These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1340 fasta sequence [CCGCTACATTTATAAAAGGACCATCAGGAGCTTATATTAAGGGAGGTTTATTTGAAACTACCAGGAAAAAATAAAAATACTTACCCATGAAGCGGTAAAATTAAATCAAATGCGTCAGCCAATGTTTACGTATAGGTTTGACGTTTGTCTGCGATAGCAAAGGGTTGCTGTACCGTTATCATTTCACCATCCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG-GTGCACGTGGAGTTCAATCGGCCCGATCGTATG-AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG-CCGGGT-GGTGGTACT--GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA-TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG--AGGAGGT-GGGTCGACGGGGCCG-C-CTGCTCGAGGGCACCATCAAGCT-GTACCAGGACTGCATCAGC-TCGCTGGAGCACTGCTACAAGCCGGT-CATCGTGGCGGTACATTCGGCTTG-CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT-GG-TTCTCGC-TGAAGGAGGTGGACATCGGGC-TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTGATGGTACCGACGAGGGCCTCG] [+] EMBL BM612923 [CCGCTACATTTATAAAAGGACCATCAGGAGCTTATATTAAGGGAGGTTTATTTGAAACTACCAGGAAAAAATAAAAATACTTACCCATGAAGCGGTAAAATTAAATCAAATGCGTCAGCCAATGTTTACGTATAGGTTTGACGTTTGTCTGCGATAGCAAAGGGTTGCTGTACCGTTATCATTTCACCATCCTCTTCCCTCTCGGTTGATACACGGATCAGCTGATTCGAACCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTG ] [+] EMBL CNS09P0N [ CGTTATCATTTCACCATCCTCTCCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAGCCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCCGTTTCATTTGCCACCATGAACAAACTTGCATTTAGTGCCGTTTTTTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACAAATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAAACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTCGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGCGCCATCG AGGAGGT GGGTCAACGAGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCTGGG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGA CTTGCCTTTACCGCGCGGAAGTTCGCTAGTGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACGAAGAAAAACATCGTCTACTCGGCGGACCACACGG ] [+] EMBL BM596672 [ ccgCGTTATCATTTCACCATCCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTGCCGTTTTTTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGACCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAAACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTCGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATTAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGTTTG CATCGGGGCC ] [+] EMBL CNS08CQR [ CCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCTTCGTTGCTCTTCGTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAA ] [+] EMBL BM600369 [ ccgCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAAGAGGTGGACATCGGGC TGGCG ] [+] EMBL CNS08Z0R [ TTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGGGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGA ] [+] EMBL BM589998 [ ccgCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGC ] [+] EMBL BM596842 [ cCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCGA AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGTCCATCGTGGCGGTACATTCCGCTTGACATCGGGGCCGGCCTTAACCTGATTA ] [+] EMBL BM608946 [ ccgGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCCGGGTGGGTGGTACTG GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCGA AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGCTTGAAGGAGGTGGACATCGGGCTTGGCGGgc ] [+] EMBL CNS08PBF [ ATACACGGTTCAGCTGATTCGAACCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGAAAGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GGTTTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGAC ] [+] EMBL BM576789 [ ccgCACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCCGGGTGGGTGG ACTTGGTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATATTGATGAAGCTGGGCCAGGAGATGGGAGCCATCGGAAGGAGGTCGGGTCGACGGGGCCGCC CTACTCGAGGGCACCATCAAGCTGGTACCAG ] [+] EMBL AL929915 [ cgaggttaATTCGAA CATCGTTGCTCTCCCTACGGATCAAAGTTCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTGNTTGCACGTGGAGTTCAATCGGCCCGATCGTATGTAACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGGTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCG CGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGCNTCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGATGACGTGCGGTACTGCACGCGGGACGCCT ] [+] EMBL AL930288 [ ccgaggttnATC AAGTCCAGCATT AAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG CGCTACTCGAGGGCACC ] [+] EMBL BX622573 [ AGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGANGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCc ] [-] EMBL CNS08PBG [ TGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAAAAACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGAACGGAGATCAAGAACTGCTTCGACCAGCTGAACAACGATCCCAACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGTACTTTTTCAGC TCGCTGGAGAACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGAACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTGAT GTACCGACGAG ] [-] EMBL CNS08CQS [ ATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGAACTGCTTCGACCAGCTGCACAACGATCCCAACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGAACTGCATCAGC TCGCTGGAGAACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCA CGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCC ] [-] EMBL CNS09P0O [ AGAACAACTTCAAAAAACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTCGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGAACTGCTTCGACCAGCTGAACAACGATCCCAACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGCGCCATCG