These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9756#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1208 fasta sequence [CTGGTGAGATCGGATCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC-GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT-GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT-CCGAGTTTTTACACACACATACA-CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTTATGTTTCCGAGTG] [+] EMBL CNS09NQK [CTGGTGAGATCGGATCAGCTCGAACGGAGTGGCCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAGGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGGAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCTGGGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTA ] [+] EMBL BX603188 [ GTGAGATCGGATCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTC ] [+] EMBL CNS09KAO [ tTCTGAT AGCTCGAACGGAGTGTCCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATAGCCCCTAATTTTTGTGCC ] [+] EMBL BX608668 [ GATCAGCTCTAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGC ] [+] EMBL BM612653 [ ccgGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGC ] [+] EMBL BX611051 [ GGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAAC GCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAA ] [+] EMBL BX616028 [ AGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGATGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTA CCAGCAT ] [+] EMBL BM648979 [ ccgTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATC ] [+] EMBL BM655027 [ ccgGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATTCCCGAGTTTTTACACACACATACACCCACTCTAAACTACTACTGC ] [+] EMBL BX608676 [ GACATTTCGGCCGAGGAAGCGACAGATATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTACACACACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATAC ] [+] EMBL BX615635 [ CAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTACACACACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTaaa ] [+] EMBL BX617155 [ AGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTA ] [-] EMBL CNS09KAP [ TATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGAAACGCCTGTGCCGTTTACGTACAAATAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTACACACACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTTATGTTTCCGAGTG] [-] EMBL CNS09NQL [ CCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTTAAACTGTAGAAACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCACCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTAAAAAAACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAAATGTGCTGCACCCGGAATGAGCAAAACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGA ] consensusID : consensus_9756#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 660 fasta sequence [CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAACAAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAACATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTGCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGAT] [+] EMBL BM584232 [CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAACAAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAACATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTGCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGAT] [+] EMBL BM626800 [ ccgatCAGCTCGAACGGAGTGACCGCTACAAGGGAAATAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGAGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTATTTTACTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGTCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGACTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAACATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTGCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGAT ] consensusID : consensus_9756#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 613 fasta sequence [GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGTCGAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGATTTAAACGAATGTGTA] [+] EMBL AL930712 [GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGTCGAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGATTTAAACGAATGTGTA] [+] EMBL BX601653 [ TGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAA ] [+] EMBL BX611952 [ ACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAG ] [+] EMBL BX618522 [ TCGGGTATCCCGGGGCGGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9756#0 CTGGTGAGATCGGATCAG-CTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTA 59 consensus_9756#2 ---GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTA 57 consensus_9756#1 -CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTA 59 * * **************************************** consensus_9756#0 AACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGA 119 consensus_9756#2 AACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGA 117 consensus_9756#1 AACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGA 119 ******************************* **************************** consensus_9756#0 ACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACA 179 consensus_9756#2 ACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACA 177 consensus_9756#1 ACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACA 179 ************************************************************ consensus_9756#0 TCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGC 239 consensus_9756#2 TCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGC 237 consensus_9756#1 TCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGC 239 ************************************************************ consensus_9756#0 TCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCG 299 consensus_9756#2 TCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCG 297 consensus_9756#1 TCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCG 299 ************************************************************ consensus_9756#0 TGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAA 359 consensus_9756#2 TGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAA 357 consensus_9756#1 TGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAA 359 ************************************************ *********** consensus_9756#0 CAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTC 419 consensus_9756#2 CAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTC 417 consensus_9756#1 CAAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTC 419 ********* *********************************** ************** consensus_9756#0 GGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAA 479 consensus_9756#2 GGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAA 477 consensus_9756#1 GGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAA 479 *************************************************** ******** consensus_9756#0 CATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGT 539 consensus_9756#2 CATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGT 537 consensus_9756#1 CATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGT 539 ************* ********************************** **** ****** consensus_9756#0 -GAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGA-TGGAACGATAACGATTGAG-GA 596 consensus_9756#2 CGAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGA 597 consensus_9756#1 -GCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGA-TGGAACGATAACGATCGAG-GA 596 * ********************************** *************** *** ** consensus_9756#0 TTTAAA-GAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGG 655 consensus_9756#2 TTTAAACGAATGTGTA-------------------------------------------- 613 consensus_9756#1 TTTAAA-GAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGG 655 ****** ********* consensus_9756#0 AGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCT 715 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 AGGAT------------------------------------------------------- 660 consensus_9756#0 CCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGG 775 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 ATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTT 835 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 TACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGC 895 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 ATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATTCCGAGTTTT 955 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 TACACACACATACACCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAG 1015 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 ATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCA 1075 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 GCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTG 1135 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 TTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTT 1195 consensus_9756#2 ------------------------------------------------------------ consensus_9756#1 ------------------------------------------------------------ consensus_9756#0 ATGTTTCCGAGTG 1208 consensus_9756#2 ------------- consensus_9756#1 ------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||