These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9693#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 742 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA-TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA-GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC-GACAACC-GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAAAGACCAAAAAAAA] [+] EMBL BM576047 [CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGGACAACCGGGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATA ] [+] EMBL BM608431 [ ccgAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATC ] [+] EMBL BM587887 [ ccgGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTCCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCA ] [+] EMBL BM610931 [ ccgCCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAA ] [+] EMBL BX629034 [ AAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAA ] [+] EMBL BX614396 [ CTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATTCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAAT ] [+] EMBL BX613345 [ AACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAA ] [+] EMBL BX627383 [ CCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACNAACCTTCGTGACGAAAGGTCACATCCGC AAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTT ] [+] EMBL AGA282387 [ GCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCNACACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAG ] [+] EMBL BX620023 [ ATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTA ] [-] EMBL AGA280764 [ TCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTGTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAAAGACCAAAAAAAA] consensusID : consensus_9693#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 702 fasta sequence [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA-ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG-GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGA-CGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC] [+] EMBL BM591951 [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTACAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGAT ] [+] EMBL BM591955 [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG GGCAGCGTGCTGCTGCTGT ] [+] EMBL BM618032 [ ccgGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGTAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCAAAGGAAAGCGTCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGA CGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC] [+] EMBL BX621077 [ AAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGTAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAACAAAACAAGCACTATCCGGAAAAAACACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCTCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTCAAGGAGCTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGACCGGGAACTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAAAC GGCGTGCGTGTGTGAAGAAGC AAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAG ] [+] EMBL BX621842 [ TATGTGTCNCCGGTCAATCCGGNCGTATTCCCGCACCTGNACCAGCGTGCTGCTGCTGTTCNGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAA ] consensusID : consensus_9693#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence [TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGGGCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCACCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTCCNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCCCNCACCCACACCTACNCGACGACGCACC] [+] EMBL AL695483 [TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGGGCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCACCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTCCNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCCCNCACCCACACCTACNCGACGACGCACC] consensusID : consensus_9693#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 642 fasta sequence [GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAA-CCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA-ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCA-CTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG] [+] EMBL AL693654 [GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAA CCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCA CTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG] [+] EMBL AL931706 [ GCCCGAGGTTT CTTGTGCAGAAAAAGCGAACCCGCACGTAGT AAAGTAGCTTG TTTTGTAAAATAGCTGTAATTCTACTACCACTAGTC AACCAACCCTTTGCCGGCACACCGCAACAAAACAAGCACTATCCGGAAAAAACACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCTCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTCAAGGAGCTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAAC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9693#0 CCGCGGACGCGTGGGCGGAC--GCGTG--GGTTGTGCAGAAAAAGCCGAACCCGCACGTA 56 consensus_9693#1 ---------------CCGACAAGGGTT--ACTTGTGCAGAAAAAGCCGAACCCGCACGTA 43 consensus_9693#3 -------------GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGC--GAACCGCACGTA 45 consensus_9693#2 -----------TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTA 49 * *************** ** ** ** consensus_9693#0 GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 116 consensus_9693#1 GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 103 consensus_9693#3 GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 105 consensus_9693#2 -----AGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTAC-ACTAGTCAAAC-AACC 102 ************************** ********** *********** **** consensus_9693#0 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 175 consensus_9693#1 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 162 consensus_9693#3 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 164 consensus_9693#2 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGA 162 ***************************************************** ***** consensus_9693#0 TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 235 consensus_9693#1 TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 222 consensus_9693#3 TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 224 consensus_9693#2 TGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGG--TGCTG- 219 ******************************* * ************ * ***** consensus_9693#0 TGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 295 consensus_9693#1 TGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 282 consensus_9693#3 TGCTGTTCGGCAC-TTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 283 consensus_9693#2 TGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTT----GTGTACCGCCCGAAGG 275 ************* ********** * * ** * ** **** ********** consensus_9693#0 AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGTT-GTCGATCAGTCTGTTCGCCTCGC 352 consensus_9693#1 AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGCT-GTCGATCAGTCTGTTTGCCTCGC 339 consensus_9693#3 AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGTT-GTCGATCAGTCTGTTCGCCTCGC 340 consensus_9693#2 AACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGC 335 ****** *************** ** * **** * * ** ********** ******* consensus_9693#0 ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 408 consensus_9693#1 ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 395 consensus_9693#3 ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 396 consensus_9693#2 CTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGT-- 393 * * ** ** * * ** ** * *** ** ** * ** ** consensus_9693#0 TAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAA 468 consensus_9693#1 TAACGGGCGTAACGAC----------------GGGAGCTCTTATCGCAACATTTCCTCAA 439 consensus_9693#3 TAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAA 456 consensus_9693#2 --CCGGGATATACGTT----------------GTAAA---TAAACGGGGCGCAAACNGAA 432 **** *** * * * * ** * * ** consensus_9693#0 CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGC 528 consensus_9693#1 CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGC 499 consensus_9693#3 CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCA-ACCCCGCTCAGCCATTGC 515 consensus_9693#2 CCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAA--TTCCGC---ACCATNTC 487 * * * * * * ** *** * * **** **** * consensus_9693#0 CGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATG-CAC 587 consensus_9693#1 CGGTG-----CGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATG-CAC 553 consensus_9693#3 CGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATG-GAC 574 consensus_9693#2 NGCTA-------CAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTC 540 * * ***** ** * * * * ** * consensus_9693#0 CACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGG 647 consensus_9693#1 TACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGG 613 consensus_9693#3 CACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGG 634 consensus_9693#2 CNGAACCCCCTCCNGCCAANANCCCCGCGC-TACAAANCCAATGG-ACGGGNGAAACA-- 596 ** ** * ** * * * * ** **** * *** **** consensus_9693#0 CGACAACCG-GA-GTGCGTGTGTGAAGAAGCAAA-GTG-AACGTTTTTACATGTAAGCAA 703 consensus_9693#1 CGACAACCG-GGCGTGCGTGTGTGAAGAAGCAAAAGTG-AACGTTTTTACATGTAAGCAA 671 consensus_9693#3 CGACAACG---------------------------------------------------- 642 consensus_9693#2 CGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCA 656 ** *** consensus_9693#0 ATCTCATCATAAGAAATACACTAAAAAG-ACCAAAAAAAA 742 consensus_9693#1 ATCTCATCATAAGAAATACACTGAAAAG-ACC-------- 702 consensus_9693#3 ---------------------------------------- consensus_9693#2 GCCCCNCACCCACACCTACNCGACGACGCACC-------- 688 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||