AGGAGGT GGGTCAACGAGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGAACTGCATCAGC TCGCTGGAGAACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGAACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGGGCTTGCCTTTACCGCGCGGAAGTTCGCTAGTGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACGAAGAAAAACATCGTCTACTCGGCGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTTAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATG GTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAATGCAATGCCGGAGTGCGAATAAAGTGATGGTACCGACGA ] [+] EMBL BX616699 [ CCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGC GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCG ] [+] EMBL BX611581 [ GATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGC GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCG ] [-] EMBL CNS08Z0S [ TCAAGAACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGGGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTGATGGTACCGACGAGGGCCTCG] consensusID : consensus_9770#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence [GATCGCCCCAGGTGNTCAGCTGATTCGAACATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTGGTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTGTCCGGCGGTTCCTCCAAACACTTTACC] [+] EMBL AL932868 [GATCGCCCCAGGTGNTCAGCTGATTCGAACATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTGGTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTGTCCGGCGGTTCCTCCAAACACTTTACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9770#0 CCGCTACATTTATAAAAGGACCATCAGGAGCTTATATTAAGGGAGGTTTATTTGAAACTA 60 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 CCAGGAAAAAATAAAAATACTTACCCATGAAGCGGTAAAATTAAATCAAATGCGTCAGCC 120 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 AATGTTTACGTATAGGTTTGACGTTTGTCTGCGATAGCAAAGGGTTGCTGTACCGTTATC 180 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 ATTTCACCATCCTCTTCCCTCTCGGTTGATACACG-GTTCAGCTGATTCGAACCATCGTT 239 consensus_9770#1 -----------------------GATCGCCCCAGGTGNTCAGCTGATTCGAAC-ATCGTT 36 * * * ** * * *************** ****** consensus_9770#0 GCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCC 299 consensus_9770#1 GCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCC 96 ************************************************************ consensus_9770#0 ACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCA 359 consensus_9770#1 ACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCA 156 ************************************************************ consensus_9770#0 GGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCCACC 419 consensus_9770#1 GGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACC 216 ************************************** ******** ************ consensus_9770#0 GATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG 479 consensus_9770#1 GATGCGTCGACAA-GTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG 275 ************* ********************************************** consensus_9770#0 GTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACG 539 consensus_9770#1 GTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACG 335 ************************************************************ consensus_9770#0 GAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTG 599 consensus_9770#1 GAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTG 395 ************************************************************ consensus_9770#0 TCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATATGATGAAGCTG 659 consensus_9770#1 TCCGGCGGTTCCTCCAAACACTTTACC--------------------------------- 422 *************************** consensus_9770#0 GGCCAGGAGATGGGAGCCATCGAGGAGGTGGGTCGACGGGGCCGCCTGCTCGAGGGCACC 719 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 ATCAAGCTGTACCAGGACTGCATCAGCTCGCTGGAGCACTGCTACAAGCCGGTCATCGTG 779 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 GCGGTACATTCGGCTTGCATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGG 839 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 TACTGCACGCGGGACGCCTGGTTCTCGCTGAAGGAGGTGGACATCGGGCTGGCGGCGGAC 899 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 GTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTT 959 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 GCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGG 1019 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 CTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCG 1079 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 AGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCAC 1139 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 ACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAA 1199 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 GATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGT 1259 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 AACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTG 1319 consensus_9770#1 ------------------------------------------------------------ consensus_9770#0 ATGGTACCGACGAGGGCCTCG 1340 consensus_9770#1 --------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||