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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1008 fasta sequence
[AATTCCTCGAGAACTGTTGGCCTACTGGACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC--AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA-CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC-GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC-ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA--GAGTGAGTGGGTGAGTGAGTGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACGAAAAAAACAAACAAAAAAAAAAAAGGCCA]
[-] EMBL CNS08OTD [AATTCCTCGAGAACTGTTGGCCTACTGGACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATAACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGAACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCT GACGATGCCGCACGCCAGCGACGCGCG GCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTtacttc ]
[+] EMBL CNS09PGS [ TGCGATG AATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGC CTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGTTTGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGA GCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGT ]
[+] EMBL CNS099BC [ tggGCGATGCAATAAATTGGTG AATAACAATCTTTCGGCGATTAGTTTATCGTGAAATCGTTGATAAAATAACGCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTG CGAAG CGTAGCACTCACTACCACCCCCTAAAAACAGTCTCATAAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGCATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGC CTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCGCGAAAGGGGCCGAATACTATCGTGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAACAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCAGTGTGTGGATTTCCCT CAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGCTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTTGTTGAGTGAGTGTGCCGGAAAGGAAAGGTATATTATAATAAACTGAAATC ]
[-] EMBL CNS09PGT [ CAATAAATTGGTGAAATAACAATCTTTCGGCGTTTTTTTTTTCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATTACTGGGGAAGAAGTTTTTCATACAAGATTTGGACGAGAAAAACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGAACTTACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGCGCTGGAAGAACTCGAGCAGGACAACTTCCACGAAGACCCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGAAAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTTAGTGCCGCTGAACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGAAACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAA ]
[+] EMBL CNS08OTC [ ttcttaggAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCT GACGATGCCGCACGCCAGCGACGCGCGCGCAAA GCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAATGAAAAAAACAAACAAAAAAAAAAAAGGCCA]
[+] EMBL CNS09HJL [ TTGGTG AATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGC CTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTAC ]
[-] EMBL CNS099BD [ GTTTATCGTGAAATCGTTGATAAAATAACGCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATC TACAAGATTTGGACGAGAAGCACCTATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTG CGAAGCCGTAGAACTCACTACCACCCCCTAAAAACAGTCTCATAAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGCATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCGCGAAAGGGGCCGAATACTATCGTGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAACAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCAGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGACAACGCGCTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGTTGAGTGAGTGTGCCGGAAAGGAAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACGAAAAAAACAAAa ]
[+] EMBL BX625174 [ AACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAACGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGCGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTG ]
[-] EMBL CNS09HJM [ GGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGAACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGC CGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCT ]
