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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9758#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1687 fasta sequence
[TCAGCACAACAGCAACAATAACAATGATCGTGCTTGTTTACCTTTCGCAACATTTTTGTGATAAGAAGATATTCTGATAAGTTTATGCGTAGATTAGC-AAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAG-AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTG-GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA-CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC-ACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCG-CCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTG-GGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGC-AC-CGCAGAAGCCA-CCGGTCCACAGCAAACCGGTGGAATTGATTGGC-CCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCTTTGGTCGTGAAGCTTCCCAGAGCGGC-GGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA-CACTCCTTTTGGGACATTTTCTCAAACTTTGGCCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCGCCGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGCTAGTGCTTCGTCCGCTCCGTCCGCATGTCCGCTAGATCTT-CCGCC--AGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGAAAA-CTA-G-TAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGACATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGCTTTTACACAATAAACTCCGTACAAGAGT]
[+] EMBL CNS08T1E [TCAGCACAACAGCAACAATAACAATGATCGTGCTTGTTTACCTTTCGCAACATTTTTGTGATAAGAAGATATTCTGATAAGTTTATGCGTAGATTAGC AAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAG AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGACGGTG GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC ACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGCCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCG CCCCACCTGCGCTACACCTGCCGGCTGGACTAC ]
[+] EMBL CNS08FHB [ TGTTTA CTTTCGCAACATTTTTGTGATAAGAAGATATTCTGATAAGTTTATGCGTAGATTAGC AAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAG AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTG GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC ACAGCGGGG ]
[+] EMBL CNS08Y05 [ TTCGCAACATTTTTGTGATAAGAAGATATTCTGATAAGTTTATGCGTAGATTAGC AAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAGCAGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTG GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGA CCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC ACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATAC ]
[+] EMBL CNS08SSY [ TTTTGTGATAAGAAGATATTCTGATAAGTTTATGCGTAGATTAGC AAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAG AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTG GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA CCCGCTGCCTGCTGGATCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGCAACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAACTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACG AGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCG CCCCACCTGCGCTACA ]
[+] EMBL BX603312 [ AGATATTCTGATAAGTTTATGCGTAGATTAGC AAATACTACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCC AGTGTGATACAATAGTGCCGTGCCCGAG AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTG GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGACCCCGCTGCCTGCTGGACCTGTGGCAAAag ]
[+] EMBL CNS096G6 [ CTGATAAGTTTATGCGTAGATTAGCAAAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAG AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTGAGTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTTTACCAATCCGAATCCGA CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC ACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCG ]
