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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 784 fasta sequence
[AGGCAGAATTCGGCACGATGGGAATTGTTGGAAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA-GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT-AAAACAGTTGT-GGTCTTTG-TTTTTT-AATTGAATTTATATAC-TTTTCATTAT-CAAGCGATAACG-TC-GGAATCGG-AAAACGGGCAAATAATTAAGGCGTATGC-GGAATGTGCAGAATTAG-AAGGGAGAAGAATAAAAACCACCCAAGCATTTTANAAAAAA]
[+] EMBL BX468523 [AGGCAGAATTCGGCACGATGGGAATTGTTGGAAG TCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAA ]
[+] EMBL BX626403 [ AAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGTATCCACGGTGCAAACGCACT AAAACAGATGT TTCTTTGTTTTTTT AATTGAATTTATATAC TTTTCTTTAC CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAANGNGTATGC GGAATGTGCAGAATTAG AAGGGAGAAGAATAAAAACCNCC ]
[+] EMBL BX623410 [ AAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGTATCCACGGTGCAAACGCACT AAAACAG ]
[+] EMBL BM618885 [ ccgaattgTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAAGGCGTATGC GGAATGT ]
[+] EMBL BM634297 [ ccgattgTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATACTTTTTCATTAT CAAGCGAT ]
[+] EMBL BM601350 [ ccgattgTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AA ]
[+] EMBL BX611192 [ GTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGACCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATTGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCG ]
[+] EMBL BM635492 [ ccgATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGGAAAAACGGGC ]
[+] EMBL BX621182 [ nATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TCGGGAATCGG AAAACGGGCAAATAATTAAGGCGTATGCGGGAATGTGCAGAATTAGAAAGGGAGAAGAATAAAAACCA ]
[+] EMBL BX626366 [ AGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCNCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGNTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACNGCTATTGGATCNAGATCTTCAACGCATCGACGGTGCAAACNCACT AAAACAGTTGTNGGTCTTTG TTTTTTNAATTGAATTTATATACTTTTTCNTTATCCAAGCGATAACGTTN GGAATCGG AAAACGGGCA ]
[-] EMBL AGA280459 [ ATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAAGGCGTATGC GGAATGTGCAGAATTAG AAGGGAGAAGAATAAAAACCACCCAAGCATTTTANAAAAAA]
[-] EMBL AGA284366 [ CACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAAGGCGTATGC GGAATGTGCAGAATTAG AAGGGAGAAGAATAAAAACCACCCAAGCATATTAAAAAAAA]
[-] EMBL AGA283221 [ CGCACTAAAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GG ]
consensusID : consensus_9813#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 700 fasta sequence
[CCGCCCACGCGTCCGAACAAATCCAATAGGATTTAACCCCGGGGAGTTGTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCC-GGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGTGTCTTTGTTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCGATAACGTCG]
[+] EMBL BM584481 [CCGCCCACGCGTCCGAACAAATCCAATAGGATTTAACCCCGGGGAGTTGTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGA ]
[+] EMBL BM633444 [ ccgTAGGATTTAACCCCGGGGAGTTGTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCC GGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGTGTCTTTGTTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCGATAACGTCG]
[+] EMBL BX629026 [ AACTCCGCAGAATTGTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGTGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCC GGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGAT ]
consensusID : consensus_9813#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 698 fasta sequence
[CCGCTTGCTGTGCAATATTATTTAATTGATATTTCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGT-GTCTTTGG-TTTTTAATTGAATTTATATAC-TTTTCTTTATCAAGCGATAACG]
[+] EMBL BM637873 [CCGCTTGCTGTGCAATATTATTTAATTGATATTTCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGT GTCTTTGG TTTTTAATTGAATTTATATAC TTTTCTTTATCAAGCGATAACG]
[+] EMBL BM625580 [ ccgTGATATTTCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACTAAAACAGTTGTGGTCTTTGGTTTTTTAATTGGATTTATATACTTTTTCATTATCAAGCGATAA ]
[+] EMBL AGA285670 [ CTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATTGGTTGGGCGTCAAGTACGTGAAGCGCCCGGGCGAGGGACGCATGAAGGGTTTGGCCCTTATTAAGGACCC ]
consensusID : consensus_9813#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[TTTTTTTTTTTTTTTTTGGACGCTTTCAACGGGAATAATACAACAAATCCAATTGGATTTAACTCCGCAGAATTGTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGG]
[+] EMBL AGA281640 [TTTTTTTTTTTTTTTTTGGACGCTTTCAACGGGAATAATACAACAAATCCAATTGGATTTAACTCCGCAGAATTGTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGG]
consensusID : consensus_9813#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence
[GTGTTTATTAAGCGCCAGTGGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTG]
[+] EMBL AGA282164 [GTGTTTATTAAGCGCCAGTGGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9813#0 ------------------------------AGGCAGAATTCGG----CACGATGGGAATT 26
consensus_9813#2 -----------------------CCGCTTGCTGTGCAATATTA----TTTAATTGATATT 33
consensus_9813#1 ----------------------CCGCCCACGCGTCCGAACAAA----TCCAATAGGATTT 34
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 TTTTTTTTTTTTTTTTTGGACGCTTTCAACGGGAATAATACAACAAATCCAATTGGATTT 60
consensus_9813#0 GT----TGGAAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAA 82
