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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9753#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1406 fasta sequence
[CCCCGAGGTTATCGTTCGTTTACATTTGTCCATTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG-TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATACG-TG-TCGAATGGCTACAGTGGATAG-CGTATACAACGAACATTGT--ATATTAA-AATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGA-AAGGGAAAG-AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCG-GCATGCTGCATGTGAGCG-GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC-AAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGTGTTGAAATTTTTGGAAAACAATTATTTTGGAATTGTGATAAACCAACAGCAACGATAGGCGATTTAAAAAATCTTTTGTTTCATTATATGTTTCTTTCGTTTGTTTGTTTTAAATTAAGCATCATTCTACGCGCCCATTAAATTCATCAAAATTAGTAACTAAATCTACTCAAATAATGAACATGCTCTCAACTTTAAAGGCAGCGTGTATGTGTGTGTTGTTGTTGTTGCATCGTGAACGTTTTTTTCGCACCAACGGGTGCCGTAAGGTAAAATTGTGAGTGGAAACAGAAACAAGAACAATCGGATAATAATAAACATGCCTCAAGCAATTGTGACACGGCGGAAAA]
[+] EMBL AL693130 [CCCCGAGGTTATCGTTCGTTTACATTTGTCCATTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTC TTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGCAAAAAAA ACACACACACATATACATACACATACGTTGCTCGAATGGCTACAGTGGATGGCCGTATACAACGAACATTGTCNCTATTAACCATAACACTAAATTGTCGCACGCACAATTAGATAAATGTACGACAAGGGAAAGCAAGGGTGATAG AAAGCGTCCCGATGAAACGAAG TAGAc ]
[+] EMBL CNS09HK5 [ CATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATACG TG TCGAATGGCTACAGTGGATAG CGTATACAACGAACATTGT ATATTAA AAT ]
[+] EMBL CNS09G63 [ GGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTACTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAA ]
[+] EMBL CNS09ENJ [ AAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATAC ]
[+] EMBL BX607596 [ CCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATACG TG TCGAATGGCTACAGTGGATAG CGTATACAACGAACATTGT ATATTAA AATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGA AAGGGAAAG AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGCACACGCGTGGGCAAAGAAGCG GCATGCTGCATGTGAGCG GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC AAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGTGTTGAAATTTTTGGAAAACAATTATTTTGGAATTGTGATAAACCAACAGCAACGA ]
[-] EMBL CNS09ENK [ aTTACTTAAGGGGTTACGACAGAAAAAAAAAAAAAAAACACATATA AAAAACATACG TG TCGAATGGCTACAGTGGATAG CGTATACAACGAACATTGT ATATTAA AATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGA AAGGGAAAG AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTTGAACACGCGTGGGCAAAGAAGCG GCATGCTGCATGTGAGCGCGTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAAACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC AAAAAAAACCCTGTATTATTC ]
[-] EMBL CNS09G64 [ AAGA AAGGGAAAG AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCGCGCATGCTGCATGTGAGCG GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC AAAAAAAACCCTGTATTATTCGATTTACTCATAAACGGTG ]
[-] EMBL CNS09HK6 [ GTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCG GCATGCTGCATGTGAGCG GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGACAAAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGTGTGGAAATTTTTGGAAAACAATTATTTTGGAATTGTGATAAACCAACAGCAACGATAGGCGATTTAAAAAATCTTTTGTTTCATTATATGTTTCTTTCGTTTGTTTGTTTTAAATTAAGCATCATTCTACGCGCCCATTAAATTCATCAAAATTAGTAACTAAATCTACTCAAATAATGAACATGCTCTCAACTTTAAAGGCAGCGTGTATGTGTGTGTTGTTGTTGTTGCATCGTGAACGTTTTTTTCGCACCAACGGGTGCCGTAAGGTAAAATTGTGAGTGGAAACAGAAACAAGAACAATCGGATAATAATAAACATGCCTCAAGCAATTGTGACACGGCGGAAAA]
consensusID : consensus_9753#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1388 fasta sequence
[CCGCCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA-GGGGCA-GGG-TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC-GGATACAGAT-GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT-CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGT-AAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAGACAGCAGTCCGTGGTATTGTGTTTCGCAACGGCACAAATTCGCTTAAAATCTTTTGATCTTTTTTTATCGAAATGAGGTAAAATCGTAAAATCAACCTATTAACGGTGTCACTCGCTAAAATTCACGAGTCAAGAATTGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCATTCGTTCATTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCT]
