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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9741#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1750 fasta sequence
[CTCTTACGGAGAAGATTGTGGGCCCATCCCCGGGAAGGGACGGCTTTGGCATCGATCGTCCGCCCTCTCCGCGTACACTCGTCTAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGTCGAAGGCTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTTAGAATGAGCTGAACAAATCAACGCTCTCCCAGTCGCGTCGCGGGTTAGTTTTTATGTGTGTGTGTGTGTGTGCGAGAGTTGCATAAACCAACCTCCGTGTGTGGTGGTGGCGACCCTTTTCGAGCTTTCGAAGGGTTGCCGCGGGGGGTGCAATCTTTCACGATTGCTATTCTTTACAACCGGCACACAAACCCCCCCCCCCCCTCACAGTTCATATAATGTAAATATTGTTACTGCACGTAAACAAACACGAACACGTTATATACGCAGACCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACAATTGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGTCATAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACGGCAACGGTTTTACGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAGCGGAAGAAG-AGAAAACAAAACACAGAAAAAAAACATAGAACATCAAGAGGTGTGTAGGAAAGAACCGCGCAAACTTGGTGCGCGAACCCCCGGCGGCAAGCGATTAGAAAGAGAGAGAGAGAGAGGGAGAGTGCAAGCTAGGAGCTGCAAACGAAAACATAATAATTACACACACACAACTGCTAATACTACTATTATTATGATTACCTATTATAATTGCTACGAATAATGGTGTTTTTCTACCCGTTGCTATGGGGGAAAGATATGAGCGCGAGAGAGAAGGCAACGGTAATAATACGCGGAATAGTGTTAAACGCGATCTAATACGCAAGCGAATGCGCGCCTTGACACGCGAAAATGGGGCGATTTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC-G-AGAAAGGTGAAACGAGCGAAATGAAATGTGTTCCATCGAGT--AAAAAAATAAAACAAACGGAA--------GCATCAGATCAAGTGAGAATGGCACGCGTCGAATGGCTTCAGGTCACCCCACCGCCGCCCCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAGGAGAGCGGAAAAGGGAATCAGTAATAACAG--ACACACACACGCACGAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGGCTAAACAAACAAAAC]
[+] EMBL BX610533 [CTCTTACGGAGAAGATTGTGGGCCCATCCCCGGGAAGGGACGGCTTTGGCATCGATCGTCCGCCCTCTCCGCGTACACTCGTCTAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGTCGAAGGCTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTTAGAATGAGCTGAACAAATCAACGCTCTCCCAGTCGCGTCGCGGGTTAGTTTTTATGTGTGTGTGTGTGTGTGCGAGAGTTGCATAAACCAACCTCCGTGTGTGGTGGTGGCGACCCTTTTCGAGCTTTCGAAGGGTTGCCGCGGGGGGTGCAATCTTTCACGATTGCTATTCTTTACAACCGGCACACAAACCCCCCCCCCCCCTCACAGTTCATATAATGTAAATATTGTTACTGCACGTAAACAAACACGAACACGTTATATACGCAGACCCTGTTGCAGAT ]
[+] EMBL BX610534 [ GTGGGCCCATCCCCGGGAAGGGACGGCTTTTGCATCGATCGTCCGCCCTCTCCGCGTACACTCGTCTAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGTCGAAGGCTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTTAGAATGAGCTGAACAAATCAACGCTCTCCCAGTCGCGTCGCGGGTTAGTTTTTATGTGTGTGTGTGTGTGTGCGAGAGTTGCATAAACCAACCTCCGTGTGTGGTGGTGGCGACCCTTTTCGAGCTTTCGAAGGGTTGCCGCGGGGGGTGCAATCTTTCACGATTGCTATTCTTTACAACCGGCACACAAACCCCCCCCCCCCCTCACAGTTCATA ]