[+] EMBL BX626466 [ AGTGTGATTCAATAGTGNCGCGCCCGAG AGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTG GTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC ACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGANGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGA ]
[+] EMBL BM580503 [ ccgCGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGA CCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAACCCATCAGTGTAAGCGCGAGCCGAACCTGGCCGAACTGCAATGCGTGCTCGGTTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGC ACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGGCAGCCCGC ]
[-] EMBL CNS08T1F [ CACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGCCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCG CCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTG GGCTTGGAGGTGGGCGGGCGCGAGTTGCCAGC AC CGCAGAAGCCA CCGGTCCACAGCAAACCGGTGGAATTGATTGGC CCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCTTTGGTCGTGAAGCTTCCCAGAGCGGC GGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA CACTCCTTTTGGGACATTTTCTCAAACTTTGGCCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCGCCGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGCTAGTGCTTCGTCCGCTCCGTCCGCATGTCCGCTAGATCTT CCGCC AGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGAAAA CTA G TAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGACATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGCTTTTACACAATAAACTCCGTACAAGAGT]
[-] EMBL CNS08SSZ [ TGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAACTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCG CCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTG GGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGCAACACGCAGAAGCCA CCGGTCCACAGCAAACCGGTGGAATTGATTGGC CCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCTTTGGTCGTGAAGCTTCCCAGAGCGGC GGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA CACTCCTTTTGGGACATAATCTCAAACTTTGGCCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCGCCGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGCTAGTGCTTCGTCCGCTCCGTCCGCATGTCCGCTAGATCTT CCGCC AGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGAAAA CTA G TAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGACATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGC TTTACACAATAAA ]
[+] EMBL BM612523 [ ccgCATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCG CCCCACCTGCGCTATACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTG GGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGC AC CGCAGAAGCCA CCGGTCCACAGCAAACCGGTGGAATTGATTGGC CCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCGTTGGTCGTGAAGCTTCCTAGCGCGCCAGAAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA CACTCCTTTTGGGACATTTTCTCAAACTTTGGCCACAAAAAGGACAAACTGAACGGGAGCACCTCGCAG ]
[-] EMBL CNS08Y06 [ GTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCGCCCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTA GGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGC AC CGCAGAAGCCA CCGGTCCACAGCAAACCGGTGGAATTGATTGGC CCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCTTTGGTCGTGAAGCTTCCCAGAGCGGC GGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA CACTCCTTTTGGGACATTTTTTCAAACTTTGGCCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCGCCGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGCTAGTGCTTCGTCCGCTCCGTCCGCATGTCCGCTAGATCTT CCGCC AGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGAAAA CTA G TAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGACATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGt ]
