These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9745#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1250 fasta sequence [AGTTCTGGCCAGCTTCAGGTAAATGTGGTAATTTGT-GTGGG-GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA-AC-TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG-AAG-AACTCCG-ACCA-TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA-ATCACTGCCGGCAACGGCAGCCCCCCGATCCGTACAGCTACACGCCG-ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG-ACCAATCAGGATTA-CGTCGT-AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC-GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG-TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC-GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA---AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA-AGGAAA-AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAATGCATCCTCAGAAACCCC] [+] EMBL CNS08UEP [AGTTCTGGCCAGCTTCAGGTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCA ACCA TCTTGGCCAGTACCACACCACAGATCGCCGGCACA ] [+] EMBL CNS08CQ5 [ CTGGCCAGCTTCAGGTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGTCGGCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCTACGGCAGCTCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACCATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGC CATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACTTTCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCACACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCACTTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAA AGGTGAACGGGTGA ] [+] EMBL CNS08HT9 [ aaaaaGGCCAGCTTCAGGTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAACAC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCA ACCA TCTTGGCCAGTACCACACCACAGATCGCCGGCACATCCAAGGGGTCCGAATCTAGACATGCAGCATCCGCTAA ATCACTGCCGGCTACGGCA CCCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAATACAAATCTTTACGCGCCCGATCAAAGCGACAACAAAAAGGAAAGCATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATTCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACATG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGGTTCTTAACGTGGCGTCGTTTTCCGTGACGTGCGCCACTTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTA ] [+] EMBL CNS09O2V [ GTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCA CCCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATG AAATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGC ] [+] EMBL CNS09KBF [ AAATGTGGTAATTTGT GTGGGAGCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCAGCTCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACCCAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAGTTCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCACTTTTAGCGGGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAAT ] [+] EMBL CNS0975K [ TGGTAATTTGTGGTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATACTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCACTCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCAGCACCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAA TTTCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCTGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTACTACTGTTGGACTGTAGCGAGCCGGTGTTTG ] [+] EMBL CNS08PBA [ aGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGTCGGCACATCCAAGGGGTCCGAATCTAAGCATGCAGCATCCGCTAA ATCACTGCCGGCTACGGCAG CCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACCATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCACACGGCACCAG TCACGATTCCCGCGAACGGATGATTAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGTTTTAGC GGTGACTCCGGAGC ] [+] EMBL CNS09HP6 [ GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCA CTCCCCGATCCGTACAGCTACACGCCG GTGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGC CATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATTCTTACCCTTATTTTTTCATAAA ] [+] EMBL BX619350 [ GAAAATTCTGCTCAAA ACGTCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGNAAGAAACTCCGNACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAANATCACTGCCGGCAACGGCAGCCCCCGGATCCGTACAGCTACACGCCGNATGGNGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGAACCAATCAGGATTANCGTCGTNAATCGGAACTATCGGTATGCCCGGCGTTGGTAAAT ] [-] EMBL CNS09KBG [ AACGGCAG CCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACCCAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAAT ] [-] EMBL CNS08HTA [ TGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAATACAAATCTTTACGCGCCCGATCAAAGCGACAACAAAAAGGAAAGCATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATTCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGGTTCTTAACGTGGCGTCGTTTTCCGTGACGTGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAAAGCAGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTATGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGTGATCAGACATCGCTACATTTTGTAGAATAAAACTAATGCATCCTtttt ] [-] EMBL CNS08CQ6 [ TTCTAAACGAG ACAAATAAGGATTA CGTCGT AATCGGAACCATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTATACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATTTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAAAAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCACACGGCACAAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAA AGGTGAAACGGTGAACATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGGTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAACTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTATGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGTGATCAGACATCGCTACATTTTGTAGAATAAAACTAATGCATCC ] [+] EMBL BX626821 [ TTGCTCAATACAAATCTTTACGCGCCCGATCAAAGCGACAACAAAAAGGAAAGCATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATTCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGGTTCTTAACGTGGCGTCGTTTTCCGTGACGTGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACNGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCNATTGCTCGGAAAAGGCATGGGGCCNAGCGCTTGTAAAGCTAATCGATT ] [-] EMBL CNS09O2W [ CATCACCGAGGATCGGTTAATACTTTTGTACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGGCAAGTACGAAAAGCTGAGAGGAAAGAGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAA ] [+] EMBL BX622485 [ AGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAATGCATCCTCAGAAA ] [-] EMBL CNS09HP7 [ AAAGAGAAAGAAGAGATGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGC ] [-] EMBL CNS0975L [ GTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTT ATAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAAATAATcaata ] [-] EMBL CNS08UEQ [ tATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTATGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGTGATCAGACATCGCTACATTTTGTAGAATAAAACTAATGCATCCTCAAAAACCCC] consensusID : consensus_9745#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 993 fasta sequence [CCAAGAATCGGCACGAGGCAGATCGCCGTCACATCCAATGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGGCTGATGCGTACCCTGATGTGGGCACGAAAACTGATNGACCCCAGTTACAATTCCGGGCCAAGGCCACCAAGGCTTGNTGGTTTCCATNCCGGGAACAAGGGTNAGTTGCCCGCCANCGGCAACCAGTCACCGAATTCCCGGGGAAACGGATGATCAATCTGGTACCGGGCGGGATGTTTCTTAACGTTGACGTTCGGTTTTCCCGTGACGAAGCGCCCAAGGCTTTTANTCCGGTTGAACTTCCCGGAGAGGCACACAGGGAGGCGCAAATTGTTTCACACTTTGATNTAAGCAAATNTTTCCCCCCGGGTTTAGAAACAAGGGNTGACAACCGGTTNAAGGCATTTCCCGGGGAACATTTTAACAGGGGACANGACCCATACATTGGTCGAGCTTAACCGGGCNNATCNNGTTACCGCCTTGGNACGGGGANAGTTTAATGGGGCCGGCCAGTTGTC] [+] EMBL BX467349 [CCAAGAATCGGCACGAGGCAGATCGCCGTCACATCCAATGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGGCTGATGCGTACCCTGATGTGGGCACGAAAACTGATNGACCCCAGTTACAATTCCGGGCCAAGGCCACCAAGGCTTGNTGGTTTCCATNCCGGGAACAAGGGTNAGTTGCCCGCCANCGGCAACCAGTCACCGAATTCCCGGGGAAACGGATGATCAATCTGGTACCGGGCGGGATGTTTCTTAACGTTGACGTTCGGTTTTCCCGTGACGAAGCGCCCAAGGCTTTTANTCCGGTTGAACTTCCCGGAGAGGCACACAGGGAGGCGCAAATTGTTTCACACTTTGATNTAAGCAAATNTTTCCCCCCGGGTTTAGAAACAAGGGNTGACAACCGGTTNAAGGCATTTCCCGGGGAACATTTTAACAGGGGACANGACCCATACATTGGTCGAGCTTAACCGGGCNNATCNNGTTACCGCCTTGGNACGGGGANAGTTTAATGGGGCCGGCCAGTTGTC] consensusID : consensus_9745#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence [CCGCCCACGCGTCCGAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTG] [+] EMBL BM582172 [CCGCCCACGCGTCCGAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9745#0 AGTTCTGGCCAGCTTCAGGTAAATGTGGTAATTTGTGTGGGGCATGTGAACGAAAATCTA 60 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 ------------------------------------------------------------ consensus_9745#0 AACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGA 120 consensus_9745#2 ----CCGCCCACGCGTCCGAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGA 56 consensus_9745#1 ------------------------------------------------------------ consensus_9745#0 TGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAG 180 consensus_9745#2 TGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAG 116 consensus_9745#1 ----------------------------------------------------CCAAGAAT 8 * consensus_9745#0 TACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGC 240 consensus_9745#2 TACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGC 176 consensus_9745#1 CGGCACGAGGCAGATCGCCGTCACATCCAATGGGTCCGAATCTAGGCATGCAGCATCCGC 68 *** ******************** ***************************** consensus_9745#0 TAAATCACTGCCGGCAACGGCAGCCCCCCGATCCGTACAGCTACACGCCGATGGAGGGGT 300 consensus_9745#2 TAAATCACTGCCGGCAACGGCAGCCCCC-GATCCGTACAGCTACACGCCGATGGAGGGGT 235 consensus_9745#1 TAAATCACTGCCGGCAACGGCAGCCCCC-GATCCGTACAGCTACACGCCGATG-AGGGGT 126 **************************** ************************ ****** consensus_9745#0 CCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACG 360 consensus_9745#2 CCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACG 295 consensus_9745#1 CCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACG 186 ************************************************************ consensus_9745#0 AGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGA 420 consensus_9745#2 AGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGA 355 consensus_9745#1 AGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGA 246 ************************************************************ consensus_9745#0 CCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGG 480 consensus_9745#2 CCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGG 415 consensus_9745#1 CCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGG 306 ************************************************************ consensus_9745#0 AAACTATCTTTCCCGTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGC 540 consensus_9745#2 AAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGC 475 consensus_9745#1 AAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGC 366 ************************** ********************************* consensus_9745#0 ACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGA 600 consensus_9745#2 ACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGA 535 consensus_9745#1 ACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGA 426 ************************************************************ consensus_9745#0 GAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAG-CTGATGATTTTGCTCCGT 659 consensus_9745#2 GAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAG-CTGATGATTTTGCTCCGT 594 consensus_9745#1 GAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGGCTGATGATTTTGCTCCGT 486 ***************************************** ****************** consensus_9745#0 ATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGG-CTGATGCGTAC 718 consensus_9745#2 ATTTGTCACGTCATGCTG------------------------------------------ 612 consensus_9745#1 ATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGGCTGATGCGTAC 546 ****************** consensus_9745#0 CCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCG--CCCAGCCCACCAAGCTTGTG 776 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 CCTGATGTGGGCACGAAAACTGATNGACCCCAGTTACAATTCCGGGCCAAGGCCACCAAG 606 consensus_9745#0 TTCATCCGGAACAAGGTAGTGCCGCACGGCACCAGTCACGATTCCCGCGAACGGATGATC 836 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GCTTGNTGGTTTCCATNCCGGGAACAAGGGTNAGTTGCCCGCCANCGGCAACCAGTCACC 666 consensus_9745#0 AATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACG---AGCGCCAGC 893 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GAATTCCCGGGGAAACGGATGATCAATCTGGTACCGGGCGGGATGTTTCTTAACGTTGAC 726 consensus_9745#0 TTTAGCGGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATA 953 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GTTCGGTTTTCCCGTGACGAAGCGCCCAAGGCTTTTANTCCGGTTGAACTTCCCGGAGAG 786 consensus_9745#0 GAAAAAGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGG 1013 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GCACACAGGGAGGCGCAAATTGTTTCACAC--TTTGATNTAAGCAAATNTTTCCCCCCGG 844 consensus_9745#0 CAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGG 1073 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GTTTAGAAACAAGGGNTGACAACCGGTTNAAGGCATTTCCCGGGGAACATTTTAACAGGG 904 consensus_9745#0 GGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTAC 1133 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GACANGACCCATACATTGGTCGAGCTTAACCGGGCNNATCNNGTTACCGCCTTGGNACGG 964 consensus_9745#0 GAAAAGCTGAAGGAAAAGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATAT 1193 consensus_9745#2 ------------------------------------------------------------ consensus_9745#1 GGANAGTTTAATGGGGCCGGCCAGTTGTC------------------------------- 993 consensus_9745#0 CGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAATGCATCCTCAGAAACCCC 1250 consensus_9745#2 --------------------------------------------------------- consensus_9745#1 --------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||