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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9781#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1005 fasta sequence
[GGTTGCGCCTTGTGGTACCGCGCTCGAACGCCCGGATCGCCATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC-GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG-GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC-GCGAACATCCTGAACAAAGAC-GATGTTGCCGACGTGCATTTCGTTTCAC-GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG-AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC-CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCT-CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAGAAGAAGGGCAAGAGGAAATAAAG-CGGCTTTTACGGGTTTTGCTGTTTAGTTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAATGTGCCGGG]
[+] EMBL CNS094SR [GGTTGCGCCTTGTGGTACCGCGCTCGAACGCCCGGATCGCCATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCA CAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAG GCT CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAGAAGAAGGGCAAGAGGAAATAAAG CGGCTTTTACGGGTTTTGCTGTTTAGTTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAATGTGCCGGG]
[+] EMBL BM584888 [ ccgCCGCGCTCGAACGCCCGGATCGCCATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTG ]
[+] EMBL CNS09H9G [ cCCGCGCTCGAACGCCCGGATCGCCATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCA CAAGCTGGGCCTTCCAAGCAGAAAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAG ]
[+] EMBL CNS09PY0 [ CGCGCTCGAACGCCCGGATCGCCATTGCTGTTCAACAAAATGGATCTTTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGCCTTCCCAAATCGTCCATTAGCGCATTCGGTGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTTGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGTTATCGCAAACTGCCGACGATACAGCGCACAAAGCTGGGCCTTCCAAGCAG AAAAAAGGCGGTCCCGGAATTCAGCCGATCCGCA ]
[+] EMBL BX615870 [ ACGCCCGGATCGCCATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGC ]
[+] EMBL BX609576 [ GGATCGCCATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAG ]
[+] EMBL BX622093 [ ATTGCTGTTCAACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGNCGACGCCGAGTTCCANAAGTACAACAAGCGCAAGTACGCGGAAGCGCT C ]
[+] EMBL BM617509 [ ccgACAAAATGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTTGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCGGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCC ]
[+] EMBL BX622850 [ TGGATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTTGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCGGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCTCCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCGAAACAGTCCTTCAAGCGGTTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCGACTCCCCGCTGGACCA ]
[-] EMBL CNS094SS [ ACCAGCGGAAGCCGGTAG TTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCCCCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCCCCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTC TTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGAAACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCCCCGGAAATCCCCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCT CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAGAAGAAGGGCAAGAGGAAATAAAG CGGCTTTTACGGGTTTTGCTGTTTAGTTGCTAAAAAAAGGGCCAAAAAAAAA ]
[+] EMBL BX623495 [ GCGGAAGCC GTAGCTTCGCTTTAGGCTCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTTGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCGGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCTCCCCGGAGCTGCAGATCGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCGAAACAGTCCTTCAAGCGGTTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCGACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACNACNAGCGCAAGTACGCGGAAGCGCT CG ]
[-] EMBL CNS08O5V [ TTAGGCTCCATCCCGCGCCTTCCCAAATCGTCCATTAGCGCATTCGGTGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTTGTTTCAC GGAAACGCAAAAGCAATGGTGGTAAAAAAGCGTTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGCGGTCCCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTTCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATATCGGAAACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAG TGACGCTGATGAAGATGCGCTCGCGTGCTGGATCCGAAACAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCAACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCT CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAAAAGAAGGGCAAGAGGAAATAAAGTCGGCTTTTACGGGTTTTGCTGTTTAGTT ]
