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Anopheles gambiae
cluster # 9693 cluster # 9693       Sequences # 19       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9693#0 length = 742 sequences # 11  
consensus_9693#1 length = 702 sequences # 5  
consensus_9693#2 length = 688 sequences # 1  
consensus_9693#3 length = 642 sequences # 2  

consensusID : consensus_9693#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 742
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA-TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA-GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC-GACAACC-GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAAAGACCAAAAAAAA]

[+] EMBL BM576047             [CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGGACAACCGGGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATA                            ]
[+] EMBL BM608431             [                              ccgAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATC                               ]
[+] EMBL BM587887             [                                     ccgGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTCCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCA                                                                                                                                    ]
[+] EMBL BM610931             [                                           ccgCCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAA                       ]
[+] EMBL BX629034             [                                                            AAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAA                       ]
[+] EMBL BX614396             [                                                                                    CTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATTCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAAT                                     ]
[+] EMBL BX613345             [                                                                                                                AACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAA             ]
[+] EMBL BX627383             [                                                                                                                   CCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACNAACCTTCGTGACGAAAGGTCACATCCGC AAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTT                                                   ]
[+] EMBL AGA282387            [                                                                                                                                   GCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCNACACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAG                                                                                                                ]
[+] EMBL BX620023             [                                                                                                                                                                   ATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTA                ]
[-] EMBL AGA280764            [                                                                                                                                                                                                                                                                                                                          TCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTGTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAAAGACCAAAAAAAA]


>consensus_9693#0 CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAA AAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTT GCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGATTTGATGGTA CGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTG TTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCG TCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTC GGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAA CGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCT AGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACG CAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGT GACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACCGGAGT GCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAAT ACACTAAAAAGACCAAAAAAAA



consensusID : consensus_9693#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 702
fasta sequence
                              [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA-ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG-GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGA-CGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC]

[+] EMBL BM591951             [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTACAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGAT                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM591955             [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG GGCAGCGTGCTGCTGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM618032             [                  ccgGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGTAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCAAAGGAAAGCGTCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGA CGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC]
[+] EMBL BX621077             [                       AAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGTAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAACAAAACAAGCACTATCCGGAAAAAACACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCTCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTCAAGGAGCTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGACCGGGAACTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAAAC GGCGTGCGTGTGTGAAGAAGC AAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAG   ]
[+] EMBL BX621842             [                                                                                                                                                                           TATGTGTCNCCGGTCAATCCGGNCGTATTCCCGCACCTGNACCAGCGTGCTGCTGCTGTTCNGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAA                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_9693#1 CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTT TTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGC AGTAAAACAAGCACTATCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGC CGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCT TCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCG TCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGC TGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGACGGGAGCTCT TATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCA CACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTG AGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCA CGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTA CATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC



consensusID : consensus_9693#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence
                              [TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGGGCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCACCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTCCNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCCCNCACCCACACCTACNCGACGACGCACC]

[+] EMBL AL695483             [TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGGGCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCACCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTCCNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCCCNCACCCACACCTACNCGACGACGCACC]


>consensus_9693#2 TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTT TTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCA GTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGC CGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCA CCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACT TNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGT AGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGG GCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCA CCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTC CNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGC AANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCC CNCACCCACACCTACNCGACGACGCACC



consensusID : consensus_9693#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 642
fasta sequence
                              [GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAA-CCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA-ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCA-CTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG]

[+] EMBL AL693654             [GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAA CCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCA CTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG]
[+] EMBL AL931706             [    GCCCGAGGTTT  CTTGTGCAGAAAAAGCGAACCCGCACGTAGT AAAGTAGCTTG TTTTGTAAAATAGCTGTAATTCTACTACCACTAGTC AACCAACCCTTTGCCGGCACACCGCAACAAAACAAGCACTATCCGGAAAAAACACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCTCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTCAAGGAGCTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAAC                                                                                                                                                                                                                                                  ]