[+] EMBL AGA285159 [ AAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAACGACGCGCGCG ]
[+] EMBL AGA284893 [ TCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC ]
[+] EMBL BX612883 [ CTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAACGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGCGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCTTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGGTGCTTGAAATGGACCGCCTAGAGGACTAAGTGAGTGAGTGAGTGAGTGAGTGTGCCAGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCT ]
[-] EMBL AGA283866 [ AATTCAGCGACAATCTCGATGGCAGCGGACCGAGCAAGAAGAAACACCCCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGGTGCTTGAAATGGACCGCCTAGAGGACTAAGTGAGTGAGTGAGTGAGTGAGTGTGCCAGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACAAAA ]
[-] EMBL CNS09BA9 [ TGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAACGGGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGATACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTATACGTGCACTGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCA ]
[-] EMBL AGA283604 [ CAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGNGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGGTGCTTGAAATGGACCGCCTAGAGGACTAAGTGAGTGAGTGAGTGAGTGAGTGTGCCAGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACAAAA ]
consensusID : consensus_9667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 961 fasta sequence
[ACTCNCCCCGCCGGTTTTAACGCAATCACTGGGNGCAAGAACGTTTATCATACAACGCATTTGGACGACGACTGCACCTGTTCATTTCTGTGTCGAAATCTGTCGAAGTACTGCAATGCCCTGCGTGGACGATTTGATGGACCGCATCAGCTTCCCTGCTACACTGAGCAAAGAATGCTTAAAAACATACCATCCTTGCCTGAATGCCCGTAGCAACTCACCTACCAACCTTGTAANACCAAACACTCTCAAAAACTCAACCTCCCAAACAAAGAACTTGTGGCCCCTGGGGCNCCGCACGGCAAACTTCCGGGGGAACCGGTAATTCCCGCGGCGCAAGTGGCCGGGAACCAAAACAACAACGGCCGAAGAAGCCCACCTTGGCGCGAACCGNGAACTTGGCCCTGGCCCAACCTGGCCCCAACAACCGGCACCCGGCCGGCTGGCCGCCAAAGANATACGGGCCAGGCCCCCGTNGCGAGCCAACAACGGGACGCNAACCCTTCCGGGAATGCACCCGAAGGAGGGAANCACAAAGCCACGTTACTCNACCAAACCATGCAACAAGGGAAACGCCCACCTGGAGCAACACCGNGCCGTGTGGANACCCCCCATTGGTGGACTATCCAACGTTGGNTTTCCCGGAACACCGCAAAACGNTGGCTGTGGACCGCCCCTCACAAGACAAGACCATTTTACCCAAAAACGCGCCCGGGGAACAGCCCCNATCGACGCTANNCCCGTTTTNCCGGGNCGAACNANTTGGTAGGGGCACCGCTANATGGCACCCAGGGNGGGGGAACCGCANCCCGGGGAATAATGGCCGCAACAAAAGTTGGCAGAAGCAACCGGGGTAAAGNCCAACAACCACGAAACGCANCCCGGGAGCCACCCCCNGGAAGCCTACNCCCCGGGCCAACCACAGCCACACAGGGGGGGGCAGGGTACCACCCCCTGGGGA]
[+] EMBL AL692553 [ACTCNCCCCGCCGGTTTTAACGCAATCACTGGGNGCAAGAACGTTTATCATACAACGCATTTGGACGACGACTGCACCTGTTCATTTCTGTGTCGAAATCTGTCGAAGTACTGCAATGCCCTGCGTGGACGATTTGATGGACCGCATCAGCTTCCCTGCTACACTGAGCAAAGAATGCTTAAAAACATACCATCCTTGCCTGAATGCCCGTAGCAACTCACCTACCAACCTTGTAANACCAAACACTCTCAAAAACTCAACCTCCCAAACAAAGAACTTGTGGCCCCTGGGGCNCCGCACGGCAAACTTCCGGGGGAACCGGTAATTCCCGCGGCGCAAGTGGCCGGGAACCAAAACAACAACGGCCGAAGAAGCCCACCTTGGCGCGAACCGNGAACTTGGCCCTGGCCCAACCTGGCCCCAACAACCGGCACCCGGCCGGCTGGCCGCCAAAGANATACGGGCCAGGCCCCCGTNGCGAGCCAACAACGGGACGCNAACCCTTCCGGGAATGCACCCGAAGGAGGGAANCACAAAGCCACGTTACTCNACCAAACCATGCAACAAGGGAAACGCCCACCTGGAGCAACACCGNGCCGTGTGGANACCCCCCATTGGTGGACTATCCAACGTTGGNTTTCCCGGAACACCGCAAAACGNTGGCTGTGGACCGCCCCTCACAAGACAAGACCATTTTACCCAAAAACGCGCCCGGGGAACAGCCCCNATCGACGCTANNCCCGTTTTNCCGGGNCGAACNANTTGGTAGGGGCACCGCTANATGGCACCCAGGGNGGGGGAACCGCANCCCGGGGAATAATGGCCGCAACAAAAGTTGGCAGAAGCAACCGGGGTAAAGNCCAACAACCACGAAACGCANCCCGGGAGCCACCCCCNGGAAGCCTACNCCCCGGGCCAACCACAGCCACACAGGGGGGGGCAGGGTACCACCCCCTGGGGA]
consensusID : consensus_9667#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 645 fasta sequence
[CCGCAACAACGCCGTGCGAGCGGTTTGTTTACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGACGATTAGTTTATCGTGAAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAATCTACCATTCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTCAAACTCAACTACAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACGCTGACCTGGTCATGGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGACCGCACGAAA]
