These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9861#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1204 fasta sequence [GTTGACATTTGCGCGCTGACGAGTATTGTTGATACCTGTGCACGAAAAGAAAAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG-CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG-GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC-GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT-CCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATTTTCTCCGG-AAACCAATA] [+] EMBL CNS09GXI [GTTGACATTTGCGCGCTGACGAGTATTGTTGATACCTGTGCACGAAAAGAAAAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAG AATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTG CACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGT ACGATTATATATATATTTACATACACTTGTTATGT ] [+] EMBL CNS08TWI [ GCGCGCTGACGAGTATTGTTGATACCTGTGCACGAAAAGAAAAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTAAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAG ACTCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACAAAAAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGAAAATCCACTTATTTATGTAGTGTATGTG ] [+] EMBL CNS08YC8 [ ACGAGTATTGTTGATACCTGTGCACGAAAAGAAAAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAG AATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAA CCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGCGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCATTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAAT ] [+] EMBL BM601635 [ ccgTGTTGATACCTGTGCACGAAAAGAAAAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCACACTCAATCCTGCTGGAAACCCTACCGC ] [+] EMBL CNS08YBG [ AAAAAAAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAG AATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCG ] [+] EMBL CNS08VA5 [ TTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAGTCGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAGTGGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAG ATTCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGAATTGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAA ] [+] EMBL CNS08U2O [ TGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGAATTCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTG CACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGCGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCATTGCGGCTGCCGGCAAATGACCTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCACGGGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT CCGTAAA ] [+] EMBL CNS08FCR [ GCAGCTGTAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAG GAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGATCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAG AATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACTCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGAGAAAACCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGAAAAGCCTCGA ] [+] EMBL BX604161 [ TAACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTT ] [+] EMBL BX621648 [ AACACGTCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGANNAGGATGCGGGATTAAGCGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGGCATTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGNTTGCTCGTCTTTATCCTGGCGCTTTGC ] [+] EMBL BX615892 [ TCCGCGATCCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATATCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGTAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGC ] [+] EMBL BX624707 [ CCTCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGANGATGCGGGATTAAGCGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGGCATTGCGGCTGCCGGCAAATGACTTTTCATGCAAT ] [+] EMBL BX615933 [ TCCCGGAATCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAG CGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATATCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGC ] [-] EMBL CNS09GXJ [ AAAATGAAACGACAG CGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAAAACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTTGTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT CCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATTTTCTCTGG ca ] [-] EMBL CNS08VA6 [ TTTACGTGGAGGAACCGTACATGAGTGAG GGATATGAATTCCAACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGGACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATTTAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTG TTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTTGCCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATTTTCTCCGGCAAACCAATA] [-] EMBL CNS08YBH [ GCTGCAAGCGATCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTT CTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT CCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATTTTCTCCGG AAACCAAT ] [-] EMBL CNS08U2P [ TCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTTATTCGCGTTCCGATGACCCCAAACTAAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGGACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCCCCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAAAACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGCGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCATTGCGGCTGCCGGCAAATGACCTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTTGTTCGCAATTCCACTTATTTATGTAGTGTTTGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT CCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGGGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATTTTCTCC ] [-] EMBL CNS08YC9 [ TCGCGCTGAGATTCAACTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCACACTCAATCCTGCTGGAAACCCTACCGCGCGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAGCCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAGCAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGGAAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGACGAGGATGCGGGATTAAGCGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCATTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTTCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT CCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGAT ] [-] EMBL CNS08TWJ [ TGAGCGGCGAGTATGACGATAGCTTTCCGCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTTCTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAAAACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGATTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTT CCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATT ] [-] EMBL CNS090SJ [ CAAATGACTTTTCATGCAATGGGAGCGATTGTGATATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTTGTTCGCAATTCCACTTATTTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAACCACAGCGCGAAACTGTGACCAC GGGGAAGGCATTGTGTAACGGTTATATATATATTTACATACACTTGTTATGTTAGTGTCCTTTTCCCGTAAACTGTATTCTGTATTACGTTTTTCGTGGAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATA ] [-] EMBL CNS08FCS [ GGAGGTACAGCGACTAACTGAAGGATTATGAGCGGCGAGCGGTGTCAAACATCTGTAAAAAGAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATA ] consensusID : consensus_9861#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence [CCGCCCACGCGTCCGACGAATAGAATAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAGTCGGAAATAAGGCGAAGATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAGCGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGGACATGAGTGAGGGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCCACTGTTCGATACCTCAATTGAAGAAGTTGAACGAAATAGACAAGGACGACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCGCACTCAATCCTGCTGGAAACCCTACCG] [+] EMBL BM643056 [CCGCCCACGCGTCCGACGAATAGAATAAGAAATTTGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAGTCGGAAATAAGGCGAAGATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAAAATGAAACGACAGCGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACCGGACATGAGTGAGGGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCGATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCCACTGTTCGATACCTCAATTGAAGAAGTTGAACGAAATAGACAAGGACGACGAAATCTATGCACGCAACGTGATTCGCGTTCCGATGACCCCGCACTCAATCCTGCTGGAAACCCTACCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9861#0 GTTGACATTTGCGCGCTGACGAGTATTGTTGATACCTGTGCACGAAAAGAAAAAGAAATT 60 consensus_9861#1 -------------------------CCGCCCACGCGTCCG-ACGAATAGAATAAGAAATT 34 * * * * * ***** **** ******** consensus_9861#0 TGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAA 120 consensus_9861#1 TGCTTTTGGAAAGTTTGTTTGTATTATCGCAGCTGTAACACGTCCGCGATCCTCCCGGAG 94 *********************************************************** consensus_9861#0 TCGGAAATAAGGCGAAAATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAA 180 consensus_9861#1 TCGGAAATAAGGCGAAGATGAAAGTCCTGCCCCAGCATCTGGCCGCACCAATATTCGCAA 154 **************** ******************************************* consensus_9861#0 AATGAAACGACAGCGGGTCAAAGCTGAACCGAGCAGCAGTCATGTTTACGTGGAGGAACC 240 consensus_9861#1 AATGAAACGACAGCGGGTCAAAGCTGGACCGAGCAGCAGTCATGTTTACGTGGAGGAACC 214 ************************** ********************************* consensus_9861#0 GTACATGAGTGAGGGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCG 300 consensus_9861#1 GGACATGAGTGAGGGATATGAATTCCCACTGGCTCAACACAAAGCGGCACCCATAGAGCG 274 * ********************************************************** consensus_9861#0 ATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCAA 360 consensus_9861#1 ATGGCTGGAGGCGCAAATCCTTCCGGGTGATACGCTGCAAGCGATCGCGCTGAGATTCCA 334 ********************************************************** * consensus_9861#0 CTGTTCGATACCTCAATTGAAGAAGTTGAACAAAATAGACAAGGACAACGAAATCTATGC 420 consensus_9861#1 CTGTTCGATACCTCAATTGAAGAAGTTGAACGAAATAGACAAGGACGACGAAATCTATGC 394 ******************************* ************** ************* consensus_9861#0 ACGAAACGTGATTCGCGTTCCGGTGACCCCACACTCAATCCTGCTGGAAACCCTACCGCG 480 consensus_9861#1 ACGCAACGTGATTCGCGTTCCGATGACCCCGCACTCAATCCTGCTGGAAACCCTACCG-- 452 *** ****************** ******* *************************** consensus_9861#0 CGTGCACACGAGCGGGAACAGCAGCCCCAAAAACATCACAACCACACCGCCGAGTGTAAG 540 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 CCATGTTGCGGTGGAAGCGAAAGCCACCCTGGACGAGAAGCTGATTCTTGCCGCCGTAAG 600 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 CAACGCCTCGATTCAGCCGAGCAGCAGCGCTGCCACGCAGTTTCCTAGAAAGTCTTCCGG 660 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 AAAACACAGGGACCGTGCCGACCGGTCGAGTGAAATCGCGCTCGACGATCTGCACGGCGA 720 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 CGAGGATGCGGGATTAAGTGAGCCGCTGCTGCTGAGCGGCGAGTATGACGATAGCTTTCC 780 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 GCAGCCGCGGCCACTGCGGCTGCCGGCAAATGACTTTTCATGCAATGGGAGCGATTGTGA 840 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 TATATCCTGGATTTGTTTGCTCGTCTTTATCCTGGCGCTTTGCTTCGCAATTCCACTTAT 900 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 TTATGTAGTGTATGTGGCGGAACACATAGAAAAATATCATCACGATAGTTTTAATGTTAA 960 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 CCACAGCGCGAAACTGTGACCACGGGGAAGGCATTGTGTAACGATTATATATATATTTAC 1020 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 ATACACTTGTTATGTTAGTGTCCTTTTCCGTAAACTGTATTCTGTATTACGTTTTTCGTG 1080 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 GAGGTACGGCGACTAACTGAAGGATTGTGAGCGGCGAGCGGTGTCAAACATCTGTAAAAA 1140 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 GAGTGCCTTTTACATCTGTTGATTAGCTCTTTAAATAAAATGATATTTTCTCCGGAAACC 1200 consensus_9861#1 ------------------------------------------------------------ consensus_9861#0 AATA 1204 consensus_9861#1 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||