>consensus_9693#3 GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAACCGCACGTAGTAAAAGTAGCTTGT TTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACC GCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTC GCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACTTC TTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGC GTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTG CTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGT GTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTG AATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAAT GGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCAC ATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9693#0      CCGCGGACGCGTGGGCGGAC--GCGTG--GGTTGTGCAGAAAAAGCCGAACCCGCACGTA 56
consensus_9693#1      ---------------CCGACAAGGGTT--ACTTGTGCAGAAAAAGCCGAACCCGCACGTA 43
consensus_9693#3      -------------GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGC--GAACCGCACGTA 45
consensus_9693#2      -----------TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTA 49
                                       *             ***************      ** ** **

consensus_9693#0      GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 116
consensus_9693#1      GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 103
consensus_9693#3      GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 105
consensus_9693#2      -----AGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTAC-ACTAGTCAAAC-AACC 102
                           **************************  ********** *********** ****

consensus_9693#0      CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 175
consensus_9693#1      CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 162
consensus_9693#3      CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 164
consensus_9693#2      CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGA 162
                      *****************************************************  *****

consensus_9693#0      TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 235
consensus_9693#1      TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 222
consensus_9693#3      TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 224
consensus_9693#2      TGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGG--TGCTG- 219
                      *******************************    * ************  *  ***** 

consensus_9693#0      TGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 295
consensus_9693#1      TGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 282
consensus_9693#3      TGCTGTTCGGCAC-TTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 283
consensus_9693#2      TGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTT----GTGTACCGCCCGAAGG 275
                      *************  **********  * *   ** * **    **** ********** 

consensus_9693#0      AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGTT-GTCGATCAGTCTGTTCGCCTCGC 352
consensus_9693#1      AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGCT-GTCGATCAGTCTGTTTGCCTCGC 339
consensus_9693#3      AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGTT-GTCGATCAGTCTGTTCGCCTCGC 340
consensus_9693#2      AACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGC 335
                      ****** ***************  ** *  **** * * ** ********** *******

consensus_9693#0      ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 408
consensus_9693#1      ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 395
consensus_9693#3      ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 396
consensus_9693#2      CTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGT-- 393
                          * *  **  **      * *  **  **  * ***  **  **    * ** **  

consensus_9693#0      TAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAA 468
consensus_9693#1      TAACGGGCGTAACGAC----------------GGGAGCTCTTATCGCAACATTTCCTCAA 439
consensus_9693#3      TAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAA 456
consensus_9693#2      --CCGGGATATACGTT----------------GTAAA---TAAACGGGGCGCAAACNGAA 432
                         ****    ***                  *  *    * * **   *     *  **

consensus_9693#0      CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGC 528
consensus_9693#1      CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGC 499
consensus_9693#3      CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCA-ACCCCGCTCAGCCATTGC 515
consensus_9693#2      CCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAA--TTCCGC---ACCATNTC 487
                      *   * *        *  *    *      ** ***  * *    ****    ****  *

consensus_9693#0      CGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATG-CAC 587
consensus_9693#1      CGGTG-----CGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATG-CAC 553
consensus_9693#3      CGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATG-GAC 574
consensus_9693#2      NGCTA-------CAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTC 540
                       * *        *****          ** *         * *     *  **      *

consensus_9693#0      CACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGG 647
consensus_9693#1      TACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGG 613
consensus_9693#3      CACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGG 634
consensus_9693#2      CNGAACCCCCTCCNGCCAANANCCCCGCGC-TACAAANCCAATGG-ACGGGNGAAACA-- 596
                         ** **       * **    * *   *  * **  ****  * ***    ****   

consensus_9693#0      CGACAACCG-GA-GTGCGTGTGTGAAGAAGCAAA-GTG-AACGTTTTTACATGTAAGCAA 703
consensus_9693#1      CGACAACCG-GGCGTGCGTGTGTGAAGAAGCAAAAGTG-AACGTTTTTACATGTAAGCAA 671
consensus_9693#3      CGACAACG---------------------------------------------------- 642
consensus_9693#2      CGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCA 656
                      ** ***                                                      

consensus_9693#0      ATCTCATCATAAGAAATACACTAAAAAG-ACCAAAAAAAA 742
consensus_9693#1      ATCTCATCATAAGAAATACACTGAAAAG-ACC-------- 702
consensus_9693#3      ----------------------------------------
consensus_9693#2      GCCCCNCACCCACACCTACNCGACGACGCACC-------- 688
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)