These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9698#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1329 fasta sequence [CATAAAGCGCATGAAAATGATTAACGCGTTTATTACATTCTACGTTCCTTCCTACATCCAAGTTGCATATGGATTACGACTCCGAACGACACGAACAAAGAACTTGTACGATTACCGTGGGTTTTTCTCGGTCACCCGATGTTTAAGTATCAGAGTGCGATTGGCAATGCATATCACATGTTAACATCCGAAATTTGAGTGGTTGTTTAATTTAACGCAGAACTTCCTACTACAACGGACTACCTCAATGATTTAGGCTTTGAATAATATCCGAAATTTTAGTGGTTGTTTGAG-GGAATTAGAATAGAGGGGTGCC-ACTTTCGCCGCACA-GCTTGCATGA-TGGAGCTGACGCTGTATAGCCGCATCGCATCCACAATGGCACTGATGCTATAGTGACATACCTAATCCACAATGGCGTTAATGCAATTACTGGTCACTATCCGCTAAGGGGCTGATGCTGTATCAGTTTACCTTATTCACAATGGTGCAAGGTTTTATACTAGATGTTACATCCGAAATTTTAGTGGTTGTTTAAAAGATCTTTTC-A-GCCTGAACGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGCTGCTGAGACTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACTGCATCTCTTTCGCTCTCCCGATTGCGATCCACT-CCTATGTGGAAATCGCGATGACTTATATCCACACA---CACACACACTGATGCGCATGTATGAATATGAAGTGCTGTGGTGTTGGTGAAGTCGTTAACCATGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATTAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGACGGCCGCT--AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC-TTTGCCGCGCACGTTTATCACCAGACGGC-AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA-CGCTACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCCGGGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGTACGCACCAACCGCTCTGCTTCAC-CGGCC-CGG] [+] EMBL CNS08NK4 [CATAAAGCGCATGAAAATGATTAACGCGTTTATTACATTCTACGTTCCTTCCTACATCCAAGTTGCATATGGATTACGACTCCGAACGACACGAACAAAGAACTTGTACGATTACCGTGGGTTTTTCTCGGTCACCCGATGTTTAAGTATCAGAGTGCGATTGGCAATGCATATCACATGTTAACATCCGAAATTTGAGTGGTTGTTTAATTTAACGCAGAACTTCCTACTACAACGGACTACCTCAATGATTTAGGCTTTGAATAATATCCGAAATTTTAGTGGTTGTTTGAG GGAATTAGAATAGAGGGGTGCC ACTTTCGCCGCACA GCTTGCATGA TGGAGCTGACGCTGTATAGCCGCATCGCATCCACAATGGCACTGATGCTATAGTGACATACCTAATCCACAATGGCGTTAATGCAATTACTGGTCACTATCCGCTAAGGGGCTGATGCTGTATCAGTTTACCTTATTCACAATGGTGCAAGGTTTTATACTAGATGTTACATCCGAAATTTTAGTGGTTGTTTAAAAGATCTTTTC A GCCTGAACGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGCTGCTGAGACTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACTGCATCTCTTTCGCTCTCCCGATTGCGATCCACT CCTATGTGGAAATCGCGATGACTTATATCCACACA CACACACACTGATGCGCATGTATGAATATGAAGTGCCGTGGTGTTGGTGAAGTCGTTAACC TGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACT AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAA ] [+] EMBL CNS08MCG [ AGCGCATGAAAATGATTAACGCGTTTATTACATTCTACGTTCCTTCCTACATCCAAATTACATTTGGATTACGA TCCCAACTACACGAACAAAGAACTTGTACGATTACCGTGGGTTTTTCTCGGTTACCCGATGTTTAAGTATCAGAGTGCGATTGGCAATGCATATCACATGTTAACATCCGAAATTTGAGTGGTTGTTTAATTTAACACGAAACTTCCTACTACAACGGACTACCTCAATGATTTAGGCTTTGAATAATATCCGAAATTTTAGTGGTTGTTTGAGCGGAATTAGAATAGAGGGGTGCC ACTTTCGCCGCACATGCTTGCATGA TGGAGCTGACGCTGTATAGC ] [+] EMBL CNS08M4U [ ATTAAAATGATTAACGCGTTTATTACATTCTACGTTCCTTCCTACATCCAAGTTGCATATGGATTACGACTCCGAACGACACGAACAAAGAACTTGTACGATTACCGTGGGTTTTTCTCGGTCACCCGATGTTTAAGTATCAGAGTGCGATTGGCAATGCATATCACATGTTAACATCCGAAATTTGAGTGGTTGTTTAATTTAACGCAGAACTTCCTACTACAACGGACTACCTCAATGATTTAGGCTTTGAATAATATCCGAAATTTTAGTGGTTGTTTGAG