[+] EMBL BM647402 [ CCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATTCCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGGCTTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACG ]
[+] EMBL BM615008 [ CCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAAGGGGGCA GGG TTTCCAGGAGTTTTGC ]
[+] EMBL BM596733 [ccgggaATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCAGGGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGATGGGGGGACGAGATGTCGAAGCGCAGCAAGTT ]
[+] EMBL BM593578 [ccgggaATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGATGGGGGGACGAGATGTCGAAGCG ]
[+] EMBL BM591401 [ ccgCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAG ]
[+] EMBL BM622069 [ ccgGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCCGGGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGATCCGGGCCGGAAGTCGGTGTGATGCAGC ]
[+] EMBL BM595471 [ CCG CGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT Cc ]
[+] EMBL BX623985 [ GCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGT AAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAG ]
[+] EMBL BM624989 [ ccgCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGTAAAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAGACAGCAGTCCGTGGTATTGTGTTTCGCAACGGCACAAA ]
[+] EMBL BM640460 [ GTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCTACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGG ]
[+] EMBL BM647790 [ ccgGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGTAAAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAGACAGCAGTCCGTGGTATTGTGTTTCGCAACGGCACAAATTCGCTTAAAATCTTTTGATCTTTTTTTATCGAAATGAGGTAAAATCGTAAAATCAACCTATTAACGGTGTCACTCGCTAAAATTCACGAGTCAAGAATTGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCATTCGTTCATTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCT]
consensusID : consensus_9753#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 303 fasta sequence
[CCCCGAGGTTAAATCACGAGTCAGAATGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCGTTCGTTCGTTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACAACAAAAAAAAAAAAAAAA]
[+] EMBL AL713821 [CCCCGAGGTTAAATCACGAGTCAGAATGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCGTTCGTTCGTTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACAACAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9753#0 ------------------------------------------------------------
consensus_9753#2 CCCCGAGGTTAAATCACGAGTCAGAATGAGTGACACACATGCATGAGTTTTACTATAGAC 60
consensus_9753#1 ------------------------------------------------------------
consensus_9753#0 CCCCGAGGTTATCGTTCGTTTACATTTGTCCATTT-G---ACTGATTAAT--TTGTATTA 54
consensus_9753#2 TTTCGGCTCGTTCGTTCGTTTACATTTGTCCATTTTG---ACTGATTAAT--TTGTATTA 115
consensus_9753#1 CCGCCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTG 60
* * * * * *** * * * * * ** * * **
consensus_9753#0 CATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTAT-TTGTGCAATCAATTTTAGC 113
consensus_9753#2 CATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTAT-TTGTGCAATCAATTTTAGC 174
consensus_9753#1 CATTATCCTCCCGT--GTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGT 118
*** * ** * ** * **** * * ***** * * * *
consensus_9753#0 TCATCCTC-TCGCTATCGCCA-ATAGGATATCGGAATTGGTATCGTCTCGTGTTTTTTTT 171
consensus_9753#2 TCATCCTCCTCGCTATCGCCA-ATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTT 233
consensus_9753#1 T--TTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTAT-TGATGCTGAAGGC 175
* * * * * * * * ** * * * * * ** * * ** *
consensus_9753#0 CTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGG 231
consensus_9753#2 CTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACA-ACAAAAA 292
consensus_9753#1 GAAGAACGTAGGGA-AGCACTGGTGCTAGTTTGAGTAAATTGAATC-TGGCGGA---AGG 230
* ** * * * ** ** **** ** * ** * * *
consensus_9753#0 TTTCATA----CTTACTGCTGTGT--ATTTGTTTTTCGTGTTTATTGCGAACGGCATAAT 285
consensus_9753#2 AAAAAAA----AAAA--------------------------------------------- 303
consensus_9753#1 TTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTA-AAGTTGCGTGGC 289
