTCCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC-GGCCGAGTATGTGGACACACTGTACACTT-GGTCCGCATTCAATACGAACGATCTT-GGCGAAGGTTTGGC-GGATGGGCTGAAGGGACTGATCAAGTA-CGTGCCACTGGAGAAGATTCA-CCTGATTGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGGTGATGCC] [+] EMBL BM647100 [CCGCCCACGCGTCCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGT GATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGGGCAGAGTATGTGGACACACTGTACACTTGGGTCCGCATTCAATACGAACGATCTT GGCGAAAGTTTGGC GGATGGGCTGAA ] [+] EMBL BM586567 [ CCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAAC ] [+] EMBL BM587660 [ CCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGGCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT G ] [+] EMBL BM608637 [ ccgGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAA ATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGA ] [+] EMBL BM599122 [ ccgGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAGGT ] [+] EMBL BM617007 [ ccgGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTTGGGCGAAGG ] [+] EMBL BX627896 [ GATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACNGTCATTTTGGTGACCGGATG ] [+] EMBL BM644102 [ ccgCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACG ] [+] EMBL BX624447 [ TTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGNGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCNCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAAGTTTGGCGGGATGGGCTGAANGGACTGATCAAGTACCGTGCCNCTGGAGAAGATTCACCCTGATAGGCCAC ] [+] EMBL BM596564 [ ccgTCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAGGTTTGGC GGATGGGCTGAAGGGACTGATCAAGTA CGTGCCACTGGAGAAGATTCA CCTGATTGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGGTGATGCC] [+] EMBL BM583747 [ ccgATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAGGTTTGGC GGATGGGCTGAAGGGACTGATCAAGTA CGTGCCACTGGAGAAGATTCA CCTGATTGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGG ] consensusID : consensus_9648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 832 fasta sequence [TCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATCAAGTACGTGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCAATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCTGCCCCAAAACGGCCAAAGGGAACTTTTTCCTAAAGACGAACGATAAATCACCATTCGCAATGGCATCGTAGTGCCAACTAAC--T------GGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTATTTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTGAAAAGAAAAAAAAAAAAGGCCACATGTGCCCAGCCGCGGGCTA] [+] EMBL BX616812 [TCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATCAAGTACGTGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCAATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCTGCCCCAAAACGGCCAAAGGGAACTTTTTCCTAAAGACGAACGATAAATCACCATTCGCAATGGCATCGTAGTGCCAACTAAC T GGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTATTTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAAGTAATTGAAATAAATTGA ] [+] EMBL BX608849 [ CGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCAATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCTGCCCCAAAACGGCCAAAGGGAACTTTTTCCTAAAGACGAACGATAAATTACCATTCGCAATGGCATCGTAGTGCCAACTAAC T GGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTATTTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTG ] [+] EMBL CNS08JHU [ AAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTTCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACAGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGA CAATCCAATTCCACTTGGCTTTG CTGCCCCAAAACGGCCAAAGGAAACTTTTTCCTAAAGACGAACGATAAATCACCATTCGCAATGGCATCGTAGTGCCAACTAACGGTAGCAACGGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTGATTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTGAAAAGAAAAAAAAAAAAGGCCACATGTGCCCAGCCGCGGGCTA] consensusID : consensus_9648#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 771 fasta sequence [CCGATTTGTTTCGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCATAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGGTTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAAGGCATTGCTGAGAGTATACCGCAGATATTCTCTCCGGAGCAGCTGCTGGAATTTAGTAAGCAATCGATCATTGGTCTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGTCCGCATTCAATACGAACGATCTTGGCGAAGGTTTGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGCCACTGGAGAAGATTCATCTGATAGGTGCTGGGCGA] [+] EMBL BM596784 [CCGATTTGTTTCGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCATAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGGTTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAAGGCATTGCTGAGAGTATACCGCAGATATTCTCTCCGGAGCAGCTGCTGGAATTTAGTAAGCAATCGATCATTGGTCTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGG ] [+] EMBL BM638243 [ ccgGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGTCCGCATTCAATACGAACGATCTTGGCGAAGGTTTGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGCCACTGGAGAAGATTCATCTGATAGGTGCTGGGCGA] consensusID : consensus_9648#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 704 fasta sequence [GAGGCCAGAATCCGCGCACGAGTGTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAAGTCAATATAACGGACATGAACTTACATACTGATGACGGAAAGACAAACAACGTTTACCATACCGTTTGCTGGGAAATCGGACGATCTGTTGGAAAGAACGAACTTGTTCAAAGCGAGAGATCATACGGATACGGTCATTTTGGTGACCGGGATGGACGTCGAACGTGACGAGCCGAATCGGGCAATCGATACGATCTACGAACGCGTATAAGGCACGTGGCGGGGTACAACTTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGGTCCGCNATTCAATACGAAGCGATCTTGGCGGAAGGTNTGGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACAACATCGTTAGGCAGTGCTTG] [+] EMBL BX468771 [GAGGCCAGAATCCGCGCACGAGTGTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAAGTCAATATAACGGACATGAACTTACATACTGATGACGGAAAGACAAACAACGTTTACCATACCGTTTGCTGGGAAATCGGACGATCTGTTGGAAAGAACGAACTTGTTCAAAGCGAGAGATCATACGGATACGGTCATTTTGGTGACCGGGATGGACGTCGAACGTGACGAGCCGAATCGGGCAATCGATACGATCTACGAACGCGTATAAGGCACGTGGCGGGGTACAACTTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGGTCCGCNATTCAATACGAAGCGATCTTGGCGGAAGGTNTGGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACAACATCGTTAGGCAGTGCTTG] consensusID : consensus_9648#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence [CTTAGGCTTACATTCACGCTAATCAAACACATTTTACATTTCTGTACAACGTTTCAACAATCAACAAATTACATTCCACAACTTCCTAGACAGCCTCAAAACAAACAACATAACGCCTTTCACCAACTAAGCTCATATCGACCGTTGCTACCGTTAGTTGGCACTACGATGCCATTGCGAATGGTGATTTATCGTTCGTCTTTAGGAAAAAGTTTCCTTTGGCCGTTTTGGGGCAGGCAAAGCCAAGTGGAATTGGATTGCTCACGCACCCGCCAGTTTTAAGCGAGAAAAGGGAGTGGCACTTCACCGCCAACAGGCTCTTTTCCGTTTCGGGATACACTGTCTCGGCATACAGCTCCCAGGCACGCTTATGAGAACATGCCGGATCTAGACATCCCGGTTGAACGGAAACGACGCCGTTGGGATAAAAATCTGCATCTCCGATTGGATCACGCTTGCCCAGCACCTTCGCATTGGCCAGTAGGCCAACAGTGCTCGAGGAAT] [+] EMBL CNS08JHV [CTTAGGCTTACATTCACGCTAATCAAACACATTTTACATTTCTGTACAACGTTTCAACAATCAACAAATTACATTCCACAACTTCCTAGACAGCCTCAAAACAAACAACATAACGCCTTTCACCAACTAAGCTCATATCGACCGTTGCTACCGTTAGTTGGCACTACGATGCCATTGCGAATGGTGATTTATCGTTCGTCTTTAGGAAAAAGTTTCCTTTGGCCGTTTTGGGGCAGGCAAAGCCAAGTGGAATTGGATTGCTCACGCACCCGCCAGTTTTAAGCGAGAAAAGGGAGTGGCACTTCACCGCCAACAGGCTCTTTTCCGTTTCGGGATACACTGTCTCGGCATACAGCTCCCAGGCACGCTTATGAGAACATGCCGGATCTAGACATCCCGGTTGAACGGAAACGACGCCGTTGGGATAAAAATCTGCATCTCCGATTGGATCACGCTTGCCCAGCACCTTCGCATTGGCCAGTAGGCCAACAGTGCTCGAGGAAT] consensusID : consensus_9648#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 120 fasta sequence [CCGCGGACGCGTGGGGTTGTGGAATGTAATTTGTTGATTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTG] [+] EMBL BM654243 [CCGCGGACGCGTGGGGTTGTGGAATGTAATTTGTTGATTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9648#1 TCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCA 60 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 ------CCGCCCACGCGTCCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCG 54 consensus_9648#2 ---------CCGATTTGTTTCGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCG 51 consensus_9648#3 ------------------------------------------------------------ consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 ATATAACGGACATGAACTACATACTGATCAAGTACGTGCCACTGGAGAAGATTCACCTGA 120 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 GCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGC 114 consensus_9648#2 GCATAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGC 111 consensus_9648#3 ------------------------------------------------------------ consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 TAGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAA 180 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 AAGATGGGCAAGCGGATGATCGTGT---CGATCGTACTGATCGGATGCTTTTGCGCTCTG 171 consensus_9648#2 AAGATGGGCAAGCGGATGATCGTGT---CGATCGTACTGATCGGATGCTTTTGCGCTCTG 168 consensus_9648#3 --------GAGGCCAGAATCCGCGCA--CGAGTGT---GATCGGATGCTTTTGCGCTCTG 47 consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 CGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGG 240 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 GAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTG 231 consensus_9648#2 GAAGTGCACCCCTTTGACTTCGGTGGGTTGGTGAAAAAGACGGGAGACGTCGCAAAGGTG 228 consensus_9648#3 GAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTG 107 consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 GCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCA 300 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 GCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAG 291 consensus_9648#2 GCAGCCAAAACGGCGAAAGGCATTGCTGAGAGTATACCGCAGATATTCTCTCCGGAGCAG 288 consensus_9648#3 GCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAG 167 consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 ATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCG 360 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 CTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACG 351 consensus_9648#2 CTGCTGGAATTTAGTAAGCAATCGATCATTGGTCTACCGGCGGAAGCGATCGCTGCAACG 348 consensus_9648#3 CTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACG 227 consensus_9648#4 ---CTTAGGCTTACATTCACGCTAATCAAACACATTTTACATTTCTGTA---CAACGTTT 54 consensus_9648#1 TCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGC 420 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 ATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAA-GT 410 consensus_9648#2 ATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAA-GT 407 consensus_9648#3 ATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAAGT 287 consensus_9648#4 CAACAATCAACAAATTACATTCCACAACTTCCTAGACAGCCTCAAAACAAACAACATAAC 114 consensus_9648#1 TGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACT 480 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 CA-ATATAACGGACATGAACT-ACATACTGATGACGGAA-GACAA-CAACGTT-ACCATA 465 consensus_9648#2 CA-ACATAACGGACATGAACT-ACATACTGATGACGGAA-GACAA-CAACGTT-ACCATA 462 consensus_9648#3 CA-ATATAACGGACATGAACTTACATACTGATGACGGAAAGACAAACAACGTTTACCATA 346 consensus_9648#4 GCCTTTCACCAACTAAGCTCATATCGACCGTTGCTACC--GTTAGTTGGCACT-ACGATG 171 consensus_9648#1 CCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCT 540 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 CCGTT-GCTGG-----AATCCGACGATCTGT--GGAAGAACGAACT-GTTCAAC-----A 511 consensus_9648#2 CCGTT-GCTGG-----AATCGGACGATCTGT--GGAAGAACGAACT-GTTCAAC-----A 508 consensus_9648#3 CCGTTTGCTGGG---AAATCGGACGATCTGTTGGAAAGAACGAACTTGTTCAAAGCGAGA 403 