[+] EMBL BX608879 [ CTCTCCGCGTACACTCGTCTAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGTCGAAGGTTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTTAGAATGAGCTGAACAAATCAACGCTCTCCCAGTCGCGTCGCGGGTTAGTTTTTATTTGTGTGTGTGTGTGTGCGAGAGTTGCATAAACCAACCTCCTTGTGTGGTGGTGGCGACCCTTTTCGAGCTTTCGAAGGGTTGCCGCGGGGGGTGCAATCTTTCACGATTGCTATTCTTTACAACCGGCACACAAACCCCCCCCCCCCCTCACAGTTCATATAATGTAAATATTGTTACTGCACGTAAACAAACACGAACACGTTATATACGCAGACCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACAATTGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGTCATAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACGGCAACGGTT ]
[+] EMBL BX613025 [ tAATGAGCTGAACAAATCAACGCTCTCCCAGTCGCGTCGCGGGTTAGTTTTTATGTGTGTGTGTGTGTGTGCGAGAGTTGCATAAACCAACCTCCGTGTGTGGTGGTGGCGACCCTTTTCGAGCTTTCGAAGGGTTGCCGCGGGGGGTGCAATCTTTCACGATTGCTATTCTTTACAACCGGCACACAAACCCCCCCCCCCCCTCACAGTTCATATAATGTAAATATTGTTACTGCACGTAAACAAACACGAACACGTTATATACGCAGACCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACAATTGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAG AAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGTCATAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACAGCAACGGTTTTACGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAA ]
[+] EMBL BM630364 [ ccgTGTAAATATTGTTACTGCACGTAAACAAACACGAACACGTTATATACGCAGACCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACAATTGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGTCACAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACGGCAACGGTTTTACGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAGCGGAAGAAGAAGAAAAC ]
[+] EMBL BX615648 [ TGCGACAATTGATGATCGATCGGTCGACTTGGTGGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGGGGTGGTGATGATGAGATGGTCATAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACGGCAACGGTTTTACGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGGGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTAAAAC ]
[+] EMBL BX627509 [ CTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAGCGGAAGAAG AGAAAAAAAAACACAGAAAAAAAACATAGAACATCAAGAGGTGTGTAGGAAAGAACCGCGCAAACTTGGTGCGCGAACCCCCGGCGGCAAGCGATTAGAAAGAGAGAGAGAGAGAGGGAGAGTGCAAGCTAGGAGCTGCAAACGAAAACATAATAATTACACACACACAACTGCTAATACTACTATTATTATGATTACCTATTATAATTGCTACGAATAATGGTGTTTTTCTACCCGTTGCTATGGGGGAAAGATATGAGCGCGAGAGAGAAGGCAACGGTAATAATACGCGGAATAGTGTTAAACGCGATCTAATACGCAAGCGAATGCGCGCCTTGACACGCGAAAATGGGGCGATTTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC G AGAAAGGTGAAACGAGCGAAATGAAATGTGT ]
[+] EMBL BX608732 [ AACCCCCGGCGGCAAGCGATTAGAAAGAGAGAGAGAGAGAGGGAGAGTGCAAGCTAGGAGCTGCAAACGAAAACATAATAATTACACACACACAACTGCTAATACTACTATTATTATGATTACCTATTATAATTGCTACGAATAATGGTGTTTTTCTACCCGTTGCTGTGAGGGAAAGATTTAAGCGCGAGAGAGAAGGCAACGGTAATAATACGCGGAATAGTGTTAAACGCGATCTAATACGCAAGCGAATGCGCGCCTTGACACGCGAACATGGGGCGATTTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC GAAAAAAGGTGAAACGAGCGAAATGAAATGTGTTCCATCGAGT AAAAAAATAAAACAAACGGAA GCATCAGATCAAGTGAGAATGGCACGCGTCGAATGGCTTCAGGTCACCCCACCGCCGCCCCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAGGAGA ]
