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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9751#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1299 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGAATCCAATTGTAAACACGTCTGTGCGAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACACAAGCCACAAT-GGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTC-TGGAAATTGAACCAAACAATCAGCAGGTGATAGCACTAG-AGGAGCTAATCAAGAAA-CGCA-T-GGACATCGAGGGGCTGAAGGGTGTGGCGAA-GGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAAACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTTTTTCCGATATGTTTTTAAAATAATTATTTCTTTAGCAACTTGTAGCTTGTTGCCGTACTGTAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCGTCAAAAAGAGAGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTACTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGTACAAAACTTTGAGAATCAATGTCACAGAGTGTCCTTGAAACAAACAGAAAAAAAACACTTCTAATCGATACTGCGTTGATAAGCGTA]
[+] EMBL BM608613 [CCGCCCACGCGTCCGCCCACGCGTCCGCGAATCCAATTGTAAACACGTCTGTGCAAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACAAAAGTCACAAT GGAGGAAATATTAAACGATTCCGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATGGGGCACACGAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTC TGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGG AGGAGCTAATCAAGAAA CGCA T GGACATCGAGGGACTGAAGGGTGTGGCGAA GGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGA ]
[+] EMBL BM627105 [ CCGCCCACGCGTCCG ATTGTAAACACGTCTGTGCGAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACACAAGCCACAAT GGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTC TGGAAATTGAACCAAACAATCAGCAGGTGATAGCACTAG AGGAGCTAATCAAGAAA CGCA T GGACATCGAGGGGCTGAAGGGTGTGGCGAA AGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACA ]
[+] EMBL BM582248 [ ccgcgaaCGAATCCAATTGTAAACACGTCTGTGCTAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACAAAAGTCACAAT GGAGGAAATATTAAACGATTCCGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACGAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTC TGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGG AGGAGCTAATCAAGAAA CGCA T GGACATCGAGGGACTGAAGGGTGTGGCGAA GGCGACCGGTGCGGCCCTTGTCGT ]
[+] EMBL AL695474 [ cccgaggTTATAAACACGTCTGTGCGAGTGCCGTAAAAGTGTAATC TTGTATCAATATTCACGAATAGCAATCACACAAGCCACAAT GGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTTGGAAATTGAACCAAACAATCAGCAGGTGATAGCACTAGAAGGAGCTAATCAAGAAACCGCACTGGGACATCGAGGGGCTGAAGGGTGTGGCGAAGGGCGACCGGTGCGGCCCTTGT ]
[+] EMBL BX606347 [ TCACACAAGCCACAATGGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTC TGGAAATTGAACCAAACAATCAGCAGGTGATAGCACTAG AGGAGCTAATCAAGAAA CGCA T GGACATCGAGGGGCTGAAGGGTGTGGCGAA GGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAAACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTT ]
[+] EMBL AL930510 [ atcgcCGAGGTTAAAACGGGACTTGTCTTACTGGAAGA CTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTC TGGAAATTGAACCAAACAATCAGCAGGTGATAGCACTAG AGGAGCTAATCAAGAAA CGCA T GGACATCGAGGGGCTGAAGGGTGTGGCGAA GGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAAACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGA ]
[+] EMBL BX623888 [ TATTCAAACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTTTTTCCGATATGTTTTTAAAATAATTATTTCTTTAGCAACTTGTAGCTTGTTGCCGTACTGTAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCGTCAAAAAGAGAGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTACTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGTACAAAACTTTGAGAATCAATGTCACAGAGTGTCCTTGAAACAAACAGAAAAAAAACACTTCTAATCGATACTGCGTTGATAAGCGTA]
