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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1929 fasta sequence
[CCGCGTGTGTGCAGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT-CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCAATTTCAACCAATTTA-CAATTTCCTTT-CCTTTGTTTGAT-GCGCAAGCGATGAC-AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCA----CACAC--ACACAATTCTATTCAGACCTTCCT-CCCCCCTAATAC-GGGTCCATATGTGTACTCTATACAGCAACGTATTCGG]
[+] EMBL BM583096 [CCGCGTGTGTGCAGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAAGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGAT ]
[+] EMBL BX607732 [ CGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAA ]
[+] EMBL AGA281993 [ CAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTG ]
[+] EMBL BX613297 [ CGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCACAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGC AGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCG ]
[+] EMBL BM581884 [ ccgCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGATCCCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGG ]
[+] EMBL BX627382 [ GACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCA ]
[-] EMBL AGA280297 [ AGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTTCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTC ]
[+] EMBL BX607280 [ CTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCC CTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAA ]
[+] EMBL BX617802 [ GGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGTCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAA ]
[+] EMBL BX608735 [ cCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCAATTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTC ]
[+] EMBL AGA281495 [ GACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCT ]
[+] EMBL AGA280699 [ CCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCCAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCG ]
[+] EMBL BX615948 [ GGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCAATTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCAT ]
[+] EMBL BM615401 [ ccgGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCATTTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAGGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCA CACAC ACACAATTCTATTCAGACCTTCCTCCCCCCCTAATACGGGGTCCATATGTGTACTCTATACAGCAACGTATTCGG]
[-] EMBL AGA282319 [ TCAATTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCA CACAC ACACAATTNTATTCAGACCTTCCT CCCCCCTAATAC GGGTCCAT ]
[-] EMBL CNS09I7O [ TCAACCAATTTAGCAATTTCCTTTGCCTTTGTTTGATGGCGCAAGCGATGACGGAGAACAACAAAAGTGAAATCCCTAATATGGTGCCACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCACACCCACACAAACACAATTCTAATCAGACCTTC ]
[-] EMBL AGA283091 [ AAAAGTGAAATCCCTAATATGGTGCAAKTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGscttg ]
consensusID : consensus_9699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 751 fasta sequence
[CGAGGTTAAAGCAAACTCGACGAGCGGTCAGCGANGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTACGCTGTCCCAAGGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACAAACACCGTGTGTGTGTGTGTGTGTGTGTCAGGTGGAAGTGTGTGTGTGTCTGTAGTGTGTCAGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTANATTGACCGCGTGCAAAGCGTTCCGCAGTTAGCGGAGGGACCATATTTGCGCAAGGGCAANACTTCCAGAANNCCCCTCTCATCCCTGGGCCGGGCCGTACGCCATCAAGCGGCAGCGCCTCGCAGCTAATCAAACAANCAACGACGGCTGACGCCACACAATGGAGCCGAAAAGGCAACATTCGGAACCGCGACGACGTCGTGGCCGCGAGCAGATGCGGAGGGACAATGCGCGCAAGGTGCACCAGTACANNAGACAACNTGATCCAGGCCGCGCCGAAACACTCATCACGCAAAAGAGTTCCCGCAGCGGGATCA]
[+] EMBL AL693069 [CGAGGTTAAAGCAAACTCGACGAGCGGTCAGCGANGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTACGCTGTCCCAAGGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACAAACACCGTGTGTGTGTGTGTGTGTGTGTCAGGTGGAAGTGTGTGTGTGTCTGTAGTGTGTCAGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTANATTGACCGCGTGCAAAGCGTTCCGCAGTTAGCGGAGGGACCATATTTGCGCAAGGGCAANACTTCCAGAANNCCCCTCTCATCCCTGGGCCGGGCCGTACGCCATCAAGCGGCAGCGCCTCGCAGCTAATCAAACAANCAACGACGGCTGACGCCACACAATGGAGCCGAAAAGGCAACATTCGGAACCGCGACGACGTCGTGGCCGCGAGCAGATGCGGAGGGACAATGCGCGCAAGGTGCACCAGTACANNAGACAACNTGATCCAGGCCGCGCCGAAACACTCATCACGCAAAAGAGTTCCCGCAGCGGGATCA]
consensusID : consensus_9699#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[CCGCCCACGCGTCCGGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTGTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCCGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCGCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACATGCGCGCAAGGTGCAACAGTAC]
[+] EMBL BM615733 [CCGCCCACGCGTCCGGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTGTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCCGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCGCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACATGCGCGCAAGGTGCAACAGTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9699#0 --CCGCGTGTGTGCAGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGG 58
consensus_9699#2 CCGCCCACGCGTCCGGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGG 60
consensus_9699#1 -----------CGAGGTTAAAGCAAACTCGACGAGCGGTCAGCGANGACGAGCTACTTGG 49
* ** ********************** **************
consensus_9699#0 ACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGC 118
consensus_9699#2 ACGCAGCTTTTCCCTTGTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGC 120
consensus_9699#1 ACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGC 109
