These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9888#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1218 fasta sequence [CCGAGGGCAGGTCCCAGAAGCAAATTCGATTAG-CCCGCCCGTCCGGCGGGGTCAGTGCGAGAAAGAGAAA-ATTGATAATAGTTATCAGCGCGGGGAGTTTGTTTAAAACAACGGTCGACCGACGGCCCTGCCGATAGTTGTTGTTTGCTGCAAGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC-TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC-GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA-CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG-AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA-TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGGCACC-GGTGGAT-CGCGTTCGGCGGTTCGTACCCGGGCTCGCTGGCCGCCTGGCTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCAGTGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGCTGGAGCGCTACTCGGCCGACTGTGTGCGGGCGGTCAGGAGCGCCTTCCAGCAGGTGGAAACGCTGCTCAAGCACATGATCGGGCAGCGCACGCTGAACGAAAAGTTCCAGCTGTGCGATCCGGTCGAGCGGTCGATCGAGAATCCGCTCGACATTGCCAACCTGTTCGAGGCGATCGCGAGCAATTTCGCCGGCGTAGTGCAGTACAACAAGGACAACAGCCCGCACGCTACCGTGACGATCGACG] [+] EMBL BM591743 [CCGAGGGCAGGTCCCAGAAGCAAATTCGATTAG CCCGCCCGTCCGGCGGGGTCAGTGCGAGAAAGAGAAA ATTGATAATAGTTATCAGCGCGGGGAGTTTGTTTAAAACAACGGTCGACCGACGGCCCTGCCGATAGTTGTTGTTTGCTGCAAGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCCTTTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCACCCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACGAAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCG ] [+] EMBL BX619158 [ ATTAGNCCCGCCCGTCCGGCGGGGTCAGTGCGAGAAAGAGAAANATTGATAATAGTTATCANCGCGGGGAGTTTGTTTAAAACAACGGTCGACCGACGGCCCTGCCGATAGTTGTTGTTTGCTGCAAGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGCNGGAGGTGTACGGTGTGCGCCGCTTT ] [+] EMBL BM603470 [ ccgTGTTGTTTGCTGCAAGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATC ] [+] EMBL BM626925 [ ccgGCAAGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGG ] [+] EMBL BM588047 [ ccgGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGG ] [+] EMBL BM591585 [ cCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGGCACCGGGTGGATCCGCGTTCGGCGGTTCGTAC ] [+] EMBL BM625838 [ cCGGTCAGCAGTCGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTAGACCGACCAAAAGTGTCCCCATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGATTTTGGCCTACTTCATCGT ] [+] EMBL AGA285555 [ ATTTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACAGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTG ] [+] EMBL CNS09GAC [ TTTGAGTGCCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTT GATCGAGCAGCAGCTAGATCAC ACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTA ] [+] EMBL AGA284768 [ CTCCGCGTGTGCCTCCACGCCGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGAT GGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCG ] [+] EMBL BX628670 [ TTTCTTTATCCCTTCC TTGGGGTGATGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGGCACC GGTGGAT CGCGTTCGGCGGTTCGTACCCGGGCTCGCTGGCCGCCTGGCTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCAGTGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGCTGGAGCGCTA ] [+] EMBL BM599513 [ ccgTGTTTCTGCTCCTCGGCGGGGC GGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCA CCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACG AGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGGCACC GGTGGAT CGCGTTCGGCGGTTCGTACCCGGGCTCGCTGGCCGCCTGGCTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCAGTGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGCTGGAGCGCTACTCGGCCGACTGTGTGCGGGCGGTCAGGAGCGCCTTCCAGCAGG ] [+] EMBL BM607613 [ ccgGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGA TTTGGCCTACTTCATCGTGGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGGCACC GGTGGAT CGCGTTCGGCGGTTCGTACCCGGGCTCGCTGGCCGCCTGGCTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCAGTGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGCTGGAGCGCTACTCGGCCGACTGTGTGCGGGCGGTCAGGAGCGCCTTCCAGCAGGTGGAAACGCTGCTCAAGCACATGATCGGGCAGCGCACGCTGAACGAAAAGTTCCAGCTGTGCGATCCGGTCGAGCGGTCGATCGAGAATCCGCTCGACATTGCCAACCTGTTCGAGGCGATCGCGAGCAATTTCGCCGGCGTAGTGCAGTACAACAAGGACAACAGCCCGCACGCTACCGTGACGATCGACG] consensusID : consensus_9888#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 992 fasta sequence [CCGCCCACGCGTCCGTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCAGCGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGCTGGAGCGCTACTCGGCTGACTGTGTGAGGGCGGTCCGGAGCGCCTTCCAGCAGGTGGAAACGCTGCTCAAGCACATGATCGGGCAGCGCACGCTGAACGAAAAGTTCCAGCTGTGCGATCCGGTCGAGCGGTCGATCGAGAATCCGCTCGACATTGCCAACCTGTTCGAGGCGATCGCGAGCAATTTCGCCGGCGTAGTGCAGTACAACAAGGACAACAGCCCGCACGCTACCGTGACGATCGACGAGGTGTGTGACGTGATGGTGAACCAGACGATCGGGGCACCTGTGTCCCGGCTGGCCGAGGTGAACCGGATACTGCTGAAGCAGAGCAACACCACCTGTCTGGACTTTGTGTACGAGAAGTCGATCGAGGAGATGCGCAACACCTCCTGGGGATCGTCCCAAGCTAGTGGAGCCCGACAGTGGACGTACCAGACGTGCAACGAGTTTGGATTCTATCAAACGTCCAACAATGCCAGCTCCGTGTTTGGCGACCGCTTTCCGGTGGAGTTCTTCGTGCGCCAGTGCGTCGACGTGTACGGTACCCGGTTCGGGGCGGAATCGCTTGCACGGGCCGTCTACCGGACCAACACCAACTACGGTGCGCTCGATCCGGCCACCACGAACGTGCTGTACGTGCACGGCAACATCGACCCGTGGCACCGGCTGGGACTGACCGAAAGCAACGACATCCACATGCCCACCATCCTGATCGACGGCACGGCCCACTGTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAGCTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTACGAACTTACTGGCGATATAGTAGATAAGGTTGAAATACAAAACTTTTACCCCCGAAAAAAAA] [+] EMBL BM635999 [CCGCCCACGCGTCCGTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCAGCGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGCTGGAGCGCTACTCGGCTGACTGTGTGAGGGCGGTCCGGAGCGCCTTCCAGCAGGTGGAAACGCTGCTCAAGCACATGATCGGGCAGCGCACGCTGAACGAAAAGTTCCAGCTGTGCGATCCGGTCGAGCGGTCGATCGAGAATCCGCTCGACATTGCCAACCTGTTCGAGGCGATCGCGAGCAATTTCGCCGGCGTAGTGCAGTACAACAAGGACAACAGCCCGCACGCTACCGTGACGATCGACGAGGTGTGTGACGTGATGGTGAACCAGACGATCGGGGCACCTGTGTCCCGGCTGGCCGAGGTGAACCGGATACTGCTGAAGCAGAGCAACACCACCTGTCTGGACTTTGTGTACGAGAAGTCGATCGAGGAGATGCGCAACACCTCCTGGGGATCGTCCCAAGCTAGTGGAGCCCGACAGTGGACGTACCAGACGTGCAACGAGTTTGGATTCTATCAAACGTCCAACAATGCCAGCTCCGTGTTTGGCGACCGCTTTCCGGTGGAGTTCTTCGTGCGCCAGTGCGTCGACGTGTACG ] [-] EMBL AGA283472 [ AGCCCGACAGTGGACGTACCAGACGTGCAACGAGTTTGGATTCTATCAAACGTCCAACAATGCCAGCTCCGTGTTTGGCGACCGCTTTCCGGTGGAGTTCTTCGTGCGCCAGTGCGTCGACGTGTACGGTACCCGGTTCGGGGCGGAATCGCTTGCACGGGCCGTCTACCGGACCAACACCAACTACGGTGCGCTCGATCCGGCCACCACGAACGTGCTGTACGTGCACGGCAACATCGACCCGTGGCACCGGCTGGGACTGACCGAAAGCAACGACATCCACATGCCCACCATCCTGATCGACGGCACGGCCCACTGTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAGCTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTACGAACTTACTGGCGATATAGTAGATAAGGTTGAAATACAAAACTTTTACCCCCGAAAAAAAA] [-] EMBL