[+] EMBL BX617144 [ AAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGATTATTTCAACTCTTTTTTTCCGATATGTTTTTAAAATAATTATTTCTTTAGCAACTTGTAGCTTGTTGCCGTACTGTAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCGTCAAAAAGAGGGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTACTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGTACAAAACTTTGA ]
consensusID : consensus_9751#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1204 fasta sequence
[CCGAATCTTTGTATCAATATTCACGAATAGCAATCACACAATCCACAATGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACGAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAATTTCAATTCAATTTGGTAAGGTTTTAGGTAGCGAGTAATGTAGTTTTTAATGCAAACCCATCCACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTAAATTCAACTTGTTCGGGTAATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGTGAACCGAATCAC--TGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTTTTCCGATATGTTTCTAAAATAATTATTTCTTTAGCAACTGGTAGCTTGTTGCCGTACTGTAAAACAAAAACAACCGTCTGTGTATAAGTAATAATTCCGGCACAAGCGTCAAAAAGAGAGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTACTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGT]
[+] EMBL BM613662 [CCGAATCTTTGTATCAATATTCACGAATAGCAATCACACAATCCACAATGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACGAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGTGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAACTTTGCTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAATTTCAATTCAATT ]
[+] EMBL BX623753 [ CACGAATAGCAATCACACAATCCACAATGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAATTTCAATTCAATTTGGTAAGGTTTTAGGTAGCGAGTAATGTAGTTTTTAATGCAAACCCATCCACGGTATGTGATGTAGGAGAATTCAATTACACT ]
[+] EMBL BX618172 [ GAAATATTAAACGATTCCGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACGAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGAGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGCTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAATTTCAATTCAATTTGGTAAGGTTTTAGGTAGCGAGTAATGTAGTTTTTAACGCAACCCCATCCACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTAAATTCAACTTGTTCGGGTAATTGTTTACAGAGTAGCGAATAGAAGTTT ]
[+] EMBL BM643982 [ ccgATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAATTTCAATTCAATTTGGTAAGGTTTTAGGTAGCGAGTAATGTAGTTTTTAATGCAAACCCATCCACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGTGAACCGAATCAC TGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTTTTCCGATATGTTTCTAAAATAATT ]
[+] EMBL CNS09FCI [ ATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTTGCACTGCTGAAGAAA ]
[+] EMBL BX615214 [ ACCGGGGCGGCCCTTGTCGTCGGGGGCATTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTGGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCG ]
[+] EMBL BX610218 [ AATTTGGTAAGGTTTTAGGTAGCGAGTAATGTAGTTTTTAACGCAACCCCATCCACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTAAATTCAACTTGTTCGGGTAATTGTTTACAGAGTAGCGAATAGAAGTTTCAATCTTGCTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTATCGCTTAAACCTCTTTCTGGTACAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTATTCCGATATGTTTTTAAAATAATTATTTCTTTAGCAACTGGTAGCTTGTTGCCGTACTGTAAAACAAAAACAACCGTCTGTGTATAAGTAATAATTCCGGCACAAGCGTCAAAAAGAGAGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTACTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGT]
consensusID : consensus_9751#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 876 fasta sequence
[GAGGCAGAATCGGCACGNTGGATCCAATTGTAAACACGTCTGTGCAAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACACAAGCCACAATGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACAC-AAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCC-TTGTCGTCGGTGGCA-TTCT-GGGGCTGGGGCTCGCACTGCTGAA-GAAATGAANAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGGTATTGCAAGGACCCGGAAACTTTAGTATAGTGAATGGTTTAGTTAGTGTCAAANCGGGTATGTTGATTGTAGGAGAAATNCAATTTACACCTTCCAAATTTGGGTTTTAAACTTTCCAAACCTTTGTTACCGGGGTGGAATGGTGTCTACCCGAGGTAGGCGAAAATNGAANGTTTTCCAGCNAANTCGGTTCTCNCCAGNAGCNCAATCAGACACAGATATGACACAACGAANACG]