**************** *******************************************
consensus_9699#0 TGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAA 178
consensus_9699#2 TGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAA 180
consensus_9699#1 TGTACGCTGTCCCAAGGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAA 169
*** *********** ********************************************
consensus_9699#0 ATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGT 238
consensus_9699#2 ATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGT 240
consensus_9699#1 ATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGT 229
************************************************************
consensus_9699#0 CGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTG 298
consensus_9699#2 CGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGT--- 297
consensus_9699#1 CGACGCGCCTCCATCCCCTCGACAGAC-AAACACCGTGTGTGTGTGTGTGTGTGTGT--- 285
*************************** *****************************
consensus_9699#0 TGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTC-GTGTGCGCGCCGTGTCAGCTTACG 357
consensus_9699#2 ---CGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTC-GTGTGCGCACCGTGTCAGCTTACG 353
consensus_9699#1 --CAGGTGGAAGTGTGTGTGTGTCTGTAGTGTGTCAGTGTGCGCACCGTGTCAGCTTACG 343
******************* *** ******* ******** ***************
consensus_9699#0 TCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGG 417
consensus_9699#2 TCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGG 413
consensus_9699#1 TCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGG 403
***************************************** ******************
consensus_9699#0 TGGCAACAGCGCTGAACGGTCTCGAGACTAA-TTGAC-GCGTGCAA-GCGTTCCGC-GTT 473
consensus_9699#2 TGGCAACAGCGCCGAACGGTCTCGAGACTAA-TTGAC-GCGTGCAA-GCGTTCCGC-GTT 469
consensus_9699#1 TGGCAACAGCGCTGAACGGTCTCGAGACTANATTGACCGCGTGCAAAGCGTTCCGCAGTT 463
************ ***************** ***** ******** ********* ***
consensus_9699#0 AGCGGCGGGACCATATT-GCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCC-GGG 531
consensus_9699#2 AGCGGCGGGACCATATT-GCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCC-GGG 527
consensus_9699#1 AGCGGAGGGACCATATTTGCGCAAGGGCAANACTTCCAGAANNCCCCTCTCATCCCTGGG 523
***** *********** ************ ******** * ************* ***
consensus_9699#0 CCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGC-AATCAA-CAAC--ACGACG- 586
consensus_9699#2 CCGGGCCGCACGCCCATCAACCGGCAGCCGCCTCGCAGC-AATCAA-CAAC--ACGACG- 582
consensus_9699#1 CCGGGCCGTACGCC-ATCAAGCGGCAGC-GCCTCGCAGCTAATCAAACAANCAACGACGG 581
******* ***** ***** ******* ********** ****** *** ******
consensus_9699#0 -CGACGCAACA--ATGAG--CGAAAGCACATCG------ACCGCGACGACGTCG--GCCG 633
consensus_9699#2 -CGACGCAACA--ATGAG--CGAAAGCACATCG------ACCGCGACGACGTCG--GCCG 629
consensus_9699#1 CTGACGCCACACAATGGAGCCGAAAAGGCAACATTCGGAACCGCGACGACGTCGTGGCCG 641
***** *** *** ***** ** * *************** ****
consensus_9699#0 CGAGCAG-CGCGGAGG-ACAATGCGCGCAAGGTGCAACAGTACAAA-GACAACCTGATC- 689
consensus_9699#2 CGAGCAG-CGCGGAGG-ACA-TGCGCGCAAGGTGCAACAGTAC----------------- 669
consensus_9699#1 CGAGCAGATGCGGAGGGACAATGCGCGCAAGGTGCACCAGTACANNAGACAACNTGATCC 701
******* ******* *** *************** ******
consensus_9699#0 -AGCCGCGCCGAAACACTCATCACG--AAAGAGTTCCCCGAGCGG-ATCGTGCGCCTGAA 745
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 AGGCCGCGCCGAAACACTCATCACGCAAAAGAGTTCCCGCAGCGGGATCA---------- 751
consensus_9699#0 CGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCT 805
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GAACATTCCAGTCCCGGAACCGATCCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCG 865
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 TCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAA 925
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTG 985
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGAT 1045
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGA 1105
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTC 1165
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGA 1225
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGT 1285
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGA 1345
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAAC 1405
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 AACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCC 1465
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCA 1525
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTG 1585
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTT 1645
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CCCCTTTCCCGCTATCAATTTCAACCAATTTACAATTTCCTTTCCTTTGTTTGATGCGCA 1705
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 AGCGATGACAAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCG 1765
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 TCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTG 1825
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 GATTTTTATCACACCATCCACACCCACACACACACAATTCTATTCAGACCTTCCTCCCCC 1885
consensus_9699#2 ------------------------------------------------------------
consensus_9699#1 ------------------------------------------------------------
consensus_9699#0 CTAATACGGGTCCATATGTGTACTCTATACAGCAACGTATTCGG 1929
consensus_9699#2 --------------------------------------------
consensus_9699#1 --------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||