These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9672#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 960 fasta sequence [CCGCCCACGCGTCCG-CCAAAACAACAGATCCCGGTTTGGCCGGTACCGGACAGCAGTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGTGGAGCAGCAGGCGCGCCACCGATGACGGCCTGCCGGATGCCATCATCCTCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTG-TTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTCTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGG-CCGGCCACCACG-TTCGACTTTGGGC-TGGCGATCGGGGCGGCACTGGTC-GGGCAGG-AGGTGG-CCGA-CAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGGGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTTGGGGACAATTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAAAATAATATGATTATCAAACTCAATAAAACATAAAGCCAG] [+] EMBL BM596766 [CCGCCCACGCGTCCG CCAAAACAACAGATCCCGGTTTGGCCGGTACCGGACAGCAGTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT ] [+] EMBL BM610195 [ CCGACCAAAACAACAGATCCCGGTTTGGCCGGTACCGGACAGCAGTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT ] [+] EMBL BX619385 [ ccgaggCCCGGTTTGGCCGGTACCGGACAGCAGTTTCCCGTGAATTTTCTGGTCTGCGAAGCCCATCACTTTTCGTAAAAAAACAACAACCGCCCATTAGCAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAACTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT ] [+] EMBL BX628381 [ GCCGGTACCGGACAGCAGTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCNAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT ] [-] EMBL CNS08E2W [ TGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGAAGGCGTACGTGGAGCAGCAGGCGCGCCACCGATGACGGCCTGCCGGATGCCATCATCCTCCCTGGGGGGCTCGGGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATTTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTGTTTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTTTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGG CCGGCCACCACG TTCGACTTTGGGC TGGCGATCGGGGCGGCACTGGTC GGGCAGG AGGTGG CCGA CAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGGGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTTGGGGACAATTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAAAATAATATGATTATCAAACTCAATAAAACATAAAGCCAG] [+] EMBL CNS08E2V [ ATCATCCTCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTG TTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTCTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGG CCGGCCACCACG TTCGACTTTGGGC TGGCGATCGGGGCGGCACTGGTC GGGCAGG AGGTGG CCGA CAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTTTGTGAGTTCGCGTGTGTTACTTTTGGGGACAATTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAAAAAACAAACACAAAATAAT ] [+] EMBL BX467976 [ ATCATCCTCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTG TTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTCTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCCGGCCACCACGTTTCGACTTTGGGCTTGGCGATCGGGGCGGCACTGGTCGGGGCAGGAAGGTGGCCCGACCAAGGTTGC ] consensusID : consensus_9672#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 938 fasta sequence [ATCGCCACGCAGGTTACAGCCATTACAACAGCGTTCATGATGGCTAGCAACCATAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGGCGGCAATACCGAGCCGCTCGTGGCCTGCTGGTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGTGGAGCAGCAGGTCTGCCACCGATGACGGCCTGCCGGATGCCATCATCCCCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTGTTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTCTCGGG-CGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTT-GGGGACAATTAGCAGCGAAGACCAAAAATTGGAAAAAAACGATTTTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAGAATAATATGATTATCAAACTCAATAAAACATAAAGCCAGTTTGTAATATTTGAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AL696335 [ATCGCCACGCAGGTTACAGCCATTACAACAGCGTTCATGATGGCTAGCAACCATAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGGCGGCAATACCGAGCCGCTCGTGGCCTGCTGGTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGTGGAGCAGCAGGTCTGCCACCGATGACGGCCTGCCGGATGCCATCATCCTCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGNCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCGACGGTGCTGGCCG CCACGGGAAGCTGTTCGCCGGCCGGCGCCTCA CTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGG CGG GGTCTCGGGCCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCANGAGGTGG CGACAAG ] [+] EMBL CNS08RZH [ ATCATCCCCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTGTTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTCTCGGG CGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAAGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTTGGGGGACAATTAGCAGCGAAGACCAAAAATTGGAAAAAAACGATTTTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAGAATAATATGATTATCAAACTCAATAAAACATAAAGCCAGTTTGTAATATTTGAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CNS08RZI [ TCATCCCCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATTTGTGCCGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTGTTCGCCGGCCGGCGCCTCACCTCCTACCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTTTCGGG CGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTT GGGGACAATTAGCAGCGAAGACCAAAAATTGGAAAAAAACGATTTTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAGAATAATATGATTATCAAACTCAATAAAACATAAAGCCAGTTT ] [-] EMBL AGA284462 [ TGGGTACCGGTGGGAGGAACCGGCGGCCGGCGGTCTCGGG CGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTT GGGGACAATTAGCAGCGAAGACCAAAAATTGGAAAAAAACGATTTTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAGAATAATATGATTATCAAACTCAATAAAACATAAAGCCAGTTTGTAAaaaaaa ] consensusID : consensus_9672#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [CCCCGAGGTTTATTGCAGCACAAGCGCGCCCTTGCCCTGATCGCCNNGCGGTTCTGGAGTGAGATGGAGCTCGTCATTACCTGTCGATGTGCTGCTGCCGCTGTAACGTCGAGGTTACCTGTTGCTGCTGGTGCAGGAGTGCGGAGTGGCACAGCTGGCCTGGCAATACCGATGCCTGCTCGTGGCCTGCTGCTCCCTGCTGGCTGTTAACTGTGAATGTGCTGGACACCACGCTGCAGTGCTGTACGTGGAGCAGCAGGCTGCACCGATTGACTNGCCTGCGGATGCCATCATCCTCCCTGGGGGGCTCGAGTGGCGCAANAANGCGATTGGCTCCAATGCTGCCGGCGGTCTGNGCGCTGCTTGNTTGGTAGCGCCAGGCCCGGGTCGGCAATGCTTGGTCGCGGCCATCTTGTGCCTGCNGCCTGCACGGTTGCTTGGCCTGCCACGGAAAGCTGTTCGCCGGCCGGTGCCTCANCTCCTACCCGTACCTTCCGGGACGAAGCTGCATGGCTGGACTGGTGTACCGGTGGGAGGAACCGGCGTGCCTGGCGGATCTCGTGATGCGGGTCGTACGGGACGAGAACCTCATTANNCAGCCTCGTNTCGCCGGCACACACGTTCGACCTTTTGNGCGNGCCTGGCNGATCGNGGGCCGGCACTGTGTTCNNNGTGCNANAGAGGTTGGCCG] [+] EMBL AL694157 [CCCCGAGGTTTATTGCAGCACAAGCGCGCCCTTGCCCTGATCGCCNNGCGGTTCTGGAGTGAGATGGAGCTCGTCATTACCTGTCGATGTGCTGCTGCCGCTGTAACGTCGAGGTTACCTGTTGCTGCTGGTGCAGGAGTGCGGAGTGGCACAGCTGGCCTGGCAATACCGATGCCTGCTCGTGGCCTGCTGCTCCCTGCTGGCTGTTAACTGTGAATGTGCTGGACACCACGCTGCAGTGCTGTACGTGGAGCAGCAGGCTGCACCGATTGACTNGCCTGCGGATGCCATCATCCTCCCTGGGGGGCTCGAGTGGCGCAANAANGCGATTGGCTCCAATGCTGCCGGCGGTCTGNGCGCTGCTTGNTTGGTAGCGCCAGGCCCGGGTCGGCAATGCTTGGTCGCGGCCATCTTGTGCCTGCNGCCTGCACGGTTGCTTGGCCTGCCACGGAAAGCTGTTCGCCGGCCGGTGCCTCANCTCCTACCCGTACCTTCCGGGACGAAGCTGCATGGCTGGACTGGTGTACCGGTGGGAGGAACCGGCGTGCCTGGCGGATCTCGTGATGCGGGTCGTACGGGACGAGAACCTCATTANNCAGCCTCGTNTCGCCGGCACACACGTTCGACCTTTTGNGCGNGCCTGGCNGATCGNGGGCCGGCACTGTGTTCNNNGTGCNANAGAGGTTGGCCG] consensusID : consensus_9672#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 339 fasta sequence [CAGAATCGGNCGAGGCCNGTNTTGGCGGTACGGACAGCAGCTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] [+] EMBL BX466329 [CAGAATCGGNCGAGGCCNGTNTTGGCGGTACGGACAGCAGCTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] [+] EMBL BM616806 [ ccgTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] [+] EMBL BM577254 [ ccgGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] [+] EMBL AGA285767 [ ACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] consensusID : consensus_9672#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGGGACAGCAGTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGTTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] [+] EMBL BM597708 [CCGCGGACGCGTGGGCGGACGCGTGGGGGACAGCAGTTTCCCGTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGTTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] consensusID : consensus_9672#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 305 fasta sequence [GGTACCGGTGGGAGGAACCGNNCGTCCGGCGGTCTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTTGGGGACAATTAGCAGCGAAGACCCAAAAANNNCAACNAAAAGACAGCATGGTGCGCCGCC] [-] EMBL BX466788 [GGTACCGGTGGGAGGAACCGNNCGTCCGGCGGTCTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGCCGGTCTGCTCTACAAGTGAGGGAGGGGCCACGCGGGACGAAATTTTCTCTAGTGTGTGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTTGGGGACAATTAGCAGCGAAGACCCAAAAANNNCAACNAAAAGACAGCATGGTGCGCCGCC] consensusID : consensus_9672#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 289 fasta sequence [GCCCGAGGTTNCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCTGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] [+] EMBL AL933691 [GCCCGAGGTTNCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTAACAACAGCGTTATGATGGCAGCAACCAAGCGCGCCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGCTGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCTGCCGGCAATACCGAGCCGCTCGTGGCCTGCTGCTCCCGCGGCGTTAACGTGAAGGCGGACACCACGCTGCAGGCGTACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 ------------------------------------------------------------ consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 ATCGCCACGCAGGTTACAGCCATTACAACAGCGTTCATGATGGCTAGCAACCATAGCGCG 60 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 ------------------------------------------------------------ consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 CCCTTGCCCTGATCGCCCGCGGTTCGGAGGAGATGGAGCTCGTCATTACCGTCGATGTGC 120 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 ------------------------------------------------------------ consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 TGCGCCGCTGTAACGTCGAGGTTACCGTTGCGCTGGTGCAGGAGGCGGAGGGCACAGCGG 180 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 ------------------------------------------------------------ consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 GCGGCAATACCGAGCCGCTCGTGGCCTGCTGGTCCCGCGGCGTTAACGTGAAGGCGGACA 240 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 ------------------------------------------------------------ consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 CCACGCTGCAGGCGTACGTGGAGCAGCAGGTCTGCCACCGATGACGGCCTGCCGGATGCC 300 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 ------------------------------------------------------------ consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 ATCATCCCCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGCGGTCGGC 360 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 --------------------------------------------------------CCGC 4 consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 GCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGCCGCGCCG 420 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 -----------CAGAATCGGNCGAGGCCNGTNTTG--GCGGTACGGACAGCAGCTTTCCC 47 consensus_9672#4 -----------------CCGCGGACGCGTGGGCGGACGCGTGGGGGACAGCAG-TTTCCC 42 consensus_9672#6 ----------------------------------------------------------GC 2 consensus_9672#0 CCACGCGTCCGCCAAAACAACAGATCCCGGTTTGGCCG-GTACCGGACAGCAG-TTTCCC 62 consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 ACGGTGCTGGCCGCCCACGGCAAGCTGTTCGCCGGCCGGCGCCTCACCTCCTACCCGTCC 480 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 GTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTA 107 consensus_9672#4 GTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTA 102 consensus_9672#6 CCGAGGTTN-----CTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTA 57 consensus_9672#0 GTGAATTTTCTAGTCTGCGAAGCCCATCACTTTTCGTAACAAAACAACAACCGCCCATTA 122 consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 TTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGG-CCGGCGGTCT 539 consensus_9672#5 -------------------------GGTACCGGTGGGAGGAACCGNNCGTCCGGCGGTCT 35 consensus_9672#3 ACAACAGCGTTATGATGGCAGCAAC--CAAGCGCGCCCTTGCCCTGATCGCCCG---CGG 162 consensus_9672#4 ACAACAGCGTTATGATGGCAGCAAC--CAAGCGCGCCCTTGCCCTGATCGCCCG---CGG 157 consensus_9672#6 ACAACAGCGTTATGATGGCAGCAAC--CAAGCGCGCCCTTGCCCTGATCGCCCG---CGG 112 consensus_9672#0 ACAACAGCGTTATGATGGCAGCAAC--CAAGCGCGCCCTTGCCCTGATCGCCCG---CGG 177 consensus_9672#2 -CCCCGAGGTTT--ATTGCAGCA----CAAGCGCGCCCTTGCCCTGATCGCCNNG--CGG 51 consensus_9672#1 CGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGA 599 consensus_9672#5 CGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCACGTTCGA 95 * * * ** * *** * * * * ** ** consensus_9672#3 TTC-GGAG--GAGATGGAGCTCGTCATTACC-GTCGATGTGCTGC-GCCGCTGTAACGTC 217 consensus_9672#4 TTC-GGAG--GAGATGGAGCTCGTCATTACC-GTCGATGTGTTGC-GCCGCTGTAACGTC 212 consensus_9672#6 TTC-GGAG--GAGATGGAGCTCGTCATTACC-GTCGATGTGCTGC-GCCGCTGTAACGTC 167 consensus_9672#0 TTC-GGAG--GAGATGGAGCTCGTCATTACC-GTCGATGTGCTGC-GCCGCTGTAACGTC 232 consensus_9672#2 TTCTGGAGT-GAGATGGAGCTCGTCATTACCTGTCGATGTGCTGCTGCCGCTGTAACGTC 110 consensus_9672#1 CTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGC 659 consensus_9672#5 CTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGTTGCCGC 155 * ** * *** * * * * * * * * ** * * ** * * consensus_9672#3 GAGGTTACC-GTTGC-GCTGGTGCAGGAG-GCGGAG-GGCACAGCGG--CCGGCAATACC 271 consensus_9672#4 GAGGTTACC-GTTGC-GCTGGTGCAGGAG-GCGGAG-GGCACAGCGG--CCGGCAATACC 266 consensus_9672#6 GAGGTTACC-GTTGC-GCTGGTGCAGGAG-GCGGAG-GGCACAGCTG--CCGGCAATACC 221 consensus_9672#0 GAGGTTACC-GTTGC-GCTGGTGCAGGAG-GCGGAG-GGCACAGCGG--CCGGCAATACC 286 consensus_9672#2 GAGGTTACCTGTTGCTGCTGGTGCAGGAGTGCGGAGTGGCACAGCTGGCCTGGCAATACC 170 consensus_9672#1 CGGTCTGCT--CTACAAGTGAGGGAGGGG--CCACGCGGGACGAAATTTTCTCTAGTGTG 715 consensus_9672#5 CGGTCTGCT--CTACAAGTGAGGGAGGGG--CCACGCGGGACGAAATTTTCTCTAGTGTG 211 * * * * * ** * *** * * * ** ** * * consensus_9672#3 GAG--CCGCTCGTG-------GCCTGCTGCTCCC-GCGG--CGTTAAC-GTGAAGGCG-- 316 consensus_9672#4 GAG--CCGCTCGTG-------GCCTGCTGCTCCC-GCGG--CGTTAAC-GTGAAGGCG-- 311 consensus_9672#6 GAG--CCGCTCGTG-------GCCTGCTGCTCCC-GCGG--CGTTAAC-GTGAAGGCG-- 266 consensus_9672#0 GAG--CCGCTCGTG-------GCCTGCTGCTCCC-GCGG--CGTTAAC-GTGAAGGCG-- 331 consensus_9672#2 GATGCCTGCTCGTG-------GCCTGCTGCTCCCTGCTGGCTGTTAACTGTGAATGTGCT 223 consensus_9672#1 TGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTT-GGGGACAATTAGCAGCGAAGACC-A 