[+] EMBL BX467901 [GAGGCAGAATCGGCACGNTGGATCCAATTGTAAACACGTCTGTGCGAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACACAAGCCACAATGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCACTAGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGGCTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCC TTGTCGTCGGTGGCA TTCT GGGGCTGGGGCTCGCACTGCTGAACGAAATGAANAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGGTATTGCAAGGACCCGGAAACTTTAGTATAGTGAATGGTTTAGTTAGTGTCAAANCGGGTATGTTGATTGTAGGAGAAATNCAATTTACACCTTCCAAATTTGGGTTTTAAACTTTCCAAACCTTTGTTACCGGGGTGGAATGGTGTCTACCCGAGGTAGGCGAAAATNGAANGTTTTCCAGCNAANTCGGTTCTCNCCAGNAGCNCAATCAGACACAGATATGACACAACGAANACG]
[+] EMBL BM585718 [ ccgTCCAATTGTAAACACGTCTGTGCAAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACACAATCCACAATGGAGGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACAC AAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCC TTGTCGTCGGTGGCA TTCT GGGGCTGGGGCTCGCACTGCTGAA GAAATG ]
[+] EMBL BM615965 [ ccgGTGCAAGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACAAAAGTCACAATGGAGGAAATATTAAACGATTCCGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACAC GAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTTGTCGTCGGTGGCATTTCTGGGGGCTGGGGCTCGCACTGCTGAA GAAATGAA ]
[+] EMBL BM643358 [ ccgGTGCCGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACAAAAGTCACAATGGAGGAAATATTAAACGATTCCGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACAC GAGGCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCGACCGGTGCGGCCC TTGTCGTCGGTGGCA TTCT GGGGCTGGGGCTCGCACTGCTGAA GAAATGAA AATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGA ]
consensusID : consensus_9751#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence
[CCGCGGACGCGTGGGTTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAAACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTTTTTCCGATATGTTTTTAAAATAATTATTTCTTTAGCAACTTGTAGCTTGTTGCCGTACTGTAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCGTCAAAAA]
[+] EMBL BM614468 [CCGCGGACGCGTGGGTTCTGGGGCTGGGGCTCGCACTGCTGAAGAAATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCGTTTCACAACAGAAGTACACAGAGCTTTGGTATTGCAGACCGAACTTTATATAGTGAATGGTTTGTTATTCAAACGGTATGTGATGTAGGAGAATTCAATTACACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTACAGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTTCTTTCATTTATTGAATATGCCAACGTTATTTCATTTACAAGCGTTAACGCGAACCGAATCACTGTGTTTTCCCCCGTACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCTCGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTTTTTCCGATATGTTTTTAAAATAATTATTTCTTTAGCAACTTGTAGCTTGTTGCCGTACTGTAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCGTCAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9751#1 ------------------------------------------------------------
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 CCGCCCACGCGTCCGCCCACGCGTCCGCGAATCCAATTGTAAACACGTCTGTGCGAGTGC 60
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 --------CCGAATCTTTGTATCAATATTCACGAATAGCAATCACACAATCCACAATGGA 52
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 CGTAAAAGTGTAATCTTTGTATCAATATTCACGAATAGCAATCACACAAGCCACAATGGA 120
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 GGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAGTTCGAGAAAAAGTACAA 112
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 GGAAATATTAAACGATTCTGTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAA 180