[+] EMBL BM591442 [CCGCAACAACGCCGTGCGAGCGGTTTGTTTACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGACGATTAGTTTATCGTGAAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAATCTACCATTCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTCAAACTCAACTACAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACGCTGACCTGGTCATGGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGACCGCACGAAA]
[+] EMBL CNS09BA8 [ GTGCGAGCGGTTTGTTTACATTGTCTGCAATGCAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTAATGAAAGGAGTGCTCGTTGAATGTAATCCGGCTATGAAACAATTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTT ]
consensusID : consensus_9667#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 438 fasta sequence
[CAGGCAAGAATCGCGCACGAGGTGTCACTGTTCATTTCGGTCGAAATCGTTCGAAGATTAACTGGCAAGCCGCGTGGACGATTTGATTGGACCCGCATCAGCTTTCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCGAAGCCGTACACTCACTACCAACCTGTAAACAAACGTTCTCAAACTCAACTCCAACGAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGNGCGGACAAAAAGCGAACCCTGGACGATGCCGNACGCCAACGACAGCGGCGCGCAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACAGCGGACCTAGTCATGTACGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGCAGCGGACCGAGCACAGAAGAAACACCGCGCACGAAAGGGGCCG]
[+] EMBL BX469761 [CAGGCAAGAATCGCGCACGAGGTGTCACTGTTCATTTCGGTCGAAATCGTTCGAAGATTAACTGGCAAGCCGCGTGGACGATTTGATTGGACCCGCATCAGCTTTCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCGAAGCCGTACACTCACTACCAACCTGTAAACAAACGTTCTCAAACTCAACTCCAACGAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGNGCGGACAAAAAGCGAACCCTGGACGATGCCGNACGCCAACGACAGCGGCGCGCAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACAGCGGACCTAGTCATGTACGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGCAGCGGACCGAGCACAGAAGAAACACCGCGCACGAAAGGGGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9667#0 ---------AATTCCTCGAGAACTGTTGGCCTACTGGACATTGTCTGCGATGCAATAAAT 51
consensus_9667#2 --CCGCAACAACGCCGTGCGAGCGGTTTGTTTAC-----ATTGTCTGCGATGCAATAAAT 53
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 ACTCNCCCCGCCGGTTTTAACGCAATCACTGGGNGCAAGAACGTTTATCATACAACGCAT 60
consensus_9667#0 TGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCA 111
consensus_9667#2 TGGTGAAATAACAATCTTTCGACGATTAGTTTATCGTGAAATCGTTGATAAAACAACCCA 113
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 TTGGACGACGACTG-CACCTGTTCATTTCTGTGTCG-AAATCTGTCGAAGTACTGCAATG 118
consensus_9667#0 CACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATG 171
consensus_9667#2 CACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATG 173
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 CCCTGCGTGGACGATTTGATGGACCGCATCAGCTTCCCTGCTACAC-TGAGCAAAGAATG 177
consensus_9667#0 ---AAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAG-AAGTTTATCAT 227
consensus_9667#2 ---AAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAG-AAGTTTATCAT 229
consensus_9667#3 ---------------------------------------------------------CAG 3
consensus_9667#1 CTTAAAAACATACCATCCTTGCCTGAATGCCCGTAGCAACTCACCTACCAACCTTGTAAN 237
*
consensus_9667#0 ACAAGATTTGGACGAGAAGCACC-TG-TTCATTTCGGTCGAAATCGT-CGAAGT---ACT 281
consensus_9667#2 ACAAGATTTGGACGAGAAGCACC-TGATTCATTTCGGTCGAAATCGT-CGAAGT---ACT 284
consensus_9667#3 GCAAGAATCGCGCACGAGGTGTCACTGTTCATTTCGGTCGAAATCGTTCGAAGATTAACT 63
consensus_9667#1 ACCAAACACTCTCAAAAACTCAA------CCTCCCAAACAAAGAACT-TGTGGCC--CCT 288
* * * * * * * * * ** * * * **
consensus_9667#0 GCAAGCCCGCGTGGACGATTTGATGGA--CCGCATCAGCTTCCCGCTACACGAGAAAGAA 339
consensus_9667#2 GCAAGCCCGCGTGGACGATTTGATGGA--CCGCATCAGCTTCCCGCTACACGAGAAAGAA 342
consensus_9667#3 GGCAAGCCGCGTGGACGATTTGATTGGACCCGCATCAGCTTTCCGCTACACGAGAAAGAA 123
consensus_9667#1 GGGGCNCCGCACGGCAAACTTCCGGGGGAACCGGTAATTCCCGCGGCGCAAGTGGCCGGG 348
* **** ** * ** * * * * ** ** * * *
consensus_9667#0 GCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAAC-- 397
consensus_9667#2 GCTTAAAT-CTACCATTCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAAC-- 399