consensus_9813#2 TCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAA 93
consensus_9813#1 AACCCCGGGGAGTT--GTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAA 92
consensus_9813#4 -----------GTG--TTTATTAAGCGCCAGTG-GCCTTAGCAAGTGGAAGAAAGCCCAA 46
consensus_9813#3 AACTCCGCAGAATT--GTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAA 118
* ** * * ** ******************** * ***
consensus_9813#0 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 142
consensus_9813#2 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 153
consensus_9813#1 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 152
consensus_9813#4 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 106
consensus_9813#3 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 178
************************************************************
consensus_9813#0 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 202
consensus_9813#2 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 213
consensus_9813#1 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGC 212
consensus_9813#4 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 166
consensus_9813#3 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 238
******************************************* ****************
consensus_9813#0 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 262
consensus_9813#2 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 273
consensus_9813#1 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 272
consensus_9813#4 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 226
consensus_9813#3 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 298
************************************************************
consensus_9813#0 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 322
consensus_9813#2 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 333
consensus_9813#1 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 332
consensus_9813#4 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 286
consensus_9813#3 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 358
************************************************************
consensus_9813#0 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCC 382
consensus_9813#2 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCC 393
consensus_9813#1 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCC 392
consensus_9813#4 CCGATCGTAAGGAATGCGTTCAGTG----------------------------------- 311
consensus_9813#3 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCC 418
*************************
consensus_9813#0 ACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 442
consensus_9813#2 ACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 453
consensus_9813#1 ACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 452
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 ACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 478
consensus_9813#0 GCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCG 502
consensus_9813#2 GCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCG 513
consensus_9813#1 GCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCG 512
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 GCGGCTACGGTCACATCGGCATCATGG--------------------------------- 505
consensus_9813#0 ATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCT 562
consensus_9813#2 ATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCT 573
consensus_9813#1 ATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCT 572
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 ------------------------------------------------------------
consensus_9813#0 TTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGC 622
consensus_9813#2 TTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGC 633
consensus_9813#1 TTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGC 632
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 ------------------------------------------------------------
consensus_9813#0 ACTAAAACAGTTGTGGTCTTTGTTTTTTAATTGAATTTATATACTTTTCATTATCAAGCG 682
consensus_9813#2 ACTAAAACAGATGTG-TCTTTGGTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCG 692
consensus_9813#1 ACTAAAACAGATGTG-TCTTTGTTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCG 691
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 ------------------------------------------------------------
consensus_9813#0 ATAACGTCGGAATCGGAAAACGGGCAAATAATTAAGGCGTATGCGGAATGTGCAGAATTA 742
consensus_9813#2 ATAACG------------------------------------------------------ 698
consensus_9813#1 ATAACGTCG--------------------------------------------------- 700
consensus_9813#4 ------------------------------------------------------------
consensus_9813#3 ------------------------------------------------------------
consensus_9813#0 GAAGGGAGAAGAATAAAAACCACCCAAGCATTTTANAAAAAA 784
consensus_9813#2 ------------------------------------------
consensus_9813#1 ------------------------------------------
consensus_9813#4 ------------------------------------------
consensus_9813#3 ------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||