[+] EMBL BX628622 [ ACGCGATCTAATACGCAAGCGAATGCGCGCCTTGACACGCGAAAATGGGGCGATTTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC G AGAAAGGTGAAACGAGCGAAATGAAATGTGTTCCATCGAGTA AAAAAAAAAAAACAAACGGAAGCATGCATGCATCAGATCAAGTGGGAATGGCACGCGTCGTATGGCTTCGGGTCATCCCATCGCCGCCGCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAAGAGAGCGGAAAAGGGAATCAGTAATAACAGACACACACACACGCACGAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAA ]
[+] EMBL BM655275 [ cCGCCTTGACACGCGAACATGGGGCGATTTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGCAA AAAAAGGTGAAACGAGCGAAATGAAATGTGTTCCATCGAGT AAAAAAATAAAACAAACGGAA GCATCAGATCAAGTGAGAATGGCACGCGTCGAATGGCTTCAGGTCACCCCACCGCCGCCCCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAGGAGAGCGGAAAAGGGAATCAGTAATAACAG ACACACACACGCACAAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGGCTAAACAAAC ]
[+] EMBL BX618797 [ TTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC GAAAAAAGGTGAAACGAGCGAAATGAAATGTGT ]
[+] EMBL BX620011 [ TGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC G AGAAAGGTGAAACGAGCGAAATGAAATGTGTTCCATCGAGTA AAAAAAAAAAAACAAACGGAAGCATGCATGCATCAGATCAAGTGGGAATGGCACGCGTCGTATGGCTTCGGGTCATCCCATCGCCGCCGCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAAGAGAGCGGAAAAGGGAATCAGTAATAACAGACACACACACACGCACGAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACAGC ]
[+] EMBL BX626752 [ GTGTCACTTGAAAAGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCTCGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGC G AGAAAGGTGAAACGAGCGAAATGAAATGTGTTCCATCGAGTAAAAAAAAAAAAAACAAACGGAAGCATGCATGCATCAGATCAAGTGGGAATGGCACGCGTCGTATGGCTTCGGGTCATCCCATCGCCGCCGCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAAGAGAGCGGAAAAGGGAATCAGTAATAACAGACACACACACACGCACGAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACAGC ]
[+] EMBL BX613391 [ ATGAAATGTGTTCCATCGAGT AAAAAAATAAAACAAACGGAA GCATCAGATCAAGTGAGAATGGCACGCGTCGAATGGCTTCAGGTCACCCCACCGCCGCCCCCGCCTCCCTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATGGTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAAGGAGAGCGGAAAAGGGAATCAGTAATAACAG ACACACACACGCAAAAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGGCTAAACAAACAAAAC]
consensusID : consensus_9741#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 614 fasta sequence
[CCGCTTAAAGAAAGATATAAAGACAGCAAGCAGAAACGGCGACCTCAACGGAAAGGTGTGATTTGAAAATAAAGGAGAGCGGAAAAGGGAATCAGTAATAACAGACACACACACGCAAAAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGGCTAAACAAACAAAACAAAACAAAACAAAAAAAGAACCTACGCGTTATTAAAAAGCAAACGAAACGGGATTATAATTTTGAAGAAACAAAAATATATATTATGGAAAACATTGACAGTGAAAGCGAGAAGTGAGATAGCGACAGCGAGAAAGCGAGAAAGAGAGACAGAGAGGAAGAGAGAAAGCGAGAGAGTGCAAATATATTTAAAGTTTTATTA-TTTCCCCCTCCTCCTCCTTTTGTTCATTCCGTTCGGTTGATTTCTACCTTGGAACGTTATTTTCTAGTTAAGAAAGTTTCGGAACAACGGAATGGAATTCATCCCTTGATTAGTTCTCAATGCTTATAAGGAAAATGCTCAGTAAAAATTCCAATTGCTATTT]