CNS09GAD [ TGTTT GCGACCGCTTTCCGGTGGAGTTCTTCGTGCGCCAGTGCGTCGACGTGTAC GTACCCGGTTCGGGGCGGAATCGCTTGCACGGGCCGTCTACCGGACCAACACCAACTACGGTGCGCTCGATCCGGCCACCACGAACGTGCTGTACGTGCACGGCAACATCGACCCGTGGCACCGGCTGGGACTGACCGAAAGCAACGACATCCACATGCCCACCATCCTGAT ] [-] EMBL AGA284255 [ GTGTACGGTACCCGGTTCGGGGCGGAATCGCTTGCACGGGCCGTCTACCGGACCAACACCAACTACGGTGCGCTCGATCCGGCCACCACGAACGTGCTGTACGTGCACGGCAACATCGACCCGTGGCACCGGCTGGGACTGACCGAAAGCAACGACATCCACATGCCCACCATCCTGATCGACGGCACGGCCCACTGTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAGCTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTACGAACTTACTGGCGATATAGTAGATAAGGTTGAAATACAAAACTTTTACCCCCGAAAAAAAA] consensusID : consensus_9888#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 671 fasta sequence [CCGCCCACGCGT-CGGCAAGTGGAGTTTGGTCAGCAGTGGCTCGTTGTCTTC------ATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTGCATACTTAGATCGACCAAAAGTGTCCCGACATTTTGAGTGCCTGCCTTCACTCCGCGTGTGAACCTCCACGAAGCACCGCAAAATGGTCGATAAATCCGTTCTTTATCCCTTCCTTGGGGTGATGTTTCTGCTCCTCGGCGGGGCGGAGGTGTACGGTGTCCGCCGCTTTTGGCGTGGCAAAATGTTCCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACGCGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCACCGGTATTTCTGATGATCGGGGGCGAGGGTGAAGCCACGGCCCGCTGGATGCACGAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGATTTGGCCTACTTCATCGTGGCCATGAACGACAAG] [+] EMBL BM624244 [CCGCCCACGCGT CGGCAAGTGGAGTTTGGTCAGCAGTGGCTCGTTGTCTTC ATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTGCATACTTAGATCGACCAAAAGTGTCCCGACATTTTGAGTGCCTGCCTTCACTCCGCGTGTGAACCTCCACGAAGCACCGCAAAATGGTCGATAAATCCGTTCTTTATCCCTTCCTTGGGGTGATGTTTCTGCTCCTCGGCGGGGCGGAGGTGTACGGTGTCCGCCGCTTTTGGCGTGGCAAAATGTTCCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACGCGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCACCGGTATTTCTGATGATCGGGGGCGAGGGTGAAGCCACGGCCCGCTGGATGCACGAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACTAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGATTTGGCCTACTTCATCGTGGCCATGAACGACAAG] [+] EMBL BM619814 [ aCCCACGCGTCCGGCAAGTCGTGTTCGGTCAGCAGTCGCTCGTTGTCTTC ATCACCGTTCTTTGTGTCGTATCGTGTCGGCCA TTAGACCGACCAAAAGTGTCCC CATTTTGAGTGCCTGCCTTCACTCCGCGTGTG CCTCCACGTAGCACGGCAAGATGGTCGATAAATCCTTTCTTTATCCCTTCCTTGGGGTGATGTTTCTGCTCCTCGGCGGGGCGGAGGTGTACGGTGTGCGCCGCTTTTGGCGTGGCAAAATGTTTCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACACGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTACTTTAACGCGTCCGACCCGAACGCACCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCCACGGCCCGCTGGATGCACGAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGATCTGTCGACGAGCAGTCTGGCCTACCTGACCT ] [+] EMBL BM589789 [ c CGGCAAGTGGAGTTTGGTCAGCAGTGGCTCGTTGTCTTCATCATTATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTGCATACTTAGATCGACCAAAAGTGTCCC CATTTTGAGTGCCTGCCTTCAGTCCGCGTGTG CCTCCACGAAGCACGGCAAAATGGTCGATAAATCCTTTCTTTATCCCTTCCTTGGGGTGATGTTTCTGCTCCTCGGCGGGGCGGAGGTGTACGGTGTCCGTCGCTTTTGGCGTGGCAAAATGTTCCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACGCGCAAGCCGCCGTACCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGAGCAGTACTTCAACGCGTCCGACCCGAACGCACCGGTATTTCTGATGATCGGGGGCGAGGGTGAAGCCACGACCCGCTGGATGCACGAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTGTGCTTCCAGCTCGAGCACCGGTTCTACGGCAAGAGCCGCCCGACGGAGGACCTGTCGACGAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGATTTGGCCTACTTCAT ] [+] EMBL BM576405 [ ccgGCAGTGGCTCGTTGTCTTC ATCACCGTTCTTTGTGTCGTATCGTGTCGGCCATTGCATACTTAGATCGACCAAAAGTGTCCCGACATTTTGAGTGCCTGCCTTCACTCCGCGTGTGAACCTCCACGAAGCACCGCAAAATGGTCGATAAATCCGTTCTTTATCCCTTCCTTGGGGTGATGTTTCTGCTCCTCGGCGGGGCGGAGGTGTACGGTGTCCGCCGCTTTTGGCGTGGCAAAATGTTCCAACAGGATGCACCGAGTCGCTCGGAGCGCTTTCACGCGCAGGCCGCCGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGATCACAACGATCC ] consensusID : consensus_9888#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 392 fasta sequence [GGCCTCGAGGCAAGACTCGGCNNTAAGGTGTTTGNTGCAGTCGCTGTNACGGGTCAGCAGTCAGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGGCCATTAGACCGACCAAAAGTGTNCCCATTTTGAGTGCGCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCGAAGATGGTCGATAAAGTCCTTTCTTTATACCCTTCCTTGGGGTGATGTTTCTGCGTCCTACGCGCAGGGGGCGGAGAGTGTACGGTGTGCAGCCGCCTNTCTTTGGCGTGGGCAAAATGTTTCAACAGTGATGCACCGAGTCGCGTCGGAGCGCTTTNCACAACGCAGGCCGAGCGTATACCGGATCTTATGGTTCCGAGGCAGGCAGC] [+] EMBL BX469090 [GGCCTCGAGGCAAGACTCGGCNNTAAGGTGTTTGNTGCAGTCGCTGTNACGGGTCAGCAGTCAGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGGGCCATTAGACCGACCAAAAGTGTNCCCATTTTGAGTGCGCTGCCTTCACTCCGCGTGTGCCTCCACGTAGCACGGCGAAGATGGTCGATAAAGTCCTTTCTTTATACCCTTCCTTGGGGTGATGTTTCTGCGTCCTACGCGCAGGGGGCGGAGAGTGTACGGTGTGCAGCCGCCTNTCTTTGGCGTGGGCAAAATGTTTCAACAGTGATGCACCGAGTCGCGTCGGAGCGCTTTNCACAACGCAGGCCGAGCGTATACCGGATCTTATGGTTCCGAGGCAGGCAGC] consensusID : consensus_9888#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 174 fasta sequence [CCGCCCACGCGTCCGGTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAGCTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTACGAACTTACTGACTATATAGTAAATAAGGTTGAAATACAAGACTTGTACCCGCGAAGGGAAAAGCTTAAGATGAGGAGGAT] [+] EMBL BM617617 [CCGCCCACGCGTCCGGTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAGCTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTACGAACTTACTGACTATATAGTAAATAAGGTTGAAATACAAGACTTGTACCCGCGAAGGGAAAAGCTTAAGATGAGGAGGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9888#0 ------------------------------------------------------------ consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 CCGCCCACGCGTCCGTGCGGGAAAAGTATCCGTCCCTGGTGCACGGTGCGATCAGTTCCA 60 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 ------------------------------------------------------------ consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 GCGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACACGGTCACCCGGTCGC 120 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 ---------------------CCGAGGGCAGGTCCCAGAAGCAAATTCGATTAGCCCGCC 39 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 TGGAGCGCTACTCGGCTGACTGTGTGAGGGCGGTCCGGAGCGCCTTCCAGCAGGTGGAAA 180 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CGTCCGGCGGGGTCAGTGCGAGAAAGAGAAAATTGATAATAGTTATCAGCGCGGGGAGTT 99 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 CGCTGCTCAAGCACATGATCGGGCAGCGCACGCTGAACGAAAAGTTCCAGCTGTGCGATC 240 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 TGTTTAAAACAACGGTCGACCGACGGCCCTGCCGATAGTTGTTGTTTGCTGCAAGTCGTG 159 consensus_9888#2 -----------------------------------CCGCCCACGCGT-CGGCAAGTGGAG 