[+] EMBL BX613367 [ TGCGTGTACGATCGGTGCGAGCTTCCG CCCCACCTGCGCTATACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTG GGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGC AC CGCAGAAGCCA CCGGTCCACAGCAAACCGGTGGAATTGATTGGC CCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCGTTGGTCGTGAAGCTTCCTAGCGCGCC AGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA CACTCCTTTTGGGACATTTTCTCAAACTTTGGCCACAAAAAGGACAAACTGAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCGTTACCCAGCCAGAAGAAGGTGGGCTCTTCGCCGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCCCCGCTGCAAGTGCTTCGTCCGCTCCGTCCGAATATCCGCTAGATCTT CCGCC AGTGATGAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGCAAG CTA GCTAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGGCATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGCTTTTACACAAT ]
[-] EMBL CNS08FHC [ GCCGAATCGATACGCGATACGCCCCGGAAGGTGTGGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGC AC CGCAGAAGCCATCCGGTCCACAGCAAACCGGTGGAATTGATTGGCTCCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCCGCCCCCTTTGGTCGTGAAGCTTCCCAGAGCGGC GGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCA CACTCCTTTTGGGACATTTTCTCAAACTTTGGCCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCG CGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGCTAGTGCTTCGTCCGCTCCGTCCGCATGTCCGCTAGATCTT CCGCC AGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGAAAA CTA G TAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGACATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGC TTTACACAATAAA TCCGTAAAAacaa]
[-] EMBL CNS096G7 [ CCTTAAAAAATCATCACTCCTTTTGGGACATTTTCTCAAACTTTGACCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCTAAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCG CGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGTTAGTGCTTCGTCCGCTCCGTCCGCATGTCCGCTAGATCTTCCCGCCCGAGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGAAAACCTACT TAGCGCTGTGTAAA ]
[+] EMBL BM590418 [ TTCGCCGTTGGCACTGATCAGGCGCGATAAAAAGCAGCCCCCCGCTGCAAGTGCTTCGTCCGCTCCGTCCGAATATCCGCTAGATCTT CCGCC AGTGATGAAGCCAGTGAAGTCGAAAAAGAAGTGGTATAAGCCGGGCAGCCGCAAG CTA GCTAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACGATGGCATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATACACATTGCTTTTACACAAT ]
consensusID : consensus_9758#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[GCAGAATCGCCACGAGGTAATGCGTAGATTAGCAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAGAGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTGGTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGACCGTGCTGCTGGACCTGTGGCAAAGCGAAACCATCAGTGTAAGCGCGAGCCGAACCTGGCGAACTGCAATGCGTGCTCGGTCTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAACCGTGCTGGCACACAAGCGGGGGGCGCGGAAACGGAAGCGACCGAATCGAAGGTCAGCGCCGGATAGCGACATTATCACAGCGGGACGATACGTCAGAACACAAGCAGCAGTTACCGATGCGTTCATCCTGTTCGCCG]
[+] EMBL AL696965 [GCAGAATCGCCACGAGGTAATGCGTAGATTAGCAATACCACCTACCCGTTAGTGCAATAATTGACGCAAAGTCACCCCTAGTGTGATTCAATAGTGCCGTGCCCGAGAGCATCATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCGGTGGTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAATCACAAACGAATATTCACGTCCGAGGATGGCTACTTTCGTGACTGGCGCGGTGTGTTCGATGTCATTGGCATTCCCAAAAGCTTCCTACCGCTGGTGTCTACCAATCCGAATCCGACCGTGCTGCTGGACCTGTGGCAAAGCGAAACCATCAGTGTAAGCGCGAGCCGAACCTGGCGAACTGCAATGCGTGCTCGGTCTGTATCGACCGTTGGGATATACTGGACGACACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAACCGTGCTGGCACACAAGCGGGGGGCGCGGAAACGGAAGCGACCGAATCGAAGGTCAGCGCCGGATAGCGACATTATCACAGCGGGACGATACGTCAGAACACAAGCAGCAGTTACCGATGCGTTCATCCTGTTCGCCG]
consensusID : consensus_9758#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 626 fasta sequence
[CCGCCCACGCGTCCGACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGCACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCGCCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTGGGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGCACCGCAGAAGCC]
[+] EMBL BM601290 [CCGCCCACGCGTCCGACTTCCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGCACAGCGGGGGCGCGAAACGGAAGCGACCGAATCGAAGGTCAGCGCGGATAGCGACATTATCACGCGGGACGATACGTCAGACCACAAGCAGCAGTACGATGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCGCCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTTTTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTGGGCTTGGAGGTGAGCGGGCGCGAGTTGCCAGCACCGCAGAAGCC]
consensusID : consensus_9758#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 229 fasta sequence
[AATTTGTTCGCGTGTGCGGTGAGCGCGCTTCTGCGCACTACTATCTTAATCGGTTTTGATTTCTTTGCCAACACAAGATAAGCAGTAGTTCGGTCAATTAGTACTCTTGTACGGAGTTTATTGTGTAAAAGCAATGTGTATATGTGAAAATAAAATACAGAACATACCCGTACAATACGGTGTCACAGAAAAAAAAAAAAAAAAAAAAGGCACATGTGCTCGGCTGCTG]
[+] EMBL CNS08OET [AATTTGTTCGCGTGTGCGGTGAGCGCGCTTCTGCGCACTACTATCTTAATCGGTTTTGATTTCTTTGCCAACACAAGATAAGCAGTAGTTCGGTCAATTAGTACTCTTGTACGGAGTTTATTGTGTAAAAGCAATGTGTATATGTGAAAATAAAATACAGAACATACCCGTACAATACGGTGTCACAGAAAAAAAAAAAAAAAAAAAAGGCACATGTGCTCGGCTGCTG]
[-] EMBL CNS08OEU [ CCAACACAAGATAAGCAGTAGTTCGGTCAATTAGTACTCTTGTACGGAGTTTATTGTGTAAAAGCAATGTGTATATGTGAAAATAAAATACAGAACATACCCGTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9758#0 TCAGCACAACAGCAACAATAACAATGATCGTGCTTGTTTACCTTTCGCAACATTTTTGTG 60
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 ATAAGAAGATATTCTGATAAGTTTATGCGTAGATTAGCAAATACCACCTACCCGTTAGTG 120
consensus_9758#1 ----GCAGA-ATCGCCACGAGGTAATGCGTAGATTAGCAA-TACCACCTACCCGTTAGTG 54
consensus_9758#2 ------------------------CCGCCCACGCGTCCGA---CTTCCAAAATGTTTGAG 33
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 CAATAATTGACGCAAAGTCACCCCTAGTGTGATT-CAATAGTGCCGTGCCCGAGAGCATC 179
consensus_9758#1 CAATAATTGACGCAAAGTCACCCCTAGTGTGATT-CAATAGTGCCGTGCCCGAGAGCATC 113
consensus_9758#2 CG-----TGATGCAGAACAGTTTCTACTGCGGGAGCAAAAGCGTGCTGCACAGCGGGGGC 88
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 ATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCG 239
consensus_9758#1 ATGTTGGATAATCCCGTAAAACCGACGGAGGTCAGCGTGAAGAATCGGATCGATTTGGCG 173
consensus_9758#2 GCGAAACGGAAGCGACCGAATC----GAAGGTCAGCGCGGATAGCGACATTATCACGCGG 144
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GTGGTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAAT 299
consensus_9758#1 GTGGTTCCCCTGGAAGCTTTAAGCTCACGGACACGGGAGTTGGTAGCCGAGTTGCTGAAT 233
consensus_9758#2 GACGATACGTCAGA--CCACAAGCAGCAGTACG-ATGCGTT--CATCCTGTTCGCCGACG 199
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 CACAAACGAATATTCACGTCCGAG--GATGGCTACTTTCGTGACTGGCGCGGTGTGTTCG 357
consensus_9758#1 CACAAACGAATATTCACGTCCGAG--GATGGCTACTTTCGTGACTGGCGCGGTGTGTTCG 291
consensus_9758#2 CAGACATAGA-ATTTGCCTCGAAAATGGTGGACAAGCTGGAGGCGCGCGGGCTGCAG-CT 257
consensus_9758#3 ---------------------------------AATTTGTTCGCGTGTGCGGTG-AGCGC 26
* * * * * * **
consensus_9758#0 ATGTCATTGGCATTCCCAAAAGCTTCCT---ACCGCTGGTG--TCTACCAATCCGAATCC 412
consensus_9758#1 ATGTCATTGGCATTCCCAAAAGCTTCCT---ACCGCTGGTG--TCTACCAATCCGAATCC 346
consensus_9758#2 ATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTTTG--AGCACGAAGTCATTTCC 315
consensus_9758#3 GCTTCTGCGCACTACTATCTTAATCGGTTTTGATTTCTTTGCCAACACAAGATAAGCAGT 86
* * * * * ** ** *
consensus_9758#0 GACCCGCTGCCTGCTGGACCTGTGGCAAAGCGAAAC--CCATCAGTGTAAGCGCGAGCCG 470
consensus_9758#1 GACCG--TGC-TGCTGGACCTGTGGCAAAGCGAAAC--C-ATCAGTGTAAGCGCGAGCCG 400
consensus_9758#2 CGCCT----CATATCGGAACGCTGCCGGCGCGTGGTGGTGATCATTTCCAAAGCCTTCCT 371
consensus_9758#3 AGTTCG--GTCAATTAGTACTCT---TGTACGGAGT--TTATTGTGTAAAAGCAATGTGT 139
* * * ** ** *
consensus_9758#0 AACCTGGCCGAACTGCAA-TGCGTGCTCGGT-TGTATCGACCGTTG-GGATATACTGGAC 527
consensus_9758#1 AACCTGGC-GAACTGCAA-TGCGTGCTCGGTCTGTATCGACCGTTG-GGATATACTGGAC 457
