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Anopheles gambiae
cluster # 9716 cluster # 9716       Sequences # 20       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9716#0 length = 1416 sequences # 19  
consensus_9716#1 length = 410 sequences # 1  

consensusID : consensus_9716#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1416
fasta sequence
                              [CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT-AGCAG-TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG-GCCATCCACTTCCTA-GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC--TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC-GA-GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTG-GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC-GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC-GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT-GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA-GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC-GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA----AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTA------AAAAAAAAAAAAA]

[+] EMBL CNS09HYR             [CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT AGAAGTTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCGTCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGCGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC  TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGAGACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CAC GTCCGTAATCTAGGCCAGCCGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09685             [              TTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT   CAGTTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC  TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGGAGGCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGTGG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CACGGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAACTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM605345             [               ccgaaaAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACCGAAAAAGCGT AGCAG TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC  TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09L9A             [                    ggAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGTAAGC   TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGAGCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC  TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08IWW             [                                                    CTCACGAAAAATACTGAAAAAGCGT AAGTT TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGTAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC  TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCA GGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGA GATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM585154             [                                                      ccgGAAAAATACCGAAAAAGCGT AGCAG TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC  TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACCCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTGGTAACGATCGCGGGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08GA0             [                                                                 CTGAAAAAGCGT CG AGCTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGTAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC  TCATAACGGCGATATCCGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGGAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGTGG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CACGGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTACGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09BRO             [                                                                                                                                                                          GGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAA GGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTATGGCCAGCATC  TCATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX619682             [                                                                                                                                                                                                                                                                          TCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTAGGAAGACTATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCGTTCATAACGGCTATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX610349             [                                                                                                                                                                                                                                                                                                                                                  CAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC  TCATAACGGCTATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAAGGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACATTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAAAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTACCGAGGCGGAAAAGTTAAACCAACAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08IWX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGAACTCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGAACTCAAGTCCGTTGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGTTCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA    AACGAAATAAAGCATTGCTT                                            ]
[-] EMBL CNS09HYS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGAACTCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGAACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCCGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA    AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTA      AAAAAAAAAAAAA]
[-] EMBL CNS09BRP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCAGGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAGCACCTTTCTGTGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCTTTCTGCATGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGCAGAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATAGTGCTACTACTGCTGCCCTCG                                                                                 ]
[-] EMBL CNS08GA1             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGCCCCGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCCAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGTTCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCAACTGCCGAGGCGGAAAAGTTAAACCAACAGGGGAACAGC GGCAGTGCTCCGAAGTATTTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCTGGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA    AACGAAATAAAGCATTGCTTTGAa                                        ]
[+] EMBL BM603872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTTCGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTACTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACGGACGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGGAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAGGAATACTTTTCTTCCTGTGA                                                                                                        ]
[+] EMBL BX622336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACATTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAAAAGCTGCAATCGACCGTACGGGCCACCCGGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTACCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCATAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATTTTCCTCACGAACGCGGACACGGATGGAAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACATTGCTGGAAGGCAAAGGCAACGGGAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAAAGAACGAAATAAAGCATTGCTTTTAGTGATACGTTCG                             ]
[-] EMBL CNS09L9B             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA    AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTG                           ]
[-] EMBL CNS09686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA    AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTAGTTTCTAAAAAAAAAAAA ]
[-] EMBL CNS094M5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA    AACGAAATAAAGCAT                                                 ]


>consensus_9716#0 CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAA AAATACTGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGT TTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAAC GTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGA ACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTC CTAGAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGC GTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATCTCATAACG GCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGC TCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGAGCAGCTGGAAAGGGTGGAAAGC ATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGGACGTATACGAACCGGAC GATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCT GGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGT AAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTAC GACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTG GCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACC GAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCGGCAGTGCTCCG AAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTG CGGATGGTGAAGCTGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGC GGCAAAGGGCAGCTCGTTCTGCAGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAG ATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTG AATAAGTTGAAGAATTTGCCACAGTGCGAAAAGCTAGTCCAAGAATACTTTTCTTCCTGT GATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAACGAAATAAAGCATTGCTTTG AGTGATACGTTCGTGATGTTTTAAAAAAAAAAAAAA



consensusID : consensus_9716#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 410
fasta sequence
                              [ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG]

[+] EMBL AL930097             [ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG]


>consensus_9716#1 ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTT GATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAG GTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTA TTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAA TCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGC CAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGAC CACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9716#0      CTGGATTGTTTACATTGGAGGAAATCAATCTA-TTTACAGCTCTTCGGGACCGCTCACGA 59
consensus_9716#1      -----------------------ATCGCCGAGGTTTACAGCTCTTCGGGAC-GCTCACGA 36
                                             ***       ****************** ********

consensus_9716#0      AAAATACTGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAG 119
consensus_9716#1      AAAATAC-GAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAG 95
                      ******* ****************************************************

consensus_9716#0      TTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAA 179
consensus_9716#1      TTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAA 155
                      **********************************************  ************

consensus_9716#0      CGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGG 239
consensus_9716#1      TGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGG 215
                       ***********************************************************

consensus_9716#0      AACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTT 299
consensus_9716#1      AACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTT 275
                      ************************************************************

consensus_9716#0      CCTAGAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATG 359
consensus_9716#1      CCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATG 335
                      ****************** **** ****************************** *****

consensus_9716#0      CGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATCTCATAAC 419
consensus_9716#1      CGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAAC 395
                      ********************************* **************************

consensus_9716#0      GGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAG 479
consensus_9716#1      GGCGATATTTGATCG--------------------------------------------- 410
                      ***************                                             

consensus_9716#0      CTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGAGCAGCTGGAAAGGGTGGAAAG 539
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      CATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGGACGTATACGAACCGGA 599
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      CGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTC 659
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      TGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCA 719
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      CGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGG 779
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      TAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTA 839
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      CGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCT 899
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      GGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCAC 959
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      CGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCGGCAGTGCTCC 1019
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      GAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCT 1079
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      GCGGATGGTGAAGCTGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAG 1139
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      CGGCAAAGGGCAGCTCGTTCTGCAGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGA 1199
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      GATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGT 1259
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      GAATAAGTTGAAGAATTTGCCACAGTGCGAAAAGCTAGTCCAAGAATACTTTTCTTCCTG 1319
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      TGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAACGAAATAAAGCATTGCTTT 1379
consensus_9716#1      ------------------------------------------------------------
                                                                                  

consensus_9716#0      GAGTGATACGTTCGTGATGTTTTAAAAAAAAAAAAAA 1416
consensus_9716#1      -------------------------------------
                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)