[+] EMBL BM648473 [CCGCTTAAAGAAAGATATAAAGACAGCAAGCAGAAACGGCGACCTCAACGGAAAGGTGTGATTTGAAAATAAAGGAGAGCGGAAAAGGGAATCAGTAATAACAGACACACACACGCAAAAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGGCTAAACAAACAAAACAAAACAAAACAAAAAAAGAACCTACGCGTTATTAAAAAGCAAACGAAACGGGATTATAATTTTGAAGAAACAAAAATATATATTATGGAAAACATTGACAGTGAAAGCGAGAAGTGAGATAGCGACAGCGAGAAAGCGAGAAAGAGAGACAGAGAGGAAGAGAGAAAGCGAGAGAGTGCAAATATATTTAAAGTTTTATTA TTTCCCCCTCCTCCTCCTTTTGTTCATTCCGTTCGGTTGATTTCTACCTTGGAACGTTATTTTCTAGTTAAGAAAGTTTCGGAACAACGGAATGGAATTCATCCCTTGATTAGTTCTCAATGCTTATAAGGAAAATGCTCAGTAAAAATTCCAATTGCTATTT]
[+] EMBL BM599671 [ ccgAAACAAAAAAAGAACCTACGCGTTATTAAAAAGCAAACGAAACGGGATTATAATTTTGAAGAAACAAAAATATATATTATGGAAAACATTGACAGTGAAAGCGAGAAGTGAGATAGCGACAGCGAGAAAGCGAGAAAGAGAGACAGAGAGGAAGAGAGAAAGCGAGAGAGTGCAAATATATTTAAAGTTTTATTATTTTCCCCCTCCTCCTCCTTTTGTTCATTCCGTTCGGTTGATTTCTACCTTGGAACGTTATTTTCTAGTTAAGAAAGTTTCGGAACAACGGAATGGAATTCATCCCATGATTAGTTCTCAATGCTTATAAGGAAAATGCTCAGTAAAAATTCCAATTGCTATTT]
consensusID : consensus_9741#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence
[GAATCGGCCGAGGGANGNNAAGTGGGCCATCCCCGGGTAAGCGGTCGGTTTCGGCATCGATCTGTCCGCCCTCCCTGCGTACACTCGCCCAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGTCGAAGGCTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTAGAATGAGCTGAAACAAATCAACGCTCTCCCAGTCGCGCCGCGGGTTTAGTTTATGTGTGTTGTGGTGTTGTGCGAGGAGGTTTGCATAAAACCAAACCTTCCCCTTGTTGTGGGTGGGTGGTTGAACCCCCTTTTTTCGGAGGGCTTTTCGAAACGGGTTTTGCCCGCTGTATGAGTGGGTAGCAAAAACTTTTTCACACCGGAATTTTGCCTTATTTTCTTTTACCAACAACAAAAACACCCCCCCCCTTCTATCAAGTTCCCCACTAATTTAACTTGTTACGACATTATTTTGGTTTACCTTGCCGACCGTTAAAAACCACAAAGCAGACCNGAAACACACCGTTTTATTAATAACTGCCAGGAAACCCCCTNGTTTGCCAGCNAATTANTTT]
[+] EMBL BX468577 [GAATCGGCCGAGGGANGNNAAGTGGGCCATCCCCGGGTAAGCGGTCGGTTTCGGCATCGATCTGTCCGCCCTCCCTGCGTACACTCGCCCAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGTCGAAGGCTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTAGAATGAGCTGAAACAAATCAACGCTCTCCCAGTCGCGCCGCGGGTTTAGTTTATGTGTGTTGTGGTGTTGTGCGAGGAGGTTTGCATAAAACCAAACCTTCCCCTTGTTGTGGGTGGGTGGTTGAACCCCCTTTTTTCGGAGGGCTTTTCGAAACGGGTTTTGCCCGCTGTATGAGTGGGTAGCAAAAACTTTTTCACACCGGAATTTTGCCTTATTTTCTTTTACCAACAACAAAAACACCCCCCCCCTTCTATCAAGTTCCCCACTAATTTAACTTGTTACGACATTATTTTGGTTTACCTTGCCGACCGTTAAAAACCACAAAGCAGACCNGAAACACACCGTTTTATTAATAACTGCCAGGAAACCCCCTNGTTTGCCAGCNAATTANTTT]
consensusID : consensus_9741#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 471 fasta sequence
[TACACACTATACCCCCCCCTCACAGTCCATATAATGTAAATATTGTTACTGCACGTAAACNAACACGAACACGTTATATACGCAGACCCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACACTTGATGATCGATCGGTCGACTTGGTTGGCAGCNAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGCCACAGGACATCACATCCTACCCTTACGCCATCGAGAAACGGCAACGGTTTTACGGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTA-TTAAAACCT-ATT-TCTAAAATGCCCT-CTTATATAATTGCTATGGCAAGCGGAAGAAGAGTAAAAAAAAANAGCAGGCATGT]
[-] EMBL BX466643 [TACACACTATACCCCCCCCTCACAGTCCATATAATGTAAATATTGTTACTGCACGTAAACNAACACGAACACGTTATATACGCAGACCCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACACTTGATGATCGATCGGTCGACTTGGTTGGCAGCNAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGCCACAGGACATCACATCCTACCCTTACGCCATCGAGAAACGGCAACGGTTTTACGGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTA TTAAAACCT ATT TCTAAAATGCCCT CTTATATAATTGCTATGGCAAGCGGAAGAAGAGTAAAAAAAAANAGCAGGCATGT]