consensus_9758#2 GGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCTGCAGATAGAGCAAAA 431
consensus_9758#3 ATATGTGAAAATAAAATACAGAACATACCCGTACAATACGGTGTCACAGAAAAAAAAAAA 199
* * * ** * * *
consensus_9758#0 GACACTT----CCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAA 583
consensus_9758#1 GACACTT----CCAAAATGTTTGAGCGTGATGCAGAACAGTTTCTACTGCGGGAGCAAAA 513
consensus_9758#2 GGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCCGCCCCACCTGCGCTA 491
consensus_9758#3 AAAAAAA------AAGGCACATGTGCTCGGCTGCTG------------------------ 229
* * * *
consensus_9758#0 G-CGTGCTG----CACAGC--GGGGGCGCG-AAACGGAAGCGACCGAATCGAAGGTCAGC 635
consensus_9758#1 C-CGTGCTGGC-ACACAAGCGGGGGGCGCGGAAACGGAAGCGACCGAATCGAAGGTCAGC 571
consensus_9758#2 CACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTA-CAACTTTTGGGACAAGCTG- 549
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GC-GGATAGCGACATTATCAC-GCGGGACGATACGTCAGACCACAAGCAGCAGTA--CGA 691
consensus_9758#1 GCCGGATAGCGACATTATCACAGCGGGACGATACGTCAGAACACAAGCAGCAGTTACCGA 631
consensus_9758#2 GCCGAATCGATACGCGATACGCCCCGGAAGGTGGGCTTGGAGGTGAGCGGGCGCGA--GT 607
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TGCGTTCATCCTGTTCGCCGACGCAGACATAGAATTTGCCTCGAAAATGGTGGACAAGCT 751
consensus_9758#1 TGCGTTCATCCTGTTCGCCG---------------------------------------- 651
consensus_9758#2 TGCCAGCACCGCAGAAGCC----------------------------------------- 626
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GGAGGCGCGCGGGCTGCAGCTATGCCTGCGCGATCGTGACATACTGGGTGGAAGCAATTT 811
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TGAGCACGAAGTCATTTCCCGCCTCATATCGGAACGCTGCCGGCGCGTGGTGGTGATCAT 871
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TTCCAAAGCCTTCCTGGCCAGCCCGCTGAACGACTTCACCGTCACCTTTGCCCAGGCGCT 931
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GCAGATAGAGCAAAAGGCGCGCAAGGTGATACCGTGCGTGTACGATCGGTGCGAGCTTCC 991
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GCCCCACCTGCGCTACACCTGCCGGCTGGACTACCAGCGGTCGCAAAATCTGTACAACTT 1051
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TTGGGACAAGCTGGCCGAATCGATACGCGATACGCCCCGGAAGGTGGGCTTGGAGGTGAG 1111
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 CGGGCGCGAGTTGCCAGCACCGCAGAAGCCACCGGTCCACAGCAAACCGGTGGAATTGAT 1171
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TGGCCCACCGCAGCCGCTACCGAAGGTGGTAGTTGAGCAGCCCCCTTTGGTCGTGAAGCT 1231
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TCCCAGAGCGGCGGAGCAGGACAGTCGCACCGGAAGCCTTAAAAAATCACACTCCTTTTG 1291
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GGACATTTTCTCAAACTTTGGCCACAAAAAGGACAAACTAAACGGGAGCACCTCGCAGCT 1351
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 AAACCTAAACGAAATGGCTACCCCATTACCCAGCCCGAAGAAGGTGGGCTCTTCGCCGTT 1411
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 GGCACTGATCAGGCGCGATAAAAAGCAGCCCTCCGCTGCTAGTGCTTCGTCCGCTCCGTC 1471
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 CGCATGTCCGCTAGATCTTCCGCCAGTGATAAAGCCAGTGAAGTCGAAAAAGAAGTGGTA 1531
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 TAAGCCGGGCAGCCGAAAACTAGTAGCGCTGTGTAAATATGCCAGCAGTGCCTTTTTACG 1591
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 ATGACATCGTCTGTGACACCGTATTGTACGGGTATGTTCTGTATTTTATTTTCACATATA 1651
consensus_9758#1 ------------------------------------------------------------
consensus_9758#2 ------------------------------------------------------------
consensus_9758#3 ------------------------------------------------------------
consensus_9758#0 CACATTGCTTTTACACAATAAACTCCGTACAAGAGT 1687
consensus_9758#1 ------------------------------------
consensus_9758#2 ------------------------------------
consensus_9758#3 ------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||