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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9788#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1034 fasta sequence
[GACCCAAACAACACACAAATAAACGGTTCTACTTGGTG-CCGGAATACATTTTTGTGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC-GG-GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA-CCGTTGCATTCGGCGTGCAAGTGG-AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA-CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG-GC-G-ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG-GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTT-CCATTGTCAAGTGGTTGCCCATGTCCATCCTTCGATTACTCTAAAAAAAAAAAAAAAAAAGGGCACATGTGCGCGG]
[+] EMBL CNS09FN4 [GACCCAAACAACACACAAATAAACGGTTCTACTTGGTGCCCGGAATACATTTTTGTGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCCAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAA CACAGGG GC GCACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGAT ]
[+] EMBL CNS09HP2 [ tggGGTTCTACTTGGTG CCGGAATACATTTTTGCGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACA CCATTGCATTCGGCGTGCAGGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGATCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCA CCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAG TAAGGG TC GTACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTT CCATTGTCAAGTGGTTGCCCATGTCC ]
[+] EMBL CNS09C5V [ GGTTCTACTTGGTGCCCGGAATACATTTTTGTGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCCAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAG AAAG G GCAG ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATG ]
[+] EMBL CNS09LOW [ GTG CCGGAATACATTTTTGTGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAG AAAGGG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGTTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTACAATAAATTATTT CCATTGTCAAGTGGTTGCCCATGTCCATCCTTCGATTACTCTAAAAAAAAAAAAAAAAAAGGGCACATGTGCGCGG]
[+] EMBL CNS093S8 [ TACATTTTTGTGCGG ACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCCAGG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCT ]
[+] EMBL CNS093G7 [ ACATTTTTGCGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACATTAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACA CCATTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGATCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCA CCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAA CGAAAGG AC GCACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTTCCCATTGTCAAGTGGTTGCCCATG ]
[+] EMBL BM590191 [ ccgCATTTTTGTGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTCACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCGCTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAGGCGATCGATCGGGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCAGATCCGAATGCTCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGGAAATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCCGATGGGGACCAGACGCCACTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCACCCCTGG ]
[+] EMBL BX605815 [ GGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCATGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACAC ]
[-] EMBL CNS09C5W [ CATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCCAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCA CTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAA ]
[-] EMBL CNS09HP3 [ CAGTTTGCAAAATGTCTAATCGTACGTTAAACAACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGAAACGCTCGAAGAACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACACCCATTGCATTCGGCGTGCAGGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCA CTTCGGATGGGGATCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCA CCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCGCGCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTT CCATTGTCAAGTGGTTGCCCATGTCCATCC TCGATTACTCTAAAAAA ]
[-] EMBL CNS093G8 [ AAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGAACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACA CCATTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGC CCTTCGGATGGGGTTCAGACGCCGCAAAATATTACCGTCACCGTGTCGAGCTGCCGGTCCA CCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTT CCATTGTCAAGT GTTGCCCATGTCCAT ]
[+] EMBL BX622331 [ AGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACNGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGNTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCNGCATTGAATGCAATTTGAACNGGCGACGACT ]
[-] EMBL CNS098FW [ GATGCCGCTGAAGAGGAGGAGGAGGAAATGAAAACGCTCGAAGAACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCA CTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACATTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTTACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATTACAACTGTCTGTGTGTGTACAATAAATTTTTT CCATTGTC ]
[-] EMBL CNS09QEC [ AAGAGGGGGGGGGGGAAATGGACACGCTCGAAGGACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCC GG GGAAAAAAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCA CTTCGGATGGGGGTCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCA CCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAAT ]
[+] EMBL BX617114 [ AAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAAC GCTACGAACGACAGGTGCTGTGGGCTGCC GGAGGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGTAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTACAATAAATTAT ]
[-] EMBL CNS09LOX [ GCTACGAACGACAGGTGCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCA CTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTACAATAAATTATTT CCATTGTCAAGTGGTTGCCCATGTCCATCCTT ]
[+] EMBL BX623964 [ GCTGTGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTACAATAAATTAT ]
[+] EMBL CNS098FV [ TGGGCTGCC GG GGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGTGAGAAGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCGACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTAG AATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAA GAAGGGCGC GCACACTTTCCCG ]
[-] EMBL CNS09FN5 [ CGTGCTACAACAATAACCGTGAGATGGGTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCCCGCACCCACATGGGCTGGACA CCGTTGCATTCGGCGTGCAAGTGG AATAATGCTGGCTGTG TGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCA CTTCGGATGGGGACCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCA CTCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCG GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGGACGGGCGACG ]
