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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9831#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1068 fasta sequence
[CATCAACCAAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAAC-AAACTGCTAATCAGCAGG-TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG-AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG-CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAATTGGGTTAAAAAAAAAAAAAAAAAAGGCCCAGGTCCCCGGC]
[+] EMBL CNS08W2X [CATCAACCAAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGTTTGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGAAAAAAACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCAGGTCCCCGGC]
[+] EMBL CNS08UAD [ ccAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACGTAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAAAGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCAATTCAC ]
[+] EMBL CNS09RC4 [ tCAT CA CCCGCACCGATACGGAA CAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTT ]
[+] EMBL CNS08VQD [ CACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAAAAAAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAAaa ]
[+] EMBL CNS08TGM [ ACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGGATGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGG ]
[-] EMBL CNS09RC5 [ ATACGGAACCAACAAAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT GACCGACAGAATTG ]
[+] EMBL BM610062 [ ccgCGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGACACCGTCGCGTGCCGCCAGCAAGCAGGCC ]
[+] EMBL BM624622 [ ccgC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGC ]
[+] EMBL CNS097NP [ cAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGGAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCA ]
[+] EMBL BM619392 [ ccGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCA ]
[+] EMBL CNS09HDL [ CTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCAAG AAAACATTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAACAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCA ]
[-] EMBL CNS08W2Y [ ATTTTTTTTAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAAAAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGGACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTTTCGCACGGAAAAGTACCAAAAGCTGAAGGGGGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAAACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAAAAACCGCGGTTTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTTTGGCCCCCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGGTGAGCCATCGAAACCTGCCCGGCGATAACTACACCGAGTGTTCCTTCTTTTTTTTCTACATCCTCTGCACGATGTCCATCCGGCAAAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGAAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTAACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT GACCGACAGAAaa ]
[-] EMBL CNS097NQ [ TGGGAGAAGGATTAACCTGGGTGATGGTTTTTCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAAACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGGAAAGCTGAAGAACAACAACCGCGTTCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCCCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT GACCGACAGAATTGGGTTttctagg ]
[+] EMBL BX608446 [ AATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAATTGGGg ]
[-] EMBL CNS08TGN [ GCGATGAGGAAAAGCTGAAGAACAACAACCGCGGTCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCCCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAATTGGGTTgg ]
[+] EMBL BX608812 [ CGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT ]
[-] EMBL CNS08VQE [ CTGCACGATGTCCACCCGGCAGAACATCCAGAATTTGTTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCG ]
consensusID : consensus_9831#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 972 fasta sequence
[CCCCAGGTTTACTGAAGGAGAAAAAACAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCA-GGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAACACTCCACCACACCACGACCGGACGGGTTTGACTACCACCACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGAATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAATCTTTCGTTTCAAAGATGGACCGACAGAATTGGGGTTTGTCTAG]
[+] EMBL AL694231 [CCCCAGGTTTACTGAAGGAGAAAAAACAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCA GGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGC ]
[+] EMBL BM634670 [ ccGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAACACTCCACCACACCACGACCGGACGGGTTTGACTACCACCACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGAATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAATCTTTCGTTTCAAAGATGGACCGACAGAATTGGGGTTTGTCTAG]
consensusID : consensus_9831#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 968 fasta sequence
[CCAATTGCTGTTGATTATTCCTATAAATTGTGTATAAAAAGTACGCTTCCAGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCAAAAAAACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACTGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGC-GCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATGTTCTC]
[+] EMBL CNS09EUO [CCAATTGCTGTTGATTATTCCTATAAATTGTGTATAAAAAGTACGCTTCCAGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCAAAAAAACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACTGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGC GCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATGTTCTC]
[-] EMBL CNS09HDM [ TGCCGCAAGAAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAATTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGGGGGGGGGGGGGGATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTT ]
[-] EMBL CNS08UAE [ TGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACAAAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGC GCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAAAAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9831#0 CATCAACCAAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAACAAAC 60
