These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9666#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1783 fasta sequence [CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA-AG-AG-CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG-GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT-GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA--CGGCGTACACTACGTGTACGA-TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC-GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT-GAGAATGAGGAGGACGG-TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG-CGC-GCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTA-CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCT-CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC-TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA] [+] EMBL BM600956 [CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGAGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA AGCAG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAATAGCGGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGTGGGAACCGAGCGAACCGA ] [+] EMBL BM578557 [ ccgCAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA AGCAG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCGGCTAGCGGAATAACGAGCACAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATACAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGC ] [+] EMBL CNS09P2L [ GGTGTGTGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA AG AG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCGGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCTTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACATCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCA CAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA CGGCGTACACTACGTGTA GATTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAAC ] [+] EMBL CNS09BWL [ TCCACCCATCGTGCTAGAAAGGAAGAGGCGA AG AG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGC AGCG GCAGCTTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGTAGTCTGCCCGCGTTG ] [+] EMBL CNS09BYF [ TGCTAGAAAGGAAGAGGCGA CG AGACAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCGCGCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGC AACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCA ] [+] EMBL CNS08SAO [ AGGCGACAG A CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACGGGGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCA CAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGTAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA CGGCGTACACTACGTGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACCGGGGGTCTCGATTCGGACGAT ] [+] EMBL BX606975 [ GA AGCAG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAG G GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTC ] [+] EMBL BX628023 [ GAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACATCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA CGGCGTACACTACGTGTACGA TCT ] [+] EMBL CNS08OGK [ CCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGC ] [+] EMBL AGA282846 [ CACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA CGGCGTACACTACGTGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAA ] [-] EMBL CNS09P2M [ CGGAAGACCAGATGCCCTACTTTTACGAGAAACCGGGGT ACTACGTGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCAGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGGAGGACGGTTTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG CGC GCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGACGTGCGTGT GTGTA CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACCGGCCGGCGCCGCATAGTTTCTATGCT CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATCCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA] [-] EMBL CNS08SAP [ TGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGATCCCCAATGAGGAGGACGG TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG CGC GCTACAAGGCACGCTTCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTACCGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCTCCGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTC ] [-] EMBL CNS08Y46 [ GGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACGACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACCATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGTAGGACGG TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCG ] [-] EMBL CNS08OGL [ GATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACGACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGGAGGACGC TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGCGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGTTTATG CGC GCTAAAAGGAAGGCAT ] [-] EMBL CNS09BWM [ CTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGGAGGACGC TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG CGC GCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTA CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCT CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTCTCAA ] [-] EMBL CNS09BYG [ CGGGAGGATGTGCGGCGGTACGGGACGGCCTATGCCGCGGCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGC GGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTA CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCT CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGCGTGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATA TTCTCAA ] consensusID : consensus_9666#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 726 fasta sequence [ATCGGCACGAGGCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTACACTACGTGTACGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCATTTAAACGCCGGGCCACACTGCGCACTGCCGGACAACACACACTACCAACTANGACATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTGTGTGTGTGTGAGTGTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGGGCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTCTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATNAGAACAAAAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACAAACTTTCGCTGATAAAANTAT] [+] EMBL BX619794 [ATCGGCACGAGGCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTACACTACGTGTACGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCATTTAAACGCCGGGCCACACTGCGCACTGCCGGACAACACACACTACCAACTANGACATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTGTGTGTGTGTGAGTGTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGGGCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTCTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATNAGAACAAAAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACAAACTTTCGCTGATAAAANTAT] [-] EMBL AGA281223 [ GGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCATTTAAACGCC GGCCACACTGCGCACTGCCGGACAACACACACTACCAACTA GACATAGTGTAATGGCCTAGG AG AGGATCGGCTCGGCGCGTGTGTGTGTGTGAGTGTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGAGTGGTGATTGTCGCAGGGCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTCTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATTAGAACAAAAaa ] consensusID : consensus_9666#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 96 fasta sequence [ACAAACACGGCCGTCCCGCTGTGGCCCTCTCCCTTTAGAGTATATCTTTATCAGCGAAAGTTGTTTGTAAATGTTGTAATCCGGGGGCGTTGTGTT] [+] EMBL CNS08DWZ [ACAAACACGGCCGTCCCGCTGTGGCCCTCTCCCTTTAGAGTATATCTTTATCAGCGAAAGTTGTTTGTAAATGTTGTAATCCGGGGGCGTTGTGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9666#0 CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTC 60 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 TTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGG 120 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 AAAGGAAGAGGCGAAGAGCAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGT 180 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 TGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCC 240 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 ACACAACAAAAAGCAGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATA 300 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 CGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCGG 360 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 CAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCA 420 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 GGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCG 480 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 CACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCC 540 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 AACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAG 600 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 ATCGTCAACTGTACGCGCTCCATCACGAACGTGGAACCGAGCGAACCGAGCGACAACAAT 660 consensus_9666#1 ------------------------------------------------ATCGGCA-CGAG 11 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 GCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAA 720 consensus_9666#1 GCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAA 71 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 GGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGT 780 consensus_9666#1 GGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGT 131 consensus_9666#2 --------------------------------ACAAACACGGCCGTCCCGCTGTGGCCCT 28 * ** ** ** * * ** * consensus_9666#0 CTGCCCGCGTTGTCAGGGGT-AACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGAC 839 consensus_9666#1 CTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGAC 191 consensus_9666#2 CTCCCTTTAGAGTATATCTTTATCAGCGAAAGTTGTTTGTA-AATGTTGTAATCCGGGGG 87 ** ** ** * * * * * * *** * * ** **** consensus_9666#0 AGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAACGGCGTACACTACGTGTA 899 consensus_9666#1 AGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTACACTACGTGTA 251 consensus_9666#2 CGTTGTGTT--------------------------------------------------- 96 * * * * consensus_9666#0 CGATCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAA 959 consensus_9666#1 CGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAA 311 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 TCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACCGGGGTCT 1019 consensus_9666#1 TCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCAT 371 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 CGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCG 1079 consensus_9666#1 TTAAACGC-CGGGCCACACTGCGCACTGCCGGACAACACACACT-----ACCAACTANGA 425 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 CAACGACTATCCGGACGAGGACGAGGA-CGGTCTGGCGGACGGTGCCAGTGTGGGCGAGG 1138 consensus_9666#1 CATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTG-TGTGTGTGTGAGTGTGT 484 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 ACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGG 1198 consensus_9666#1 TCGTCACCACCACCACCATCA-----CCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGG 539 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 ACGAAGACTACGTGCGGTACGATGAGAATGAGGAGGACGGTTCGCTTATCCACGGCACGA 1258 consensus_9666#1 GCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCT 599 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 TGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCG 1318 consensus_9666#1 CTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGA-ATNAGAAC 658 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 GGAGGATGTGCGGCGGTACGGGACGGCCTATGCG-CGCTACAAGGCACGCATCTTGCGCG 1377 consensus_9666#1 AAAAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACA---AACTTTCGCT 715 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 AAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGA 1437 consensus_9666#1 GATAAAANTAT------------------------------------------------- 726 consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 ATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTACGGTGGGAATGAAGGGTGGT 1497 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 AGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCTC 1557 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 GTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTC 1617 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 AAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGCTGCATTTATTCCG 1677 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 TGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTG 1737 consensus_9666#1 ------------------------------------------------------------ consensus_9666#2 ------------------------------------------------------------ consensus_9666#0 TCATGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA 1783 consensus_9666#1 ---------------------------------------------- consensus_9666#2 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||