GGAATTAGAATAGAGGGGTGCC ACTTTCGCCGCACA GCTTGCATGA TGGAGCTGACGCTGTATAGCCGCATCGCATCCACAATGGCACTGATGCTATAGTGACATACCTAATCCACAATGGCGTTAATGCAATTACTGGTCACTATCCGCTAAGGGGCTGATGCTGTATCAGTTTACCTTATTCACAATGGTGCAAGGTTTTATACTAGTTTTTACATCCGAAATTTTAGTGGTTGTTTAAAAGATCTTTTCGACGCCTGAACGT ] [-] EMBL BX609269 [ ACAAAGAACTTGTACGATTACCGTGGGTTTTTCTCGGTCACCCGATGTTTAAGTATCAGAGTGCGATTGGCAATGCATATCACATGTTAACATCCGAAATTTGAGTGGTTGTTTAATTTAACGCAGAACTTCCTACTACAACGGACTACCTCAATGATTTAGGCTTTGAATAATATCCGAAATTTTAGTGGTTGTTTGAG GGAATTAGAATAGAGGGGTGCC ACTTTCGCCGCACA GCTTGCATGA TGGAGCTGACGCTGTATAGCCGCATCGCATCCACAATGGCACTGATGCTATAGTGACATACCTAATCCACAATGGCGTTAATGCAATTACTGGTCACTATCCGCTAAGGGGCTGATGCTGTATCAGTTTACCTTATTCACAATGGTGCAAGGTTTTATACTAGATGTTACATCCGAAATTTTAGTGGTTGTTTAAAAGATCTTTTC A GCCTGAACGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGCTGCTGAGACTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACTGCATCTCTTTCGCTCTCCCGATTGCGATCCACT CCTATGTGGAAATCGCGATGACTTATATCCACACA CACACACACTGATGCGC ] [-] EMBL CNS08NK3 [ GGGTGCCAACTTTCGCCGCACA GCTTGCATGATTGGAG TGACGCTGTATAGCCGCATCGCATCCACAATGGCACTGATGCTATAGTGACATACCTAATCCACAATGGCGTTAATGCAATTACTGGTCACTATCCGCTAAGGGGCTGATGCTGTATCAGTTTACCTTATTCACAATGGTGCAAGGTTTTATACTAGATGTTACATCCGAAATTTTAGTGGTTGTTTAAAAGATCTTTTC A GCCTGAACGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGCTGCTGAGACTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACTGCATCTCTTTCGCTCTCCCGATTGCGATCCACT CCTATGTGGAAATCGCGATGACTTATATCCACACA CACACACACTGATGCGCATGTATGAATATGAAGTGCCGTGGTGTTGGTGAAGTCGTTAACC TGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACT AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTACCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CG TACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACCCCCGGGCGCCCGC ] [+] EMBL CNS08OAV [ gCTTTCCATGCCATCGGCCTGAAGAAAAAAGAGCTGCTGAGACTTAATGCTGAAAAAGCCGAATAGTCGGTCTTTTACTGCATCTCTTTCGCTCTCCCGATTGCGATTTACT CCTATGTGAAAATCGCGATGATTTATA CC CA CACACACACTGATGCGCATGTATGAATATAAAGTGCTGCGGTGTTGGTGAAGTCGTTAACCATGGTCTTCACACCGCGTACCGGCGTTTCTCCGCCGCCAG ] [-] EMBL BM594351 [ CTTTTACTGCATCTCTTTCGCTCTCCCGATTGCGATCCACTCCCAATGTGGAAATCGCGATGATTTATACCCACACACACCACACACACTGATGCGCATGTATGAATATTAAGTGCTGTGGTGTTGGTGAAGTCGTTAACCATGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACCGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATTAGGCGACGCGATGGGTCGTTTCTTTAAGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGACGGCCGCT AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCC GGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGTACGCACCAACCGCTCTGCTTCAC CGG ] [-] EMBL BM593990 [ CCGATTGCGATCCACT CCAATGTGGAAATCGCGATGATTTATACCCACACA