* * *
consensus_9753#0 GCTTCTAATAGTTTGCACTCAC-CACACCTCCTTTCCATGTCTGCC-ACGGGTAAAGATC 343
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTT 349
consensus_9753#0 ACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTT-AATGCTTATCAATT 402
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGT 409
consensus_9753#0 GGCGCTCAAACTACCCACAAATCACGTTTCGTAA-ACGGCAACAGTTGCCAGTATATGTA 461
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 AGAGC--AAATGGCCGA--GAGCAAGCCTCGCAAGATGGCATTGCCCACC--TCGCTAGA 463
consensus_9753#0 TTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGC 521
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TAAGGATG--CAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACC---AC 518
consensus_9753#0 TAGCAAACTTCTATCTTACTTAAGGGGTTACGA--CAGAAAAAAAACACACACACACATA 579
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 GAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAAGGGGCAGGGT 578
consensus_9753#0 TACACACACATACGTGTCGAATGGCTACAGTGGATAGCG--TATACAACGAACATTGTAT 637
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TTCCAGGAGTTTTGCGCCCAGTTTC-ACGACGACGAGCGGGCGTTCGGCTACATCCGGAT 637
consensus_9753#0 ATTAAAATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGAAAGGGAAAGAAG 697
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 ACAGATGGGGGACGAGAT-GTCG-AAGCGCAGCAAGTTCC-TGTTCCTCACCTGGATCGG 694
consensus_9753#0 GGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCGGCA 757
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 GCCG----GAGGTCGGTGTGATGCAGCGC-GCCAAAATGTCCACCGACAAATCGAT--CA 747
consensus_9753#0 TGCTGCATGTGAGCGGTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCT 817
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TCAAGGATGTGATC---AACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATC 804
consensus_9753#0 GGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGA-ATAG 876
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTG 864
consensus_9753#0 ACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTC 936
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 GCGTGCGGGAG---CTGTAACACTACCCAGGCGGTCGTAAAAAAAAGGAGAAGCAAGG-- 919
consensus_9753#0 AGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCC 996
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 AGATGTTCGGCG------GGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGG 973
consensus_9753#0 TAAATTATGAAAACCCCTGACAAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGT 1056
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 CCGGGTTTGGC--CCTTCGACAGA------CTCACGCAACCCG--CCAACCGTGTTCGGA 1023
consensus_9753#0 GTTGAAATTT--TTGGAAAACAATTATTTTGGAATTGTGATAAACCAACA-GCAACGATA 1113
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 GATGAAATGTGATCGCGTTACGGTAACATTCAAG--ACAGCAGTCCGTGGTATTGTGTTT 1081
consensus_9753#0 GGCGATTTAAAAAATCT--TTTGTTTCATTATATGTTTCTTTCGTTTGTTTGTTTTAAAT 1171
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 CGCAACGGCACAAATTCGCTTAAAATCTTTTGATCTTTTTTTATCGAAATGAGGTAAAAT 1141
consensus_9753#0 TA-AGCATCATTCTACGCGCCCATTAAATTCATCAAAATTAGTAACTAAATCTACTCAAA 1230
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 CGTAAAATCAACCTAT-TAACGGTGTCACTCGCTAAAATTCACGAGTCAA--GAATTGAG 1198
consensus_9753#0 TAATGAACATGCTC----TCAACTTTAAAGGCAGCGTGTATGTGTGTGTTGTTGTTGTTG 1286
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 TGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCATTCGTTCATTTACATTTGTC 1258
consensus_9753#0 CATCGTGAACGTTTTTTTCGCACCAACGGGTGCCGTAAGGTAAAATTGTGAGTGGAAACA 1346
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 CATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTT 1318
consensus_9753#0 GAAACAAGAACAATCGGATAATAATAAACATGCCTCAAGCAATTGTGACACGGCGGAAAA 1406
consensus_9753#2 ------------------------------------------------------------
consensus_9753#1 GTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATT 1378
consensus_9753#0 ----------
consensus_9753#2 ----------
consensus_9753#1 GGTATCGTCT 1388
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||