consensus_9648#4 CCATT-GCGAATGGTGATTTATCGTTCGTCTTTAGGAAAAAGTTTCCTTTGGCCGTTTTG 230 consensus_9648#1 GCCCCAAAACGGCCAAAGGGAACTT--TTTCCTAAAGACGAACGATAAATCACCATTCGC 598 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 AATCATACG-ATACGGTCATTTTGG--TGACCGG-ATGGACGTCGAACGTGAACGAGCCG 567 consensus_9648#2 AATCATACG-ATACGGTCATTTTGG--TGACCGG-ATGGACGTCGAACGTGAACGAGCCG 564 consensus_9648#3 GATCATACGGATACGGTCATTTTGG--TGACCGGGATGGACGTCGAACGTGA-CGAGCCG 460 consensus_9648#4 GGGCAGGCAAAGCCAAGTGGAATTGGATTGCTCACGCACCCGCCAGTTTTAAGCGAGAAA 290 consensus_9648#1 AATGGCATCGTAGTGCCAACTAACTGGTCGATATGAGCTTAGTTGGTGA-AAGGCGTTAT 657 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 AATCGGGCAATCGATACGATCTAC-AACGCGTATAAGGCACGTGGCGGG-TACAACTTT- 624 consensus_9648#2 AATCGGGCAATCGATACGATCTAC-AACGCGTATAAGGCACGTGGCGGG-TACAACTTT- 621 consensus_9648#3 AATCGGGCAATCGATACGATCTACGAACGCGTATAAGGCACGTGGCGGGGTACAACTTTT 520 consensus_9648#4 AGGGAGTGGCACTTCACCGCCAACAGGCTCTTTTCCGTTTCGGGATACACTGTCTCGGCA 350 consensus_9648#1 GTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTA-ATTTGTTATTTGTTGAAAC 716 consensus_9648#5 ----------CCGCGGACGCGTGGG--GTTGTGGAATGTA-ATTTGTTGATTGTTGAAAC 47 consensus_9648#0 GTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACA-CTTGG-TCCGCA-TTCAAT 681 consensus_9648#2 GTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACA-CTTGG-TCCGCA-TTCAAT 678 consensus_9648#3 GTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACA-CTTGGGTCCGCNATTCAAT 579 consensus_9648#4 TACAGCTCCCAGGCACGCTTATGAGAACATGCCGGATCTAGACATCCCGGTTGAACGGAA 410 * * * * * consensus_9648#1 GTTGA---ACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTA---- 769 consensus_9648#5 GTTGA---ACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTA---- 100 consensus_9648#0 ACGAA-CGATCTTGGCG-AAGGTTTGG-CGGATGGGCTGAAGGGACTGATCAAGTACGTG 738 consensus_9648#2 ACGAA-CGATCTTGGCG-AAGGTTTGG-CGGATGGGCTGAAGGGACTGATCAAGTACGTG 735 consensus_9648#3 ACGAAGCGATCTTGGCGGAAGGTNTGGGCGGATGGGCTGAAGGGACTGATCAAGTACGTG 639 consensus_9648#4 ACGACGCCGTTGGGATA-AAAATCTGCATCTCCGATTGGATCACGCTTGCCCAGCACCTT 469 ** * ** ** * * consensus_9648#1 ---ATTGA--AATAAATTGAGTTTGAAAAGAAAAAAAAAAAAGGCCACATGTGCCCAGCC 824 consensus_9648#5 ---ATTGA--AATAAATTGAGTTTG----------------------------------- 120 consensus_9648#0 -CCACTGG--AGAAGATTCACCTGATTGGCCACAGCTTGGGCGCACA-CATCGTTGGA-G 793 consensus_9648#2 -CCACTGG--AGAAGATTCATCTGATAGGTG-----CTGGGCGA---------------- 771 consensus_9648#3 GCCACTGG--AGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACAACATCGTTAGGCA 697 consensus_9648#4 CGCATTGGCCAGTAGGCCAACAGTGCTCGAGGAAT------------------------- 504 * ** * * * consensus_9648#1 GCGGGCTA---------------------------------------------------- 832 consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 GTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTG 853 consensus_9648#2 ------------------------------------------------------------ consensus_9648#3 GTGCTTG----------------------------------------------------- 704 consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 ------------------------------------------------------------ consensus_9648#5 ------------------------------------------------------------ consensus_9648#0 ATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGGTGATG 913 consensus_9648#2 ------------------------------------------------------------ consensus_9648#3 ------------------------------------------------------------ consensus_9648#4 ------------------------------------------------------------ consensus_9648#1 -- consensus_9648#5 -- consensus_9648#0 CC 915 consensus_9648#2 -- consensus_9648#3 -- consensus_9648#4 -- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||