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 CGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCAT 172
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 CGAAGAGCTCAAAAATGGAGCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCAT 240
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 GGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCCTACTGGAAGACCTGTT 232
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 GGTACGAAGCGACTTTGCCAGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTT 300
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 CGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACGAG 292
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 CGTGAAGCATCCGGAAGGACGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAG 360
consensus_9751#2 --------------------------------------------------GAGGCAGAAT 10
consensus_9751#1 GCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAA 352
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 GCTAAAGGAGTACTCGGAGGCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAA 420
consensus_9751#2 CGGCACGNTGGATCCAATTGTAAACACGTCTGTGCAAGTGCCGTAAAAGTGTAATCTTTG 70
consensus_9751#1 CAATCAGCAGGTGATAGCGCTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACT 412
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 CAATCAGCAGGTGATAGCACTAGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGGCT 480
consensus_9751#2 TATCAATATTCACGAATAGCAATCACACAAGCCACAATGGAGGAAATATTAAACGATTCT 130
consensus_9751#1 GAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGG 472
consensus_9751#3 --------------------------------CCGCGGACGCGTGGGTTCTGGGGCTGGG 28
consensus_9751#0 GAAGGGTGTGGCGAAGGCGACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGG 540
consensus_9751#2 GTTGTGAACGATGAGCTGGAGAAATTCGAGAAAAAGTACAACGAAGAGCTCAAAAATGGA 190
***
consensus_9751#1 GCTCGCACTGCTGAAGAA--ATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTC 530
consensus_9751#3 GCTCGCACTGCTGAAGAA--ATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTC 86
consensus_9751#0 GCTCGCACTGCTGAAGAA--ATGAAAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTC 598
consensus_9751#2 GCCGTCTCAACCAACACACAGTTCGAGTACGCATACTGCATGGTACGAAGCGACTTTGCC 250
** * * * * * * * * * ** * ** **** ** *
consensus_9751#1 GG-GCTGTCGGGCTTGTGCGTTTCACAACAGAAG-----TACACAGAGCTTTGGTATTGC 584
consensus_9751#3 GG-GCTGTCGGGCTTGTGCGTTTCACAACAGAAG-----TACACAGAGCTTTGGTATTGC 140
consensus_9751#0 GG-GCTGTCGGGCTTGTGCGTTTCACAACAGAAG-----TACACAGAGCTTTGGTATTGC 652
consensus_9751#2 AGCGATATGAAAACGGGACTTGTCTTACTGGAAGACCTGTTCGTGAAGCATCCGGAAGGA 310
* * * * * * * ** * **** * * *** * * * *
consensus_9751#1 AGACCGAACTTTATATAGTGAATGG---TTTGTTATTCAATTTCAATTCAATTTGGTAAG 641
consensus_9751#3 AGACCGAACTTTATATAGTGAATGG---TTTGTTATTCAA-------------------- 177
consensus_9751#0 AGACCGAACTTTATATAGTGAATGG---TTTGTTATTCAA-------------------- 689
consensus_9751#2 CGTCGCGACTATCTGTACTACATGGCAATTGGGCACACAAGGCTAAAGGAGTACTCGGAG 370
* * *** * * ** * **** ** * * ***
consensus_9751#1 GTTTTAGGTAGCGAGTAATGTAGTTTTTAATGCAAACCCATCCA-CGGTATGTGAT---G 697
consensus_9751#3 -------------------------------------------A-CGGTATGTGAT---G 190
consensus_9751#0 -------------------------------------------A-CGGTATGTGAT---G 702
consensus_9751#2 GCGCTGAAGCACGCGCAGGCCTTTCTGGAAATTGAACCAAACAATCAGCAGGTGATAGCG 430
* * * * ***** *
consensus_9751#1 TAGGAGAATTCAATTAC--ACTCAATTGGTTAAATTCAACTTGTTCGGGTAATTGTTTAC 755
consensus_9751#3 TAGGAGAATTCAATTAC--ACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTAC 248