[+] EMBL BX619888 [ CAGA CCCTGTTGCAGATGTTGTGTGCCTGTCTAGTGCGACACTTGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGCCACAGGACATCACATCCTACCCTTACGCCATCGAGAAACGGCAACGGTTTTACGGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTTAAAACCTNATTNTCTAAAATGCCCTCCTTATATAATTGCTATGGCAAGgcg ]
consensusID : consensus_9741#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 365 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGTCACAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACGGCAACGGTTTTACGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAGCGGAAGAAGAAGAAAACAAACACAG]
[+] EMBL BM587584 [CCGCCCACGCGTCCGCCCACGCGTCCGGATGATCGATCGGTCGACTTGGTTGGCAGCAAAAACCGGAGCAAGAAAAGACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTGGTGGTGATGATGAGATGGTCACAGGACATCACATCCTACTACCCTCACGCCGTCGAGAAACGGCAACGGTTTTACGGCGTCATCGGTGCCGCTCGCTGGAAGCAAGGTGTAAACTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCATACTATTTAAATTATTAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAGCGGAAGAAGAAGAAAACAAACACAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 CTCTTACGGAGAAGATTGTGGGCCCATCCCCGGGAAGGGACGGCTTTGGCATCGATCGTC 60
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 CGCCCTCTCCGCGTACACTCGTCTAATTGCTTCATCCTTGTAAAATTGGCTTTGTTTTGT 120
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 CGAAGGCTGTTTGTACATAGTGCGAATAGTAAAGTTTAATAAGAATTTTGTTTTAGAATG 180
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 AGCTGAACAAATCAACGCTCTCCCAGTCGCGTCGCGGGTTAGTTTTTATGTGTGTGTGTG 240
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 TGTGTGCGAGAGTTGCATAAACCAACCTCCGTGTGTGGTGGTGGCGACCCTTTTCGAGCT 300
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 -----------------------------------------------------------T 1
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 TTCGAAGGGTTGCCGCGGGGGGTGCAATCTTTCACGATTGCTATTCTTTACAACCGGCAC 360
consensus_9741#2 --------------------------------------------GAATCGGCCGAGGGAN 16
consensus_9741#1 ----CCGCTTAAAGAAAGATATAAAGACAGCAAGCAGAAACGGCGACCTCAACGGAAAGG 56
consensus_9741#3 ACACACTATACCCCCCCCTCACAGTCCATATAATGTAAATATTGTTACTGCACGTAAACN 61
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 ACAAACCCCCCCCCCCCCTCACAGTTCATATAATGTAAATATTGTTACTGCACGTAAACA 420
consensus_9741#2 GNNAAGTGGGCCATCCCCGGGTAAGCGGT-CGGTTTCGGCATCGATCTGTCCGCCCTCCC 75
consensus_9741#1 TGTGATTTGAAAATAAAGGAGAGCGGAAAAGGGAATCAGTAATAACA-GACACACACACG 115
consensus_9741#3 AACACGAACACGTTATATACGCAGACCCCTGTTGCAGATGTTGTGTGCCTGTCTAGT-GC 120
consensus_9741#4 ----------------------------------------CCGCCCACGCGTCCGCCCAC 20
consensus_9741#0 AACACGAACACGTTATATACGCAGACCC-TGTTGCAGATGTTGTGTGCCTGTCTAGT-GC 478
consensus_9741#2 TGCGTACACTCGCCCAATTGCTTCATCCTTGTAAAATTGGCTTTGT-TTTGTCGAAGGCT 134