consensus_9831#2 ------------------------------------------------------------
consensus_9831#1 ------------------------------------------------------------
consensus_9831#0 TGCTAATCAGCAGGTGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTC 120
consensus_9831#2 ----------------------------------------CCAATTGCTGTTGATTATTC 20
consensus_9831#1 ---------------CCCCAGGTTTACTGAAGGAGAAAAAACAATTGCTGTTGATTATTC 45
*******************
consensus_9831#0 CTATAAATTGTGTATCAAAAAGTACGCTTCCAG-CCACGAAAACCTTCCAACAAGCTCGA 179
consensus_9831#2 CTATAAATTGTGTAT-AAAAAGTACGCTTCCAG-CCACGAAAACCTTCCAACAAGCTCGA 78
consensus_9831#1 CTATAAATTGTGTATCAAAAAGTACGCTTCCAGGCCACGAAAACCTTCCAACAAGCTCGA 105
*************** ***************** **************************
consensus_9831#0 CCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGG 239
consensus_9831#2 CCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGG 138
consensus_9831#1 CCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGG 165
************************************************************
consensus_9831#0 GAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAG 299
consensus_9831#2 GAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAG 198
consensus_9831#1 GAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAG 225
************************************************************
consensus_9831#0 AAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAG 359
consensus_9831#2 AAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAG 258
consensus_9831#1 AAGTCGAAAAGCAGAGCAAAAAATTGGAAAA-CGGAAAGAAACGCTCGGCGAATCGTTAG 284
******************************* ****************************
consensus_9831#0 ACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCG 419
consensus_9831#2 ACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCG 318
consensus_9831#1 ACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCG 344
******************************* ************** *************
consensus_9831#0 ATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCA-CTG 478
consensus_9831#2 ATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCAAAAAAACTG 378
consensus_9831#1 ATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCA-CTG 403
*************************************************** * ***
consensus_9831#0 CTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCA 538
consensus_9831#2 CTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCA 438
consensus_9831#1 CTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCA 463
************************************************** *********
consensus_9831#0 ATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGT 598
consensus_9831#2 ATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACTGAGTGT 498
consensus_9831#1 ATCTCGTGGATCCAGGG-CTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGT 522
***************** *********************************** ******
consensus_9831#0 TCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATG 658
consensus_9831#2 TCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATG 558
consensus_9831#1 TCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATG 582
************************************************************
consensus_9831#0 CTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACG 718
consensus_9831#2 CTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACG 618
consensus_9831#1 CTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACG 642
************************************************************
consensus_9831#0 CCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGAC 778
consensus_9831#2 CCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGAC 678
consensus_9831#1 CCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAACACTCCACCACACCACGACCGGAC 702
*********************************** **** ******* ** ********
consensus_9831#0 GGGTTTGACTACCACCACCACCA------ATCGCCTTTTGTGGCAACTAATATTTAACAG 832
consensus_9831#2 GGGTTTGACTACCACCACCACCA------ATCGCCTTTTGTGGCAACTAATATTTAACAG 732
consensus_9831#1 GGGTTTGACTACCACCACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAG 762
*********************** *******************************
consensus_9831#0 CAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATT 892
consensus_9831#2 CAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATT 792
consensus_9831#1 CAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATT 822
************************************************************
consensus_9831#0 TAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTA 952
consensus_9831#2 TAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTA 852
consensus_9831#1 TAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTA 882
************************************************************
consensus_9831#0 GTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAA 1012
consensus_9831#2 GTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAA 912
consensus_9831#1 GTAGTAGTAGAATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAATCTTTCGTTTCAAA 942
********** *********************************** *************
consensus_9831#0 GATGGACCGACAGAATTGGGTTAAAAAAAAAAAAAAAAAA---GGCCCAGGTCCCCGGC 1068
consensus_9831#2 GATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATGTTCTC--- 968
consensus_9831#1 GATGGACCGACAGAATTGGGGTTTGTCTAG----------------------------- 972
****** * * ** *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||