These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9695#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1246 fasta sequence [GAATCGGCACGAGGTGCGCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGAC--GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT-AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA-CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG--CGATTTCGGAACGGTTTAACG-CAGAAGTT-GGTGCACT-A--A--TTATTGCAACAAAATGGAC-TTTGTGA-AAGACTTT-TGTTACTACTTC-GGCG-TCATA-GCA-TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGG-TGCCCTACGTGACGCGAGACTTTTGGA-GTGCTCTG--CCACCGAAA-CGGATCGAAC-ACTTCGCCGGTCCCATCCCGTACGTC-A-TCA-TACATCATTCGTA-CCGGCCGG-CGGC--ATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCA-GAAGATGCACCAGGACGAGCGCCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCACGTGTACCA-GGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTT-GGGATCTGTCTGATCGGTGATTGGGTTGCGGA-TTTGCCACCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTACACCTTGCTGGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGCTGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTCGATCAGAAAAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACTCTTAAATAGCTTATTAACGTGCGCTACCTCTCCTTTGCATACGGTAACCATCATGTTCCTAAAGTGTGTGTTTTTTGTAATAAAACCATTCAANACCTTAAAAAAAA] [+] EMBL BX468708 [GAATCGGCACGAGGTGCGCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAAGCAAATTCCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTCGGAACGGTTTAACG CAGAAGTTAGGTGCACT ANNACTTTATTGCAACAAAATGGACTTTTGTGANAAGACTTTCTGTTACTACTTCGGGCGNTCATAGGCAGTTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTTGCCCTACGTGACGCGAGACTTTTGGAGGTGCTCTGANCCACCGAAACCGGATCGAACGACTTCGCCGGTCCCATCCCGTACGTCGAGTCAGTACATCATTCGNACCCGGACGGACGGCAGATGCTACA ] [+] EMBL BX624175 [ CGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGAC GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGANGAGAAAGATTGTC ] [+] EMBL BX604660 [ ATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGAC GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTAAGAACGGTTTAACG CAGAAGTT GGTGCACT A A TTGTTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTT ] [+] EMBL CNS09OVM [ CGCCAT CCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATTCCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTCGGAACGGTTTAACG CAGAAGTT AGTGCACTAA A TTATTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGG TGCCCTACGTGACGCGAGACTTTTGGA GTGCTCTG CCACCGAAA CGGATCGAAC ACTTCGCCGGTCCCATCCCGTACGTC A TCA TACATCATTCGTA CCGGCCGG CGGC ATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCA GAAGATGCACCAGGACGAGCGCCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCACGTGTACCA GGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTTGGGGATCTGTCTGATCGGTGATTGGGTTGCGGA TTTGCCACCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAAC ] [+] EMBL AGA282423 [ ACGCTATCAACAATCGCGAC GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTAAGAACGGTTTAACG CAGAAGTT GGTGCACT A A TTGTTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGC ] [+] EMBL BX615009 [ TGAGGAGAAAGATTGTCCAAGAAG CGATTTAAGAACGGTTTAACG CAGAAGTG GGTGCACT A A TTGTTGCAACAAAATGGAC TTTGTGA AAGACTTG GGTTACTACTTC GGCG TCATA GCA TTTACCCTATCATACGTTGCGGTTGATAGTAAAGCAGGTGACCCGG TGCCCTACGTGACGCGAGACTCCTGGA GTGCTCTG CCACCGAAA CAGATCG ] [+] EMBL AL697052 [ agcAGATCG CCACGAGGTNCAATTTCGGAACGGTTTAACGCCAGAAGTT AGTGCACTAA A TTATTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGG TGCCCTACGTGACGCGAGACTTTTGGA GTGCTCTG CACCGAAA CGGATCGAAC ACTTCGCCGGTCCCATCCCGTACGTC A TCA TACATCATTCGTA CCGGCCGG CGGC ATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCACGAAGATGCACCAGGACGAGCGCCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCACGTGTACCAGGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTT GGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTTGCCACCGAAGAA ] [-] EMBL CNS09OVN [ CTTTGCGGTCGGTGGCGACGGGCACGTGTACCA GGGCCGGGGATTCAATGTGATTGG GCTCATGCGCCCCGATACAACAACCGCAGCGTT GGGATCTGTCTGATCGGTGATTGGGTTGCGGA TTTGCCACCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTACACCTTGCTGGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGCTGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTCGATCAGAAAAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACTCTTAAATAGCTTATTAACGTGCGCTACC ] [-] EMBL AGA280799 [ ATGGTGTCCGGAATGGGCTGATTGCACAGAACTACACCTTGCTCGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGCTGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTTGATCAGAACAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACTCTT AATAGCTTATTAACGTGCGCTACCTCTCCTTTGCATACGGTAACCATCATGTTCCTAAAGTGTGTGTTTTTTGTAATAAAACCATTCAANACCTTAAAAAAAA] consensusID : consensus_9695#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 833 fasta sequence [TTGCCCCAGGTTTACTGCG-CGGAG-CATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGAC-TTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGA-CCCGGTGCCCTACGTGACGCGAGAC-TTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCAT-CCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGGAAGATGCACCCAGGGANCGTGCGTCAGTGGAACGACAATCGGGTACAGCTTTGCGGTCGGTGGCAGACGGGCCGCGTTGTACCAGGGGCCGGGGGATTCAACT] [+] EMBL AL693600 [TTGCCCCAGGTTTACTGCG CGGAG CATCCGCGAT ATAAGTGCGCGTACTTGAGTGCGTA CACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAA ACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAATANAGATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCCGGTGCCCTACGTGACGCGAGACTTTTTGGAGTGCTCTGGCACCGAAACAGATCGAACACTTCGCCGGTCCCAT CCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGGAAGATGCACCCAGGGANCGTGCGTCAGTGGAACGACAATCGGGTACAGCTTTGCGGTCGGTGGCAGACGGGCCGCGTTGTACCAGGGGCCGGGGGATTCAACT] [+] EMBL BM588668 [ ccgGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAAGAAATATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGAC TTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGA CCCGGTGCCCTACGTGACGCGAGAC TTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCAT CCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCAT ] [+] EMBL BM584769 [ ccgCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGAC TTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGA CCCGGTGCCCTACGTGACGCGAGAC TTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCA ] consensusID : consensus_9695#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 771 fasta sequence [GCCCCGAGGTTANAGTGCGTACACCGACCAGTTGTGCGCCATCCCGTNCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGACGACCACGCGCGACACTGCTCTACTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACNGCACCAACGCACACAACACCGTACAACAAATACCTCGACGAAAATACTGCTTATACAAAAGAACTCCAGTGGCGGTGCAGGAGANAAGATTGTCCAAGAAGCGATTTAAGCAACGGTTTAACGCAGNAGTNGGTGCACTAATTGTTGCAACAAAATGGACTTTGTGAAACGACTTTNGTTACTACTTCGGCGTCATAGCTTTTACCCTATTTTACGTTGCGGTTGATACGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGGACTTATNGGCACGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGGCGGCGGTCATGCTACAACGGGTCTGNCGTGCNATCTGTCGGCAAATGCAATCGAATGCAGAAAGATTGCACCACGACGGTGCGTCAAGTGGAANCGACATCGGGTAACAGATATTGACNGNNCGGTAGGACGA] [+] EMBL AL692489 [GCCCCGAGGTTANAGTGCGTACACCGACCAGTTGTGCGCCATCCCGTNCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGACGACCACGCGCGACACTGCTCTACTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACNGCACCAACGCACACAACACCGTACAACAAATACCTCGACGAAAATACTGCTTATACAAAAGAACTCCAGTGGCGGTGCAGGAGANAAGATTGTCCAAGAAGCGATTTAAGCAACGGTTTAACGCAGNAGTNGGTGCACTAATTGTTGCAACAAAATGGACTTTGTGAAACGACTTTNGTTACTACTTCGGCGTCATAGCTTTTACCCTATTTTACGTTGCGGTTGATACGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGGACTTATNGGCACGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGGCGGCGGTCATGCTACAACGGGTCTGNCGTGCNATCTGTCGGCAAATGCAATCGAATGCAGAAAGATTGCACCACGACGGTGCGTCAAGTGGAANCGACATCGGGTAACAGATATTGACNGNNCGGTAGGACGA] consensusID : consensus_9695#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 720 fasta sequence [CCGCCCACGCGTCCGTTTCAACCTGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA---GCTCACGAAATTAC-TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTA-TTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGT-CCCATCCCGTACGTCATCATACATCATTCGTACAGGGCCGGCGGCATGCTACAACGGGC] [+] EMBL BM608067 [CCGCCCACGCGTCCGTTTCAACCTGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA GCTCACGAAATTAC TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTA TTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGT CCCATCCCGTACGTCATCATACATCATTCGTACA GGCCGGCGGCA ] [+] EMBL BX603206 [ TGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCA ] [+] EMBL BM582137 [ ccgCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTCCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA GCTCACGAAATTAC TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTA TTTTACGTTGCGGGTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGT CCCATCCCGTACGTCATCATACATCATTCGTACAGGGCGGGCGGCATGCTACAACGGGC] [+] EMBL BM598242 [ ccgGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA GCTCACGAAATTAC TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCCATCCCGTACGTCATCATACATCATTCGTACAGGGCCGGCGGCATGCTA ] [+] EMBL BM590045 [ ccgCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATATACTCTCACAAAATTACGTGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGG ] consensusID : consensus_9695#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence [CCGCCCACGCGTCCGGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGAAGATGCACCAGGACGTGCGTCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCGCGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCCCCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTAC] [+] EMBL BM579608 [CCGCCCACGCGTCCGGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGAAGATGCACCAGGACGTGCGTCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCGCGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCCCCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9695#1 ------TTGCCCCAGGTTTA--CTGCGC-GGAGC-ATCCGCGATAATAAGTGCGCGTACT 50 consensus_9695#3 CCGCCCACGCGTCCGTTTCAACCTGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACT 60 consensus_9695#2 -------------------------------------------------GCCCCGAGGTT 11 consensus_9695#0 ---------GAATCGGCACGAGGTGCGC-GGAGCCATCCGCGATAATAAGTGCGCGTACT 50 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 TGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTC 110 consensus_9695#3 TGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTC 120 consensus_9695#2 ANAGTGCGTAC-ACCGACCAGTTGTGCGCCATCCCGTNCCGAACAAAAACAATACGTTTC 70 consensus_9695#0 TGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTC 110 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 GCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCT-CTGTACGC 169 consensus_9695#3 GCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCT-CTGTACGC 179 consensus_9695#2 GCGTTTCCACGCTATCAACAATCGCGACGA--CCACGCGCGACACTGCTCTACTGTACGC 128 consensus_9695#0 GCGTTTCCACGCTATCAACAATCGCGACGA--CCACGCGCGACACTGCTCT-CTGTACGC 167 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 AAATAATTCGATCGAGTGGG--------------TTCGTTGTCAAGCTCACGCGCAGGCT 215 consensus_9695#3 AAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCT 239 consensus_9695#2 AAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCT 188 consensus_9695#0 AAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCT 227 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 275 consensus_9695#3 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 299 consensus_9695#2 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 248 consensus_9695#0 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 287 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 TATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACG-CACCAACGCACACAACACTGT 334 consensus_9695#3 TATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACG-CACCAACGCACACAACACCGT 358 consensus_9695#2 TATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACNGCACCAACGCACACAACACCGT 308 consensus_9695#0 TATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACG-CACCAACGCACACAACACCGT 346 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 ACAACAAATAGCTC-ACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGT 393 consensus_9695#3 ACAACAAATAGCTC-ACGAAATTACTGCTTTACCAGTCAAAA---CTGTACCTCCAGTGT 414 consensus_9695#2 ACAACAAATACCTCGACGAAAATACTGCTT----ATACAAAA------GAACTCCAGTG- 357 consensus_9695#0 ACAACAAATACCTC-ACGAAAATACTGCTT-----ATAAAAA-------AACTCCAGTG- 392 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 GTGTGTGTGT--CTGTGTGAAGAAAGATTGTCCAAAAAGCGATTTAAG-AACGGTTTAAC 450 consensus_9695#3 GTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAG-AACAGTTTAAC 473 consensus_9695#2 ------GCGG---TGCAGGAGANAAGATTGTCCAAGAAGCGATTTAAGCAACGGTTTAAC 408 consensus_9695#0 ------GCG-----GTGAGGAGAAAGATTGTCCAAGAAGCGATTTCGG-AACGGTTTAAC 440 consensus_9695#4 --------------CCGCCCACGCGTCCGGCCCAAGAAGCGATTTAAG-AACAGTTTAAC 45 * **** ********* * *** ******* consensus_9695#1 GCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 509 consensus_9695#3 GCAGAAGTTGGTGCAGTAA-TTGTTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 531 consensus_9695#2 GCAGNAGTNGGTGCACTAA-TTGTTGCAACAAAATGGACTTTGTGAAACGACTTTNGTTA 467 consensus_9695#0 GCAGAAGTTGGTGCACTAA-TTATTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 498 consensus_9695#4 GCAGAAGTTGGTGCAGTAA-TTGTTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 103 **** *** ***** *** ** ************************* ****** **** consensus_9695#1 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 568 consensus_9695#3 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 590 consensus_9695#2 CTACTTCGGCGTCATAGCTTTTACCCTATTTTACGTTGCGGTTGATACGTAAAGCATGTG 527 consensus_9695#0 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 557 consensus_9695#4 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 162 ****************** **************************** ************ consensus_9695#1 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACAGATC 624 consensus_9695#3 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACAGATC 646 consensus_9695#2 ACCCGGTGCCCTACGTGACGCGAGGACTTATNGGCACGTGCTCTGCCACCGAAACAGATC 587 consensus_9695#0 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACGGATC 613 consensus_9695#4 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACAGATC 218 ************************ **** * * ****************** **** consensus_9695#1 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGG-CCGGCGG- 682 consensus_9695#3 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGGGCCGGCGG- 705 consensus_9695#2 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGG--CGGCGGT 645 consensus_9695#0 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGG-CCGGCGG- 671 consensus_9695#4 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGG-CCGGCGG- 276 ************************************************ ** ****** consensus_9695#1 CATGCTACAACGGG-CTGCAGTGCATCGCGGC----AATGCAATCGATGCAGGAAGATGC 737 consensus_9695#3 CATGCTACAACGGG-C-------------------------------------------- 720 consensus_9695#2 CATGCTACAACGGGTCTGNCGTGCNATCTGTCGGCAAATGCAATCGAATGCAGAAAGATT 705 consensus_9695#0 CATGCTACAACGGG-CTGCAGTGCATCGCGGC----AATGCAATCGATGCAGAAGA---T 723 consensus_9695#4 CATGCTACAACGGG-CTGCAGTGCATCGCGGC----AATGCAATCGATGCAGAAGA---T 328 ************** * consensus_9695#1 ACCCAGGGANCGTGCGTCAGT--GGAACGACAATCGGGTACAGCTTTGCGGTCGGTGGCA 795 consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 GCACCACGACGGTGCGTCAAGTGGAANCGACATCGGGTAACAGATATTGACNGNNCGGTA 765 consensus_9695#0 GCACCAGGACGA-GCGCCAGT--GGAACGACATCGGGT-ACAGCTTTGCGGTCGGTGGCG 779 consensus_9695#4 GCACCAGGAC-GTGCGTCAGT--GGAACGACATCGGGT-ACAGCTTTGCGGTCGGTGGCG 384 consensus_9695#1 GACGGGCCGCGTTGTACCAGGGGCCGGGGGATTCAACT---------------------- 833 consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 GGACGA------------------------------------------------------ 771 consensus_9695#0 ACGGGCACGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACA 839 consensus_9695#4 ACGGGCGCGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACA 444 consensus_9695#1 ------------------------------------------------------------ consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 ------------------------------------------------------------ consensus_9695#0 ACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCACCGAAGA 899 consensus_9695#4 ACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCCCCGAAGA 504 consensus_9695#1 ------------------------------------------------------------ consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 ------------------------------------------------------------ consensus_9695#0 ACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCAC 959 consensus_9695#4 ACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCAC 564 consensus_9695#1 ------------------------------------------------------------ consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 ------------------------------------------------------------ consensus_9695#0 AGAACTACACCTTGCTGGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGC 1019 consensus_9695#4 AGAACTAC---------------------------------------------------- 572 consensus_9695#1 ------------------------------------------------------------ consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 ------------------------------------------------------------ consensus_9695#0 TGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTCGATCAGA 1079 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 ------------------------------------------------------------ consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 ------------------------------------------------------------ consensus_9695#0 AAAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACT 1139 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 ------------------------------------------------------------ consensus_9695#3 ------------------------------------------------------------ consensus_9695#2 ------------------------------------------------------------ consensus_9695#0 CTTAAATAGCTTATTAACGTGCGCTACCTCTCCTTTGCATACGGTAACCATCATGTTCCT 1199 consensus_9695#4 ------------------------------------------------------------ consensus_9695#1 ----------------------------------------------- consensus_9695#3 ----------------------------------------------- consensus_9695#2 ----------------------------------------------- consensus_9695#0 AAAGTGTGTGTTTTTTGTAATAAAACCATTCAANACCTTAAAAAAAA 1246 consensus_9695#4 ----------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||