consensus_9741#1 CAAAAGCGAACGTTACACACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACC 175
***
consensus_9741#3 GACACTTGA------TGAT-CGATCGGTCGACTTGGTTG-GCAGCNAAAACCGGAGCAAG 172
consensus_9741#4 GCGTCCGGA------TGAT-CGATCGGTCGACTTGGTTG-GCAGCAAAAACCGGAGCAAG 72
consensus_9741#0 GACAATTGA------TGAT-CGATCGGTCGACTTGGTTG-GCAGCAAAAACCGGAGCAAG 530
consensus_9741#2 GTTTGTACA------TAGTGCGAATAGTAAAGTTTAATA-AGAATTTTGTTTAGAATGAG 187
consensus_9741#1 GCATAGAGAGTTCTGTAATAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGG 235
* * * * * * * * * ** *
consensus_9741#3 AAAAG---ACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTG 229
consensus_9741#4 AAAAG---ACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTG 129
consensus_9741#0 AAAAG---ACGGAAGGCATCGTATGTGGATGTGTGTGTGAGTGTGTCAGTGGCGTGAGTG 587
consensus_9741#2 CTGAA---AC--AAATCAACGCTCTCCCAGTCGCGC-CGCGGGTTTAGTTTATGTGTGTT 241
consensus_9741#1 CTAAACAAACAAAACAAAACAAAACAAAAAAAGAACCTACGCGTTATTAAAAAGCAAACG 295
* ** ** * * * * * ** *
consensus_9741#3 GTGGTGATG-ATGAGATGGCC-ACAGGACATCACATCCTA---CCCTTAC-GCCATCGAG 283
consensus_9741#4 GTGGTGATG-ATGAGATGGTC-ACAGGACATCACATCCTACTACCCTCAC-GCCGTCGAG 186
consensus_9741#0 GTGGTGATG-ATGAGATGGTC-ATAGGACATCACATCCTACTACCCTCAC-GCCGTCGAG 644
consensus_9741#2 GTGGTGTTGTGCGAGGAGGTTTGCATAAAACCAAACCTTCCCCTTGTTGT-GGGTGGGTG 300
consensus_9741#1 AAACGGGATTATAATTTTGAAGAAACAAAAATATATATTATGGAAAACATTGACAGTGAA 355
* * * * * * * * * * *
consensus_9741#3 AAACGGCAACGGTTTTACGGG--------CGTCATCGGTGCCGCTCGCTGGA--AGCAAG 333
consensus_9741#4 AAACGGCAACGGTTTTACGG---------CGTCATCGGTGCCGCTCGCTGGA--AGCAAG 235
consensus_9741#0 AAACGGCAACGGTTTTACGG---------CGTCATCGGTGCCGCTCGCTGGA--AGCAAG 693
consensus_9741#2 GTTGAACCCCCTTTTTTCGGAGGGCTTTTCGAAACGGGTTTTGCCCGCTGTATGAGTGGG 360
consensus_9741#1 AGCGAGAAGTGAGATAGCGACAG----CGAGAAAGCGAGAAAGAGAGACAGAGAGGAAGA 411
* ** * * * * * * *
consensus_9741#3 GTGTAAA----------CTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCA----TA 379
consensus_9741#4 GTGTAAA----------CTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCA----TA 281
consensus_9741#0 GTGTAAA----------CTGCGGAAATGTGTGTGAGTGTGTGCGACTTGTTTCA----TA 739
consensus_9741#2 TAGCAAAAACTTTTTCACACCGGAATTTTGCCTTATTTTCTTTTACCAACAACAAAAACA 420
consensus_9741#1 GAGAAAGCGAG-----AGAGTGCAAATATATTTAAAGTTTTATTATTTCCCCC-----TC 461
* ** * ** * * * * * * * *
consensus_9741#3 CTATTTAAATTAT-TAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAG 438
consensus_9741#4 CTATTTAAATTAT-TAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAG 340
consensus_9741#0 CTATTTAAATTAT-TAAAACCTATTTCTAAAATGCCCTCTTATATAATTGCTATGGCAAG 798
consensus_9741#2 CCCCCCCCCTTCTATCAAGTTCCCCACTAATTTAACTTGTTACGACATTATTTTGGTTTA 480
consensus_9741#1 CTCCTCCTTTTGT-TCATTCCGTTCGGTTGATTTCTACCTTGGAACGTTATTTT--CTAG 518
* ** * * * * * ** ** * *
consensus_9741#3 CG--GAAGAAGAGTAAAAAAAA-ANAGCAGGCATGT------------------------ 471