24 consensus_9888#3 --------------GGCCTCGAGGCAAGACTCGGCNNTAAGGTGTTTGNTGCAGTCGCTG 46 consensus_9888#1 CGGTCGAGCGGTCGATCGAGAATCCGCTCGACATTGCCAACCTGTTCGAGGCGATCGCGA 300 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 TTC--GGTCAGCAGT-CGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGG 216 consensus_9888#2 TTT--GGTCAGCAGT-GGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGG 81 consensus_9888#3 TNACGGGTCAGCAGTCAGCTCGTTGTCTTCATCACCGTTCTTTGTGTCGTATCGTGTCGG 106 consensus_9888#1 GCAATTTCGCCGGCGTAGTGCAGTACAACAAGGACAACAGCCCGCACGCTACCGTGACGA 360 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 -CCATT--------AGACCGACCAAAAGTGTCCC--CATTTTGAGTGC-CTGCCTTCACT 264 consensus_9888#2 -CCATTGCATACTTAGATCGACCAAAAGTGTCCCGACATTTTGAGTGC-CTGCCTTCACT 139 consensus_9888#3 GCCATT--------AGACCGACCAAAAGTGTNCC--CATTTTGAGTGCGCTGCCTTCACT 156 consensus_9888#1 TCGACG----AGGTGTGTGACGTGATGGTGAACCAGACGATCGGGGCACCTGTGTCCCGG 416 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CCGCGTGTG--CCTCCACGTAGCACGGC-AAGATGGTCGATAAA-TCCTTTCTTTAT-CC 319 consensus_9888#2 CCGCGTGTGAACCTCCACGAAGCACCGC-AAAATGGTCGATAAA-TCCGTTCTTTAT-CC 196 consensus_9888#3 CCGCGTGTG--CCTCCACGTAGCACGGCGAAGATGGTCGATAAAGTCCTTTCTTTATACC 214 consensus_9888#1 CTGGCCGAGGTGAACCGGATACTGCTGA--AGCAGAGCAACACCACCTGTCTGGACTTTG 474 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CTTCCTTGGGGTGATGTTTCTGC-TCCTCGGCG----GGGCGGAG-GTGTACGGTGTGCG 373 consensus_9888#2 CTTCCTTGGGGTGATGTTTCTGC-TCCTCGGCG----GGGCGGAG-GTGTACGGTGTCCG 250 consensus_9888#3 CTTCCTTGGGGTGATGTTTCTGCGTCCTACGCGCAGGGGGCGGAGAGTGTACGGTGTGCA 274 consensus_9888#1 TGTACGAGAAGTCGATCGAGGAGATGCGCAACACCTCCTGGGGATCGTCCCAAGCTAGTG 534 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 -----CCGCTTTTGGCGTGG-CAAAATGTTTCAACAG--GATGCACCGAGTCGC-TCGGA 424 consensus_9888#2 -----CCGCTTTTGGCGTGG-CAAAATGTTCCAACAG--GATGCACCGAGTCGC-TCGGA 301 consensus_9888#3 GCCGCCTNTCTTTGGCGTGGGCAAAATGTTTCAACAGT-GATGCACCGAGTCGCGTCGGA 333 consensus_9888#1 GAGCCCGACAGTGGACGTACCAGACGTGCAACGAGTTTGGATTCTATCAAACGTCCAACA 594 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 GCGCTTTC-ACA-CGCAGGCCGC---CGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGAT 479 consensus_9888#2 GCGCTTTC-ACG-CGCAGGCCGC---CGTTCCGGATCTTTGGTTCGAGCAGCAGCTAGAT 356 consensus_9888#3 GCGCTTTNCACAACGCAGGCCGAGCGTATACCGGATCTTATGGTTCCGAGGCAGGCAGC- 392 consensus_9888#1 ATGCCAGCTCCG-TGTTTGGCGACCGCTTTCCGGTGGAGTTCTTCGTGCGCCAGTGCGTC 653 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTAC 539 consensus_9888#2 CACAACGATCCGACCAATGCGGCCACCTGGCAGCAGCGCTACTACGTGAACGATCAGTAC 416 consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 GACGTGTACGGTACCCGGTTCGGGGCGGAATCGCTTGCACGGGCCGTCTACCGGACCAAC 713 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 TTTAACGCGTCCGACCCGAACGCACCGGTATTTCTGATGATCGGGGGCGAGGGAGAAGCC 599 consensus_9888#2 TTTAACGCGTCCGACCCGAACGCACCGGTATTTCTGATGATCGGGGGCGAGGGTGAAGCC 476 consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ACCAACTACGGTGCGCTCGATCCGGCCACCACGAACGTGCTGTACGTGCACGGCAACATC 773 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 ACGGCCCGCTGGATGCACGAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTG 659 consensus_9888#2 