CACACACACTGATGCGCATGTATGAATATAAAGTGCTGTGGTGTTGGTGAAGTCGTTAACCATGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACCGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATTAGGCGACGCGATGGGTCGTTTCCTTAAGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCGAAGACTGACAGCCGCTAAAATTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACCGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCC GGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGTACGCACCAACCGCTCTGCTTCAC ACACC CGG] [-] EMBL BM579544 [ GCGATCCACT CCTATGTGGAAATCGCGATGACTTATA CC CA CACACACACTGATGCGCACGTATGAATATGAAGTGCTGTGGTGTTGGTGAAGTCGTTAACCATGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAACACCGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATAGGGAATTATGCGACGCGATGGATCGTTTCCTTCCGGTGGTCCATGCTGA ACGCCAATGAGAACGGTCATCATTTTCTAATCGAAGACTGACGGCCGCT AGTTCCGTGCTGGTCAAAACGGTTCGGACACACGCACTGATTTTCTAACCTTGCAGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTTTCACCAGACGGC AGCCATTTTGTTACAACAACCGTGCCGTTGACCGCATCCGAGGGCCAACTAAACTGCGATGCCGGTTTGCCACACGCCAGCCA AGCTACGCACAGCTGCCACTACTGCGGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCCGGGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGCACGTACCAACCGCTCTGTTTCAC CGG ] [-] EMBL BM614382 [ CGCGATGACTTATATCCACACA CACACACACTGATGCGCATGTATGAATATGAAGTGCCGTGGTGTTGGTGAAGTCGTTAACC TGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACT AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTACCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACCCCCGGGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGTACGCACCAACCGCTCTGCgg ] [-] EMBL BX611220 [ TGTTGGTGAAGTCGTTAACC TGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACT AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTACCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACTG ] [-] EMBL BM605840 [ AGTCGTTAACCATGGTCTTCACACCGCGTACCGGCGTGTCTCCGCCGCCAGCTTCTAATACCGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATTAGGCGACGCGATGGGTCGTTTCCTTAAGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCGAAGACTGACAGCCGCTAAAATTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACCGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCC GGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGTACGCACCAACCGCTCTGC CCACGCGTCCGCGG] [-] EMBL BM630618 [ CACGCGGTTGCGACGCACGTTGATGGGGAATTAGGCGACGCGATGGGTCGTTTCTTTAAGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGACGGCCGCT AGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCC GGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGTACGCACCAACCGCTCTGCTTCAC ACACC CGG] [-] EMBL BM597558 [ cgAAGACTGACGGCCGCT AGTTCCGTGCTGGTCAAAACGGTTCGGACACACGCACTGATTTTCTAACCTTGCAGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTTTCACCAGACGGC AGCCATTTTGTTACAACAACCGTGCCGTTGACCGCATCCGAGGGCCAACTAAACTGCGATGCCGGTTTGCCACACGCCAGCCA AGCTACGCACAGCTGCCACTACTGCGGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCCGGGCGCCCGCGCGGCAATGCTCGCAGAAACTCACGCACGTACCAACCGCTCTGTTTCAC CGG ] [-] EMBL CNS08MCF [ AGGCCGACATGACGCCATCCACGGAAATAACGCCAACGCATTTGCCGCGCACGTTTATCACCAGACGGCAAGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCAGCG TACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCCGGGAGCCCGCGCGGCAATGCTCGCAGACACTCACGCACGCACCAAGCGCTCTctc ] [-] EMBL CNS08OAU [ ATCCACGGAAATAACGCCAACGC TTTGCCGCGCACGTTTATCACCAGACGGC AGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA C CTACGCACAG TGCCGCTACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACACCCGGGAGCCCGCGCGGCAATGCTCGCAGATACTCACGCACGCACCAAGCGCTCTGCTTCACacacggg ] consensusID : consensus_9698#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 743 fasta sequence [CGCACTCCGCATGTCCCACCTANTGGGCACTTGATTGCTAATACGNTGACAAGTACGTTAAANTCCAAGCAACTGGCCGTTAAATGCANACTTACCTGGGTCCACCTACTCCCGTNTAAACTGGGCTCTGANTNGCTTGTATTCAAGTTTACCCGTTAGTTCGANCAATGGTGNAAGGTTTTATACGTAGATGTTACATTCGCGAAACTTTTAGTGGTTTGCTTTAAAAGATCTTTTCAGCCTGAACTGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGGCTGGCTGAGACTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACCTGCATCTCTTTCGCTCTCCCGATTGCGATCCACTCCTACTCGTGGAAATCGCGATCGACTTATATCCACACACACACACACTGATGCGCATGTATGAATATGAAGTGCCGTGCTGCTTGGTGAAGTCGTTAACCTGGTCTTCACACCGCGTACCCGGCGTGTCCTCCGCCGCCAGCTTCTAATACCAGGGAACATGANCCGCTTCAGCACCGAGCAGAGAGCAAGCCACGGCGGTTGGACGGCACGTTGGATGGGGAAGTAAGGCGAGCGCGATGGGNCGTTTCCGTTACCGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACTAGTTCCATGCTGGTAAAGCCGTTCGACACACGCACTAATTCCCTCGNCCGATCTGC] [-] EMBL BX466316 [CGCACTCCGCATGTCCCACCTANTGGGCACTTGATTGCTAATACGNTGACAAGTACGTTAAANTCCAAGCAACTGGCCGTTAAATGCANACTTACCTGGGTCCACCTACTCCCGTNTAAACTGGGCTCTGANTNGCTTGTATTCAAGTTTACCCGTTAGTTCGANCAATGGTGNAAGGTTTTATACGTAGATGTTACATTCGCGAAACTTTTAGTGGTTTGCTTTAAAAGATCTTTTCAGCCTGAACTGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGGCTGGCTGAGACTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACCTGCATCTCTTTCGCTCTCCCGATTGCGATCCACTCCTACTCGTGGAAATCGCGATCGACTTATATCCACACACACACACACTGATGCGCATGTATGAATATGAAGTGCCGTGCTGCTTGGTGAAGTCGTTAACCTGGTCTTCACACCGCGTACCCGGCGTGTCCTCCGCCGCCAGCTTCTAATACCAGGGAACATGANCCGCTTCAGCACCGAGCAGAGAGCAAGCCACGGCGGTTGGACGGCACGTTGGATGGGGAAGTAAGGCGAGCGCGATGGGNCGTTTCCGTTACCGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACTAGTTCCATGCTGGTAAAGCCGTTCGACACACGCACTAATTCCCTCGNCCGATCTGC] consensusID : consensus_9698#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 682 fasta sequence [AATTCCCGGATNTGAACCTTAATATCCAACACAACACAACCACACCTGAAGGCCGCCATGGTATGGAATACTGAAAGTTCCCCGTGGTTTTGGTGAAGTCGTTTANCCCTGGTTCCTTTCACACCGGCGTACCCNGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACTAGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGCTTTACCGCGCACGTTTATCACCAGACGGCAGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA-CGCTACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACCCCCGGGCGCCCGCGCGGCAATGCTCGCAGAAAGCTCACGTACGCACCAACCGCCCATACGTGCCGATTCTGCT] [-] EMBL BX467551 [AATTCCCGGATNTGAACCTTAATATCCAACACAACACAACCACACCTGAAGGCCGCCATGGTATGGAATACTGAAAGTTCCCCGTGGTTTTGGTGAAGTCGTTTANCCCTGGTTCCTTTCACACCGGCGTACCCNGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATGAGCCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACTAGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGCTTTACCGCGCACGTTTATCACCAGACGGCAGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCA CGCTACGCACAGCTGCCGCCACTGCAGTAGCAACGCCCTTCCAGCAACAACCGGGGGTGCTACCGGGAGACACCCCCGGGCGCCCGCGCGGCAATGCTCGCAGAAAGCTCACGTACGCACCAACCGCCCATACGTGCCGATTCTGCT] [-] EMBL CNS08M4T [ ccGCTTCTATTACCGGGAACATGAACCGCTTCAGCACGAGCAGAGACAAGCCACGCGGTTGCGACGCACGTTGATGGGGAATAAGGCGACGCGATGGGTCGTTT CTTACGGTGGTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACTAGTTCCATGCTGGTTAAACCGGTTCGGACACACGCACTGATTTTCTAACCTTGCGGCAGGCCGACATGACGCCATCCACGGAAATAACGCCAACGCTTTACCGCGCACGTTTATCACCAGACGGCAGCCATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCCGGTTTGCCACACGCCAGCCATCG TACGCACAGC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9698#0 CATAAAGCGCATGAAAATGATTAACGCGTTTATTACATTCTACGTTCCTTCCTACATCCA 60 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 AGTTGCATATGGATTACGACTCCGAACGACACGAACAAAGAACTTGTACGATTACCGTGG 120 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 GTTTTTCTCGGTCACCCGATGTTTAAGTATCAGAGTGCGATTGGCAATGCATATCACATG 180 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 TTAACATCCGAAATTTGAGTGGTTGTTTAATTTAACGCAGAACTTCCTACTACAACGGAC 240 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 TACCTCAATGATTTAGGCTTTGAATAATATCCGAAATTTTAGTGGTTGTTTGAGGGAATT 300 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 AGAATAGAGGGGTGCCACTTTCGCCGCACAGCTTGCATGATGGAGCTGACGCTGTATAGC 360 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 CGCATCGCATCCACAATGGCACTGATGCTATAGTGACATACCTAATCCACAATGGCGTTA 420 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 ATGCAATTACTGGTCACTATCCGCTAAGGGGCTGATGCTGTATCAGTTTACCTTATTCAC 480 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 AATGGTGCAAGGTTTTATACTAGATGTTACATCCGAAATTTTAGTGGTTGTTTAAAAGAT 540 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 CTTTTCAGCCTGAACGTCTTTCCATGCGATCGGTCTGAAGAAAGAAGAGCTGCTGAGACT 600 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 ------------------------------------------------------------ consensus_9698#0 TAGTGCTGAAAAAGCCGAATAGTCGGTCTTTTACTGCATCTCTTTCGCTCTCCCGATTGC 660 consensus_9698#2 ------------------------------------------------------------ consensus_9698#1 -------------------------CGCACTCCGCATGTCCCACCTANTGGGCACTTGAT 35 consensus_9698#0 GATCCACTCCTATGTGGAAATCGCGATGACTTATATCCACACACACACACACTGATGCG- 719 consensus_9698#2 ----AATTCCCGGATNTGAACCTTAATATCCAACA-CAACACAACCACACCTGAAGGCCG 55 consensus_9698#1 TGCTAATACGNTGACAAGTACGTTAAANTCCAAG--CAACTGGCCGTTAAATGCANACTT 93 * * * * * * * ** * * * consensus_9698#0 -CATG-TATG-AATATGAAGTGCT----GTGGTGTTGGTGAAGTCGTT-AACCATGGTC- 770 consensus_9698#2 CCATGGTATGGAATACTGAAAGTTCCCCGTGGTTTTGGTGAAGTCGTTTANCCCTGGTTC 115 consensus_9698#1 ACCTGGGTCCACCTACTCCCGTNTAAACTGGGCTCTGANTNGCTTGT--ATTCAAGTTTA 151 * ** ** * ** ** * ** * * * * consensus_9698#0 --T-TCACACCG-CGTACC--GGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATG 824 