consensus_9741#4 CG--GAAGAAGA--AGAAAACA-AACACAG------------------------------ 365
consensus_9741#0 CG--GAAGAAGA--GAAAACAA-AACACAGAAAAAAAACATAGAACATCAAGAGGTGTGT 853
consensus_9741#2 CCTTGCCGACCGTTAAAAACCACAAAGCAGACCNGAAACACACCGTTTTATTAATAACTG 540
consensus_9741#1 TTAAGAAAGTTTCGGAACAACG-GAATGGAATTCATCCCTTGATTAGTTCTCAATGCTTA 577
* * *
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 AGGAAAGAACCGCGCAAACTTGGTGCGCGAACCCCCGGCGGCAAGCGATTAGAAAGAGAG 913
consensus_9741#2 CCAGGAAACCCCCTNGTTTGCCAGCNAATTANTTT------------------------- 575
consensus_9741#1 TAAGGAAAATGCTCAGTAAAAATTCCAATTGCTATTT----------------------- 614
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 AGAGAGAGAGGGAGAGTGCAAGCTAGGAGCTGCAAACGAAAACATAATAATTACACACAC 973
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 ACAACTGCTAATACTACTATTATTATGATTACCTATTATAATTGCTACGAATAATGGTGT 1033
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 TTTTCTACCCGTTGCTATGGGGGAAAGATATGAGCGCGAGAGAGAAGGCAACGGTAATAA 1093
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 TACGCGGAATAGTGTTAAACGCGATCTAATACGCAAGCGAATGCGCGCCTTGACACGCGA 1153
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 AAATGGGGCGATTTGTATGTGTGTGTATGTGTTTGTGATGCGTTAGTGTGTCACTTGAAA 1213
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 AGCGTTGGGTGGGGAAATGGCCCGGCTCTTCTTAAGCCGCGCTCAATGTCAGCAAATGCT 1273
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 CGAAATGTGCCGAAATGCTAAATGTCCCCGAAAAGAACAGCAAAGCCGCGAGAAAGGTGA 1333
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 AACGAGCGAAATGAAATGTGTTCCATCGAGTAAAAAAATAAAACAAACGGAAGCATCAGA 1393
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 TCAAGTGAGAATGGCACGCGTCGAATGGCTTCAGGTCACCCCACCGCCGCCCCCGCCTCC 1453
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 CTGCGTTGTTCCATCTGGCTGGTGGAACCCGGAGCGTGATTTGGTTTTATTTCCTTCATG 1513
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 GTAAATAAAATTTAAATCTTAAACGACGACCTCAACGGAAAGGTGTGATTTGAAAATAAA 1573
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 GGAGAGCGGAAAAGGGAATCAGTAATAACAGACACACACACGCACGAGCGAACGTTACAC 1633
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ------------------------------------------------------------
consensus_9741#4 ------------------------------------------------------------
consensus_9741#0 ACACAAACACACGCATCGTTCCGGGAGTGCATGTCAAGGACCGCATAGAGAGTTCTGTAA 1693
consensus_9741#2 ------------------------------------------------------------
consensus_9741#1 ------------------------------------------------------------
consensus_9741#3 ---------------------------------------------------------
consensus_9741#4 ---------------------------------------------------------
consensus_9741#0 TAATATTCTTAAAGAAAGATATAAAACAGCAAGCAGAAACGGCTAAACAAACAAAAC 1750
consensus_9741#2 ---------------------------------------------------------
consensus_9741#1 ---------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||