ACGGCCCGCTGGATGCACGAGGGCGCCTGGATCCGGTACGCGGAAAAGCACGGCGCACTG 536 consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 GACCCGTGGCACCGGCTGGGACTGACCGAAAGCAACGACATCCACATGCCCACCATCCTG 833 consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 TGCTTCCAGCTCGAGCACCGGTTCTACG-GCAAGAGCCGCCCGACGGAGGATCTGTCGAC 718 consensus_9888#2 TGCTTCCAGCTCGAGCACCGGTTCTACG-GCAAGAGCCGCCCGACGGAGGATCTGTCGAC 595 consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ATCGACGGCACGGCCCACTGTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAG 893 consensus_9888#4 -CCGCCCACGCGTCCG---GTGCGAACATGTACGAACCGAAAGACAGTGATCCGCCACAG 56 consensus_9888#0 GAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGATTTGGCCTACTTCATCGT 778 consensus_9888#2 GAGCAGTCTGGCCTACCTGACCTCGGAACAGGCGCTCGCCGATTTGGCCTACTTCATCGT 655 consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 CTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTA--CGAACTTACTGGCGATATAGT 951 consensus_9888#4 CTGAAGCAGGCCCGGCTCGAGATCGATACGTTTATTA--CGAACTTACTGACTATATAGT 114 consensus_9888#0 GGCCATGAACGACAAGTACCAGCTCGAGCCGCACCGGCACCGGTGGATCGCGTTCGGCGG 838 consensus_9888#2 GGCCATGAACGACAAG-------------------------------------------- 671 consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 AGATAAGGTTGAAATACAAAACTTTTACCCCCGAAAAAAAA------------------- 992 consensus_9888#4 AAATAAGGTTGAAATACAAGACTTGTACCCGCGAAGGGAAAAGCTTAAGATGAGGAGGAT 174 consensus_9888#0 TTCGTACCCGGGCTCGCTGGCCGCCTGGCTGCGGGAAAAGTATCCGTCCCTGGTGCACGG 898 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ------------------------------------------------------------ consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 TGCGATCAGTTCCAGTGGGCCGCTGCTGGCGAAGATCGATTTCGTGGAGTACTACGACAC 958 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ------------------------------------------------------------ consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 GGTCACCCGGTCGCTGGAGCGCTACTCGGCCGACTGTGTGCGGGCGGTCAGGAGCGCCTT 1018 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ------------------------------------------------------------ consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CCAGCAGGTGGAAACGCTGCTCAAGCACATGATCGGGCAGCGCACGCTGAACGAAAAGTT 1078 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ------------------------------------------------------------ consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CCAGCTGTGCGATCCGGTCGAGCGGTCGATCGAGAATCCGCTCGACATTGCCAACCTGTT 1138 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ------------------------------------------------------------ consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CGAGGCGATCGCGAGCAATTTCGCCGGCGTAGTGCAGTACAACAAGGACAACAGCCCGCA 1198 consensus_9888#2 ------------------------------------------------------------ consensus_9888#3 ------------------------------------------------------------ consensus_9888#1 ------------------------------------------------------------ consensus_9888#4 ------------------------------------------------------------ consensus_9888#0 CGCTACCGTGACGATCGACG 1218 consensus_9888#2 -------------------- consensus_9888#3 -------------------- consensus_9888#1 -------------------- consensus_9888#4 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||