consensus_9698#2 CTT-TCACACCGGCGTACCCNGGCGTGTCTCCGCCGCCAGCTTCTAATACAGGGAACATG 174 consensus_9698#1 CCCGTTAGTTCGANCAATGGTGNAAGGTTTTATACGTAGATGTTACATTCGCGAAACTTT 211 * * ** * * ** * ** * ** * * *** * consensus_9698#0 AGCCGCTTCAGCACGAGCAGAGA----CAAGCCACGCGGTTGCGACGCACG-TTGATGGG 879 consensus_9698#2 AGCCGCTTCAGCACGAGCAGAGA----CAAGCCACGCGGTTGCGACGCACG-TTGATGGG 229 consensus_9698#1 TAGTGGTTT-GCTTTAAAAGATCTTTTCAGCCTGAACTGTCTTTCCATGCGATCGGTCTG 270 * ** ** * *** ** * * ** * ** * * * * consensus_9698#0 GAATTAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAG 939 consensus_9698#2 GAATAAGGCGACGCGATGGGTCGTTTCCTTACGGTGGTCCATGCTGAACACGCCAATTAG 289 consensus_9698#1 AAGAAAGAAGAGGC--TGGCTGAGA--CTTAGTGCTGAAAAAGCCGAATAGTCGGTCTTT 326 * ** ** ** *** * **** * * * ** *** * * * consensus_9698#0 AACGGCGATCATTTTCTAATCCAAGACTGACGGCCGCTAGTTC-CATGCTGGTTA-AACC 997 consensus_9698#2 AACGGCGATCATTTTCTAATCCAAGACTGAGGGCCACTAGTTC-CATGCTGGTTA-AACC 347 consensus_9698#1 TACCTGCATCTCTTTCGCTCTCCCGATTGCGATCCACTCCTACTCGTGGAAATCGCGATC 386 ** *** **** * ** ** ** ** * * * ** * * * consensus_9698#0 GGTTCGGACACACGCACTGATTTTCTAAC---CTTGCGGCAGGCCGACATGACGCCATCC 1054 consensus_9698#2 GGTTCGGACACACGCACTGATTTTCTAAC---CTTGCGGCAGGCCGACATGACGCCATCC 404 consensus_9698#1 GACTTATATCCACACACACACACACTGATGCGCATGTATGAATATGAAGTGCCGTGCTGC 446 * * * *** *** * ** * * ** * ** ** ** * * consensus_9698#0 ACGGAAATAACGCCAAC---GCTTT---GCCGCGCAC---GTTTATCACCAGACGGCAGC 1105 consensus_9698#2 ACGGAAATAACGCCAAC---GCTTT---ACCGCGCAC---GTTTATCACCAGACGGCAGC 455 consensus_9698#1 TTGGTGAAGTCGTTAACCTGGTCTTCACACCGCGTACCCGGCGTGTCCTCCGCCGCCAGC 506 ** * ** *** * ** ***** ** * * ** * * ** **** consensus_9698#0 CATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCC 1165 consensus_9698#2 CATTTTGTTGCAACAATCGTGCCGTTGACCGCATCCGAGGGCCAACTGAACTGCGATGCC 515 consensus_9698#1 T-TCTAATACCAGGGAACATGANCCGCTTCAGCACCGAGCAGAGAGCAAGCCACGGCGGT 565 * * * ** * * ** * ***** * * * ** * consensus_9698#0 GGTTTGCCACAC-----------GCCAGCCA--CGCTACGCACAGCTGCCGCCACTGCAG 1212 consensus_9698#2 GGTTTGCCACAC-----------GCCAGCCA--CGCTACGCACAGCTGCCGCCACTGCAG 562 consensus_9698#1 TGGACGGCACGTTGGATGGGGAAGTAAGGCGAGCGCGATGGGNCGTTTCCGTTACCGGTG 625 * * *** * ** * *** * * * * *** ** * * consensus_9698#0 TAGCAACGCCCTTCCAGCAAC--AACCGGGGGTGCTACCGGGAGACACACCCGGGCGCCC 1270 consensus_9698#2 TAGCAACGCCCTTCCAGCAAC--AACCGGGGGTGCTACCGGGAGACACCCCCGGGCGCCC 620 consensus_9698#1 GTCCATGCTGAACACGCCAATTAGAACGGCGATCATTTTCTAATCCAAGACTGAGGGCCA 685 ** * *** * *** * * * * ** * * * *** consensus_9698#0 GCGCGGCAATGCTCGCAGAAA-CTC--ACGTACGCACCAACCGCTCTGCTTCACCGGCCC 1327 consensus_9698#2 GCGCGGCAATGCTCGCAGAAAGCTC--ACGTACGCACCAACCGCCCATACGTGCCGATTC 678 consensus_9698#1 CTAGTTCCATGCTGGTAAAGCCGTTCGACACACGCACTAATTCCCT-----CGNCCGATC 740 * ***** * * * * ** ****** ** * * * consensus_9698#0 GG-- 1329 consensus_9698#2 TGCT 682 consensus_9698#1 TGC- 743 * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||