consensus_9667#3 GCTTAAAAACTACCATCCTGC-GAAGCCGTA-CACTCACTACCAACCTGTAAACAAACGT 181
consensus_9667#1 AACCAAAA-CAACAA--CGGCCGAAGAAG------------CCCACCTTGGCGCGAAC-- 391
*** * ** * * ** **** * * **** * ***
consensus_9667#0 TCTCAAACTCAACTCCAAC--AAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGG-C 454
consensus_9667#2 TCTCAAACTCAACTACAAC--AAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGG-C 456
consensus_9667#3 TCTCAAACTCAACTCCAACG-AAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGNGC 240
consensus_9667#1 -CGNGAACTTGGCCCTGGCCCAACCTGGCC--CCAACAACCGGCACCCGGCCGGCTGGCC 448
* **** * * ** **** * ** *** ** **** * *
consensus_9667#0 GGACAAAAAGCG-AACCCTGGACGATGCCGCACGCCAGCGACGC--GCGCGCAAA-GCGC 510
consensus_9667#2 GGACAAAAAGCG-AACCCTGGACGATGCCGCACGCCAGCGACGC--GCGCGAAAA-GCGC 512
consensus_9667#3 GGACAAAAAGCG-AACCCTGGACGATGCCGNACGCCAACGACAGCGGCGCGCAAAAGCGC 299
consensus_9667#1 GCCAAAGANATACGGGCCAGGCCCCCGTNGCGAGCCAACAACGG-GACGCNAACCCTTCC 507
* ** * ** ** * * * **** * ** *** * *
consensus_9667#0 TGGAA-GCACTCGAGCAGGACAACTTCCACGAAGACCCGCAC-GCGGACCTGGTCATG-- 566
consensus_9667#2 TGGAA-GCACTCGAGCAGGACAACTTCCACGAAGACCCGCAC-GCTGACCTGGTCATGG- 569
consensus_9667#3 TGGAA-GCACTCGAGCAGGACAACTTCCACGAAGACCCGCACAGCGGACCTAGTCATGT- 357
consensus_9667#1 GGGAATGCACCCGAAGGAGGGAA---NCACAAAGCCACGTTA-CTCNACCAAACCATGCA 563
**** **** *** * ** *** *** * ** *** ****
consensus_9667#0 TCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCA-AGAAGAA 625
consensus_9667#2 TCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCA-AGAAGAA 628
consensus_9667#3 ACGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATG-CAGCGGACCGAGCACAGAAGAA 416
consensus_9667#1 ACAAGGGAAACGCCCACCTGGAGCAACA-CCGNGCCGTGTGGANACCCCCCATTGGTGGA 622
* * * * ***** * *** *** * * * * *** ** * * *
consensus_9667#0 ACACCG-CCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGC 684
consensus_9667#2 ACACCGACCGCACGAAA------------------------------------------- 645
consensus_9667#3 ACACCG--CGCACGAAAGGGGCCG------------------------------------ 438
consensus_9667#1 CTATCCAACGT-TGGNTTTCCCGGAACAC-----CGCAAAACGNTGGCTGTGGACCGCCC 676
* * ** *
consensus_9667#0 AGCTGCTGGATGAGGAACGGCAGCAGCGACCGGATCCGCCGAACTATTTCAGT-GCCGCT 743
consensus_9667#2 ------------------------------------------------------------
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 CTCACAAGACAAGACCATTTTACCCAAAAACGCGCCCGGGGAACAGCCCCNATCGACGCT 736
consensus_9667#0 GCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGC 803
consensus_9667#2 ------------------------------------------------------------
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 ANNCCCGTTTTNCCG--GGNCGAACNANTTGGTAGGGGCACCGCTANATGGCACCCAGGG 794
consensus_9667#0 TACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAG 863
consensus_9667#2 ------------------------------------------------------------
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 NGGGGGAACCGCANCCCGGGGAATAATGGCCGCAACAAAAGTTG---------GCAGAAG 845
consensus_9667#0 GACACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTAGAGTGAGTGGGTGAGTGAGTGT 923
consensus_9667#2 ------------------------------------------------------------
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 CAACCGGGGTAAAGNCCAACAACCACGAAACGCANCCCGGGAGCCACCCCCNGGAAGCCT 905
consensus_9667#0 GCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACGAAAA 983
consensus_9667#2 ------------------------------------------------------------
consensus_9667#3 ------------------------------------------------------------
consensus_9667#1 ACNCCCCGGGCCAACCACAGCCACACAGGGGGGGGCAGGGTACCACCCCCTGGGGA---- 961
consensus_9667#0 AAACAAACAAAAAAAAAAAAGGCCA 1008
consensus_9667#2 -------------------------
consensus_9667#3 -------------------------
consensus_9667#1 -------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||