[+] EMBL CNS0949T [ TCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCG GA GAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAA CATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCACGGGAAACGCAAAAGCAATGGTGGTGGGAAAG ]
[+] EMBL CNS08O5U [ GCACGGCACCGCGAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATCAGCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTTGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGTTATCGCAAACTGCCGACGATACAGCGCA CAAGCTGGGCCTTCCAAGCAG AAAAAAGGCGGTCCCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTTCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATATCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCGAAACAGTCCTTCAAGCGGCTGGTTAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCAACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGC CTGCGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAAAAGAAGGGCAAGAGGAAATAAAGTCGGCTTTTACGGGTTTTGCTGTTTAGTTGCTAAAAAGTCCAAAAAAAAAAAAAAA ]
[+] EMBL BM592503 [ ccgGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATC GCGAACATCCTGAACAAAGAC GATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAACGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCT CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAA ]
[+] EMBL BX622015 [ CACCGGGCGAANGCATC NCGAACATCCTGAACAAAGACTTATGTTGCCGACGTGCATTTCGTTTCAC GGAAACGCTAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCCGACGATACATCGCAGCAAGCTGGGCCTTCCAAGCAG AAAAAAGGTGGCCTCGGAATTCNGCCGATCCGCACNAACGTTCAGGAANAGATGAATAGTGCCGTCCTCACNCCGGCCATTGAGAAGAAGGANAATATTGCCCGGTTGGCCATGT ]
[+] EMBL BX612489 [ CAG AAAAAAGGTGGCCTCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAATAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCT CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAGAAGAAGGGCAAGAGGAAATAAA ]
[-] EMBL CNS0949U [ CTGCAGAACGAG TGACGCTGATGAAGATGCGCTC CGTGCTGGATCCAAAGCAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATCGACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCT CGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAGAAGAAGGGCAAGAGGAAATAAAG CGGCTTTTA ]
consensusID : consensus_9781#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 908 fasta sequence
[CGGCCGGCGACACCAGCGGAACCGTAGCTTCGCTTTAGGCTCCATCCCGCGCCTTCCCAAATCGTCCATTAGCGCATTCGGTGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCGGAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATCGCGAACATCCTGAACAAAGACGATGTTGCCGACGTGCATTTTGTTTCACGGAAACGCAAAAGCAATGGTGGTGGGAAAGCGTTATCGCAAACTGCCGACGATACAGCGCA-CAAGCTGGGCCTTCCAAGCAGAAAAAAGGCGGTCCCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTTCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAG-AACGAGCTGACGCTGATGAAGATGCGCTCCGTGCTGGATCCGAAACAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCAACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGC-CTCGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAAAAGAAGGGCAAGAGGAAATAAAGTCGGCTTTTACGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTT]
[+] EMBL CNS09IWO [CGGCCGGCGACACCAGCGGAACCGTAGCTTCGCTTTAGGCTCCATCCCGCGCCTTCCCAAATCGTCCATTAGCGCATTCGGTGGCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCGGAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCACCGGGCGAAAGCATCGCGAACATCCTGAACAAAGACGATGTTGCCGACGTGCATTTTGTTTCACGGAAACGCAAAAGCAATGGTGGTGGGAAAGCGTTATCGCAAACTGCCGACGATACAGCGCA CAAGCTGGGCCTTCCAAGCAGAAAAAAGGCGGTCCCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTTCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGAGCTGCAG AACGAGCTGACGCTGATGAAGATGCGCTCCGTGCTGGATCCGAAACAGTCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCAACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGC CTCGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAAAAGAAGGGCAAGAGGAAATAAAGTCGGCTTTTACGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTT]
[-] EMBL CNS09IWP [ GCCGGGTGCCCGCCGAAGAGACGAAGTTACACAGCACGGCACCGGAGGAAAGCGATGACGACGACGACTACGCAGGACTTCCACCCCCGGGCGAAAGCATCGCGAACATCCTGAACAAAGACGATGTTGCCGACGTGCATTTTTTTTCACGGAAACGCAAAAGCAATGGTGGTGGGAAAGCGTTTTCGCAAACTGCCGACGATACAGCGCAGAAAGTTGGGCCTTCCAAGCAGAAAAAAGGCGGTCCCGGAATTCAGCCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTTCCGTCCTCACGCCGGCCATTGAGAAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGAAACTGCAATCCGGAAGCTTAACAGGCTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACCCCGGGGCTGCAGAAACGAG TGACGCTGATGAAGATGCGCTCCGTGCTGGATCCGAAAAAGTCCTTCAAGCGGCTGGAAAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATCAACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAAGCGCTCGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAGAAAAAGAAGGGCAAGAGGAAATAAAGTCGGC ]