[-] EMBL CNS093S9 [ GGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGCGAAGCG GC G ACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCC GCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCT ]
consensusID : consensus_9788#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 961 fasta sequence
[CTTGGTGCCGGAATACATTTTTGCGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGCGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCCGGGGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGCACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACACCGTTGCATTCGGCGTGCAAGTGGAATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGATCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCACCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGAAGGGCCCGCACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCGGCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTTCCATTGTCAAAAATAAAAAAAAAAAAAAAAAA]
[+] EMBL CNS09QEB [CTTGGTGCCGGAATACATTTTTGCGCGGAACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACTGGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAATGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCAGCGCGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTACGAACGACAGGTGCTATGGGCTGCCGGGGAAAACAAGCAGGAAATAGTGGAAGCCATCGTTTGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGCACGGGTACACGGCACTACACAAAGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCCGAATGCTCGCACCGACATGGGCTGGACACCGTTGCATTCGGCGTGCAAGTGGAATAATGCTGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGATCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCACCCTGGTAACGCTGCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACAGATAGCGAAGAAGGGCCCGCACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTACGGTCGAAACAGGCATGATCGATTAGATTAGTCCGGCAACGGTTGATCGTTCCCCAGCTTCTATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATGCAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTTCCATTGTCAAAAATAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9788#0 GACCCAAACAACACACAAATAAACGGTTCTACTTGGTGCCGGAATACATTTTTGTGCGGA 60
consensus_9788#1 -------------------------------CTTGGTGCCGGAATACATTTTTGCGCGGA 29
*********************** *****
consensus_9788#0 ACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACT 120
consensus_9788#1 ACGGCAATCTTCGGCCATCTCAAACAGTTTGCAAAATGTCTAATCGTACGTTAAACGACT 89
************************************************************
consensus_9788#0 GGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAA 180
consensus_9788#1 GGGATAACATTGCCAAATCGCTAACGAAGGACGATGCCGCTGAAGAGGAGGAGGAGGAAA 149
************************************************************
consensus_9788#0 TGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCA 240
consensus_9788#1 TGGACACGCTCGAAGCACTGGAGGCAAAGATGAGCAAGGTGCCGCGCGGCATGTTCGTCA 209
************************************************************
consensus_9788#0 GCG-GATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTAC 299
consensus_9788#1 GCGCGATGGGACGATCCCGACGATTTAATCGAAGAGGACAAAGAACCGAACGCCAGCTAC 269
*** ********************************************************
consensus_9788#0 GAACGACAGGTGCTGTGGGCTGCCGGGGAAAACAAGCAGGAAATAGTGGAAGCCATCGTT 359
consensus_9788#1 GAACGACAGGTGCTATGGGCTGCCGGGGAAAACAAGCAGGAAATAGTGGAAGCCATCGTT 329
************** *********************************************
consensus_9788#0 TGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAG-ACGGGTACACGGCACTACACAA 418
consensus_9788#1 TGCCGCAAACCGTGCGTAGTGGAAGCGATCGATCGAGCACGGGTACACGGCACTACACAA 389
************************************* **********************
consensus_9788#0 AGCGTGCTACAACAATAACCGTGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCC 478
consensus_9788#1 AGCGTGCTACAACAATAACCGCGAGATGGCTATGGTGTTGCTGCGGTACGGGTCCGATCC 449
********************* **************************************
consensus_9788#0 GAATGCCCGCACCGACATGGGCTGGACACCGTTGCATTCGGCGTGCAAGTGGAATAATGC 538
consensus_9788#1 GAATGCTCGCACCGACATGGGCTGGACACCGTTGCATTCGGCGTGCAAGTGGAATAATGC 509
****** *****************************************************
consensus_9788#0 TGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGA 598
consensus_9788#1 TGGCTGTGCTGCGCTGTTGCTGCAGCATGGTGCCGACGTGAATGCACCTTCGGATGGGGA 569
************************************************************
consensus_9788#0 CCAGACGCCGCTACACATTACCGTCACCGTGTCGAGCTGCCGGTCCACTCTGGTAACGCT 658
consensus_9788#1 TCAGACGCCGCTACATATTACCGTCACCGTGTCGAGCTGCCGGTCCACCCTGGTAACGCT 629
************** ******************************** ***********
consensus_9788#0 GCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACA 718
consensus_9788#1 GCTGATGAATGGGCGCTGTGATCCGGAGCGTCGGAACAACTCGGATGAAAAGGCTGAACA 689
************************************************************
consensus_9788#0 GATAGCGAAGCGAAGCGGCGACACTTTCCCGTTGTTTGCAATGGCGCATTCGGCCTTTAC 778
consensus_9788#1 GATAGCGAAGAAGGGCCCGCACACTTTCCCGTTGTTTGCGATGGCGCATTCGGCCTTTAC 749
********** ** ******************* ********************
consensus_9788#0 GGTCGAAACAGGCATGATCGATTAGATTAGTCCGGCAACGGTTGATCGTTCCCCAGCTTC 838
consensus_9788#1 GGTCGAAACAGGCATGATCGATTAGATTAGTCCGGCAACGGTTGATCGTTCCCCAGCTTC 809
************************************************************
consensus_9788#0 TATTATCGGTTCGTTTGCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATG 898
consensus_9788#1 TATTATCGGTTCGTTTTCTCGCTTTAACAATCAATAATTCTATTATCTCGGCATTGAATG 869
**************** *******************************************
consensus_9788#0 CAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTT 958
consensus_9788#1 CAATTTGAACGGGCGACGACTGGTGATAACAACTGTCTGTGTGTGTATAATAAATTATTT 929
************************************************************
consensus_9788#0 CCATTGTCAAGTGGTTGCCCATGTCCATCCTTCGATTACTCTAAAAAAAAAAAAAAAAAA 1018
consensus_9788#1 CCATTGTCAAAAA----------------------------TAAAAAAAAAAAAAAAAAA 961
********** *******************
consensus_9788#0 GGGCACATGTGCGCGG 1034
consensus_9788#1 ----------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||