773 consensus_9672#5 TGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTT-GGGGACAATTAGCAGCGAAGACCCA 270 * * *** * ** * ** * * *** * * *** consensus_9672#3 -GACACCACGCTGCAGG--CGTACGT---------------------------------- 339 consensus_9672#4 -GACACCACGCTGCAGG--CGTACGT---------------------------------- 334 consensus_9672#6 -GACACCACGCTGCAGG--CGTACGT---------------------------------- 289 consensus_9672#0 -GACACCACGCTGCAGG--CGTACGTGGAGCAGCAGGCGCGCCACCGATGACGGCCTGCC 388 consensus_9672#2 GGACACCACGCTGCAGTGCTGTACGTGGAGCAGCAGGCTGCACCGATTGACTNGCCTGCG 283 consensus_9672#1 AAAATTGGAAAAAAACGATTTTATGAATCAGTTTGGGCTAATTTAAATGTGGATAGTTTG 833 consensus_9672#5 AAAANNNCAACNAAAAGACAGCATGGTGCGCCGCC------------------------- 305 * * * * consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 GGATGCCATCATCCTCCCTGGGGGGCTCGAGGGCGCAAAAGCGATGGCCCAAGCGCCGGC 448 consensus_9672#2 GATGCCATCATCCTCCCTGGGGGGCTCGAGTGGCGCAANAANGCGATTGGCTCCAATGCT 343 consensus_9672#1 TTTTTGGTTTTGTTTGAATAAACAAACACAGAATAATATGATTATCAAACTCAATAAAAC 893 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 GGTCGGCGCGCTGCTGGAGCGCCAGGCCCGGGTCGGCAAGCTGGTCGCGGCCATCTGTGC 508 consensus_9672#2 GCCGGCGGTCTGNGCGCTGCTTGNTTGGTAGCGCCAGGCCCGGGTCGGCAATGCTTGGTC 403 consensus_9672#1 ATAAAGCCAGTTTGTAATATTTGAAAAAAAAAAAAAAAAAAAAAA--------------- 938 consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 CGCGCCGACGGTGCTGGCCGCCCACGGCAAGCTGTTCGCCGGCCGGCGCCTCACCTCCTA 568 consensus_9672#2 GCGGCCATCTTGTGCCTGCNGCCTGCACGGTTGCTTGGCCTGCCACGGAAAGCTGTTCGC 463 consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 CCCGTCCTTCCGGGAGAAGCTGCAGGCGGATGGGTACCGGTGGGAGGAACCGGCGGCCGG 628 consensus_9672#2 CGGCCGGTGCCTCANCTCCTACCCGTACCTTCCGGGACGAAGCTGCATGGCTGGACTGGT 523 consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 CGGTCTCGGGCGGGTCGTACGGGACGAGAACCTCATTACCAGCCTCGGGCCGGCCACCAC 688 consensus_9672#2 GTACCGGTGGGAGGAACCGGCGTGCCTGGCGGATCTCGTGATGCGGGTCGTACGGGACGA 583 consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 GTTCGACTTTGGGCTGGCGATCGGGGCGGCACTGGTCGGGCAGGAGGTGGCCGACAAGGT 748 consensus_9672#2 GAACCTCATTANNCAGCCTCGTNTCGCCGGCACACACGTTCGACCTTTTGNGCGNGCCTG 643 consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 TGCCGCCGGTCTGCTCTACAAGTGAGGGGGGGGCCACGCGGGACGAAATTTTCTCTAGTG 808 consensus_9672#2 GCNGATCGNGGGCCGGCACTGTGTTCNNNGTGCNANAGAGGTTGGCCG------------ 691 consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 TGTGTGTGTTTGTGAGTGCGCGTGTGTTACTTTTGGGGACAATTATGAATCAGTTTGGGC 868 consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 ------------------------------------------------------------ consensus_9672#4 ------------------------------------------------------------ consensus_9672#6 ------------------------------------------------------------ consensus_9672#0 TAATTTAAATGTGGATAGTTTGTTTTTGGTTTTGTTTGAATAAACAAACACAAAATAATA 928 consensus_9672#2 ------------------------------------------------------------ consensus_9672#1 ------------------------------------------------------------ consensus_9672#5 ------------------------------------------------------------ consensus_9672#3 -------------------------------- consensus_9672#4 -------------------------------- consensus_9672#6 -------------------------------- consensus_9672#0 TGATTATCAAACTCAATAAAACATAAAGCCAG 960 consensus_9672#2 -------------------------------- consensus_9672#1 -------------------------------- consensus_9672#5 -------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||