[-] EMBL CNS09PY1 [ GCTGGATCCGAAACAGTCCTTTAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTTTCAACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTCGTCGACGAGCTGTTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9781#0 GGTTGCGCCTTGTGGTACCGCGCTCGAACGCCCGGATCGCCATTGCTGTTCAACAAAATG 60
consensus_9781#1 ------------------------------------------------------------
consensus_9781#0 GATCTCTTCGTGATCGACACGGCCGGCGACACCAGCGGAAGCCGTAGCTTCGCTTTAGGC 120
consensus_9781#1 -------------------CGGCCGGCGACACCAGCGGAA-CCGTAGCTTCGCTTTAGGC 40
********************* *******************
consensus_9781#0 TCCATCCCGCGTCTTCCCAAATCGTCCATTAGCGCATTAGATGGCCGGGTGCCCGCCGAA 180
consensus_9781#1 TCCATCCCGCGCCTTCCCAAATCGTCCATTAGCGCATTCGGTGGCCGGGTGCCCGCCGAA 100
*********** ************************** * *******************
consensus_9781#0 GAGACGAAGTTACACAGCACGGCACCGGAGGAAAGCGATGACGACGACGACTACGCAGGA 240
consensus_9781#1 GAGACGAAGTTACACAGCACGGCACCGGAGGAAAGCGATGACGACGACGACTACGCAGGA 160
************************************************************
consensus_9781#0 CTTCCACCACCGGGCGAAAGCATCGCGAACATCCTGAACAAAGACGATGTTGCCGACGTG 300
consensus_9781#1 CTTCCACCACCGGGCGAAAGCATCGCGAACATCCTGAACAAAGACGATGTTGCCGACGTG 220
************************************************************
consensus_9781#0 CATTTCGTTTCACGGAAACGCAAAAGCAATGGTGGTGGGAAAGCGGTATCGCAAACTGCC 360
consensus_9781#1 CATTTTGTTTCACGGAAACGCAAAAGCAATGGTGGTGGGAAAGCGTTATCGCAAACTGCC 280
***** *************************************** **************
consensus_9781#0 GACGATACAGCGCAGCAAGCTGGGCCTTCCAAGCAGAAAAAAGGTGGCCTCGGAATTCAG 420
consensus_9781#1 GACGATACAGCGCA-CAAGCTGGGCCTTCCAAGCAGAAAAAAGGCGGTCCCGGAATTCAG 339
************** ***************************** ** * **********
consensus_9781#0 CCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTGCCGTCCTCACGCCGGCCATTGAG 480
consensus_9781#1 CCGATCCGCACGAACGTTCAGGAAGAGATGAAGAGTTCCGTCCTCACGCCGGCCATTGAG 399
************************************ ***********************
consensus_9781#0 AAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGG 540
consensus_9781#1 AAGAAGGAGAATATTGCCCGGTTGGCCATGTCGGACACTGCAATCCGGAAGCTTAACAGG 459
************************************************************
consensus_9781#0 CTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACC 600
consensus_9781#1 CTGGAACGCAAAAAGACCAAGGGCAAGGGTTGGTACGGACTGGCCGCACCGGAAATCACC 519
************************************************************
consensus_9781#0 CCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTCCGTGCTGGATCCAAAGCAG 660
consensus_9781#1 CCGGAGCTGCAGAACGAGCTGACGCTGATGAAGATGCGCTCCGTGCTGGATCCGAAACAG 579
***************************************************** ** ***
consensus_9781#0 TCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATCGGCAAAATTATC 720
consensus_9781#1 TCCTTCAAGCGGCTGGACAAACGCAAGCAGCCCAAATACTTCGAGATTGGCAAAATTATC 639
*********************************************** ************
consensus_9781#0 GACTCCCCGCTGGATCACTTCAACGAGCGCGGCATGAAGAAGCTAAAGTCGAAATCGCTC 780
consensus_9781#1 AACTCCCCGCTGGACCATTTCAACGAGCGCGGCATGAAGAAGCTTAAGTCGAAATCGCTC 699
************* ** ************************** ***************
consensus_9781#0 GTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAA 840
consensus_9781#1 GTCGACGAGCTGCTGGCCGACGCCGAGTTCCAGAAGTACAACAAGCGCAAGTACGCGGAA 759
************************************************************
consensus_9781#0 GCGCTCGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAG 900
consensus_9781#1 GC-CTCGAGCGGCAGAAGAAGAAAGCCTACCACAAAGCGGTCATGAAGATGAAGAAGGAG 818
** *********************************************************
consensus_9781#0 AAGAAGAAGGGCAAGAGGAAATAAAG-CGGCTTTTACGGGTTTTGCTGTTTAGTTGCTAA 959
consensus_9781#1 AAAAAGAAGGGCAAGAGGAAATAAAGTCGGCTTTTACGGGTAAAA-------------AA 865
** *********************** ************** **
consensus_9781#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAATGTGCCGGG 1005
consensus_9781#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTT--- 908
******************************* * * * **
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||