consensus_9751#0 TAGGAGAATTCAATTAC--ACTCAATTGGTTTAATTCAACTTGTTCGGGTGATTGTTTAC 760
consensus_9751#2 CTGGAGGAGCTAATCAAGAAACGCATGGACATCGAGGGACTGAAGGGTGTGGCGAAGGCG 490
**** * *** * * ** * *** * **
consensus_9751#1 AGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTT---CTTTCATTTATTGAATAT 812
consensus_9751#3 AGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTT---CTTTCATTTATTGAATAT 305
consensus_9751#0 AGAGTAGCGAATAGAAGTTTCAATATTGTTTCAATTCTT---CTTTCATTTATTGAATAT 817
consensus_9751#2 ACCGGTGCGGCCCTTGTCGTCGGTGGCATTCTGGGGCTGGGGCTCGCACT-GCTGAAGAA 549
* * *** ** * ** ** ** ** * **** *
consensus_9751#1 GCCAACGTTATTTCATTTACAAGCGTTAACGTGAAC----CGAATCACTG--TTTTCCCC 866
consensus_9751#3 GCCAACGTTATTTCATTTACAAGCGTTAACGCGAAC----CGAATCACTGTGTTTTCCCC 361
consensus_9751#0 GCCAACGTTATTTCATTTACAAGCGTTAACGCGAAC----CGAATCACTGTGTTTTCCCC 873
consensus_9751#2 ATGAANAATCACCTCGCTAAGCCCTCCGGCGCGATCGTGTCGGGCTGTCGGGCTTGTGCG 609
** * ** * ** ** * ** * ** *
consensus_9751#1 CGT----ACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCT 922
consensus_9751#3 CGT----ACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCT 417
consensus_9751#0 CGT----ACACACTTGTGTCAACAATGAGGCAGCTAACTAATGCCAGTCTTTCAATCTCT 929
consensus_9751#2 TTTCACAACAGAAGTACACAGAGCTTTGGGTATTGCAAGGACCCGGAAACTTTAGTATAG 669
* *** * * * * ** * * * * ** * * *
consensus_9751#1 CGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTT 982
consensus_9751#3 CGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTT 477
consensus_9751#0 CGCTTAAACCTCTTTCTGGAATAGCATAAATGTGTTTCCGTGGCTTATTTCAACTCTTTT 989
consensus_9751#2 TGAATGGTTTAGTTAGTGTCAAANCGGGTATGTTGATTGTAGGAGAAATNCAATTTACAC 729
* * ** ** * * * **** * ** * * *** *
consensus_9751#1 TT-CCGATAT--GTTTCTAAAATAATTATTTCTTTAGCAACTGG-TAGCTTGTTGCCGTA 1038
consensus_9751#3 TTTCCGATAT--GTTTTTAAAATAATTATTTCTTTAGCAACTTG-TAGCTTGTTGCCGTA 534
consensus_9751#0 TTTCCGATAT--GTTTTTAAAATAATTATTTCTTTAGCAACTTG-TAGCTTGTTGCCGTA 1046
consensus_9751#2 CTTCCAAATTTGGGTTTTAAACTTTCCAAACCTTTGTTACCGGGGTGGAATGGTGTCTAC 789
* ** * * * ** **** * * **** * * * * * ** ** *
consensus_9751#1 CTG---TAAAACAAAAACAACCGTCTGTGTATAAGTAATAATTCCGGCACAAGCG---TC 1092
consensus_9751#3 CTG---TAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCG---TC 588
consensus_9751#0 CTG---TAAAACAAAAACAAACGTCTGTGTATAAATAATAATTCCGGCACAAGCG---TC 1100
consensus_9751#2 CCGAGGTAGGCGAAAATNGAANGTTTTCCAGCNAANTCGGTTCTCNCCAGNAGCNCAATC 849
* * ** **** * ** * * * * ** *** **
consensus_9751#1 AAAAAGAGAGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTA 1152
consensus_9751#3 AAAAA------------------------------------------------------- 593
consensus_9751#0 AAAAAGAGAGAGTCTTGAAAATGAATGTATCAAATAGATTGTTTGTTAGTGGTAAGGCTA 1160
consensus_9751#2 AGACACAGATATGACACAACGAANACG--------------------------------- 876
* * *
consensus_9751#1 CTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGT-------- 1204
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 CTATTTGTAATCGGAATGAAGGTACAGTGAGTAGATTTATCTCTAGCACTGTACAAAACT 1220
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 ------------------------------------------------------------
consensus_9751#3 ------------------------------------------------------------
consensus_9751#0 TTGAGAATCAATGTCACAGAGTGTCCTTGAAACAAACAGAAAAAAAACACTTCTAATCGA 1280
consensus_9751#2 ------------------------------------------------------------
consensus_9751#1 -------------------
consensus_9751#3 -------------------
consensus_9751#0 TACTGCGTTGATAAGCGTA 1299
consensus_9751#2 -------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||