These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9903#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1088 fasta sequence [TACTGGTGGAC-TAGAAGGCGATTGGATCGAAGTGACAACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG-AAC-AC-AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC-AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC-CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG-AACGAACCGAGCTCATCGACCGCCAAAACACCG-AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA-GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATCTCGTACGGCTATTAGCTGCAGGCATGACTGTTAAATGTTGCCAATAGCAGAATTGAAACGCTAAATAAGAGAAGCATCCTTTCGTTCTTTTCAACTCGTCAATAAATGTATCGTTTTAAGTCTAGCAAAAAAAAAA] [+] EMBL CNS08Z4Y [TACTGGTGGAC ACCAAGGCGATTGGATCGAAGTGACAACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTAGGGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATCTCGTACGGCTATTAGCTGCAGGCATGA ] [+] EMBL CNS08QYE [ TGGTGGACATAGAAGGCGATTGGATCGAAGTGACAACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGAAAAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATCTCGTACGGCTATTAGCTGCAGGCATGACTGTTAAATGTTGCCAATAGCAGA ] [+] EMBL CNS0902C [ TAAAAGGCGATTGGATCGAAGTGACAACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATCTCACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATCTCGTACGGCTATTAGCTGCAGGCATGACTGTTAAATGTTGCCAATAGCAGAATTGAAACGCTAAATAAGAGAAGCATCCTTTCGTT ] [+] EMBL CNS08FJB [ AAGGCGATTGGATCG AGTGACAACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTACTTTTCCTCTACGGTGCTGATGGCCTCGAAACAACAAACTTGCTGGAG ] [+] EMBL CNS08VAR [ ATTGGATCGAAGTGACAACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAGCGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATCTCGTACGGCTATTAGCTGCAGGCATGACTGTTAAATGTTGCCAATAGCAGAATTGAAACGCTAAATAAGAGAAGCATCCTTTCGTTCTTTTCAACTCGTCAATAAATGTATCGTTTTAAGTCTAGCAAAAAAAAAA] [+] EMBL BX623765 [ ATGGGTGAGCGTAAACTTTGCCAGGGTACAGGATACGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGGAAAAGAACAACG ATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATTGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCTATACAGATCAATGAAGAGGACGAGCTGCCC AAAACAATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCGGCAAGCTCCCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCCCCCGCCGAGGCGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACCGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGGGCTCATCGACCGCCAAAACACCG AATCGATTGAAACGCAAGCAGCCAAATCCGTCCCATTCGTCCAAGGTag ] [-] EMBL CNS0902D [ TGAGCGTAAACTTTGCCAGGGTACAGAATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGAACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTTTCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAAAAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATC ] [+] EMBL BM590192 [ ccgGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGGAAAAGAACAACG ATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATG ] [-] EMBL CNS08VAS [ AGGGTACAGAATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACAAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGAACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTTTCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTTTCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAGCGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATC ] [+] EMBL BX621121 [ GGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGGAAAAGAACAACG ATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCTGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCTGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGGCGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCAACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCGAAACGAACCGGGCTCATCGACCGCCAAAACACCGAAATCGATTGAAACGCAAGCAGCCCAATCCGTCCCATTCGTCCAAGGTGGNCCGAAAACGGTTAGGATANGTAGCTTCCATTTGCGCCCTTTGTTGCTGCCCCNCTCCCTTG ] [+] EMBL BX620342 [ GATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCNAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGNCAAGAGGCGACG ] [-] EMBL CNS08QYF [ TAGTTAAGTTGTATCGAAAGTGAAAAAGAACAACGAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTTTCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGTTTGGGTGGTTGGCAATGTTTAACAAAATTAAAATC ] [-] EMBL CNS08Z4Z [ TTAAGTTGTATCGAAAGTGAAAAAGAACAACAAATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGAACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCCAAAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAGACAGTCGATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGAGCTCATCGACCGCCAAAACACCG AATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATC ] [+] EMBL BM603007 [ AGTGGAAAAGAACAACG ATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCC AAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCTGAGTCGGCCGCAAGCTCGCGGACGTTATCCGCTGAATC CACAGCAAGCTCCCGCACC ] [+] EMBL BX614718 [ AACG ATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCTATACAGATCAATGAAGAGGACGAGCTGCCC AAAACAATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGTGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCGGCAAGCTCCCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCCCCCGCCGAGGCGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCA ] [+] EMBL BX609335 [ TGTGTTCAAAGATGAATCGCACCGTAATTTTTATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCTATACAGATCAATGAAGAGGACGAGCTGCCC AAAACAATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCGGCAAGCTCCCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCCCCCGCCGAGGCGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACCGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAA CGGGCTCATCGACCGCCAAAACACCG AATCGATTGAAACGCAAGCAGCCAAATCCGTCCCATTCGTCCAAGGTAGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGCCAAACGGGGCGACTA GGGGGCTGGGTGGTTGGCAATG ] [+] EMBL BX609235 [ GTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCG AAC AC AACTTGCTGGAGAAAATCAACAACTATCTCCCTATACAGATCAATGAAGAGGACGAGCTGCCC AAAACAATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCGGCAAGCTCCCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCCCCCGCCGAGGCGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACCGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGGGCTCATCGATCGCCAAAACACCG AATCGATTGAAACGCAAGCAGCCAAATCCGTCCCATTCGTCCAAGGTAGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGCCAAACGGGGCGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATCTCGTACGGCTATTAGCTGCAGGCA ] [+] EMBL BX610425 [ C AACTGGCTGGAGAAAATCAACAACTATCTCCCTATACAGATCAATGAAGAGGACGAGCTGCCC AAAACAATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCGGCAAGCTCCCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGATGCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTCGATAACAGTGCCCCCGCCGAGGCGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTGAACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCGAACGAGACCGTCGGTGAATCGAGTACAAACCGAGAACCG AACGAACCGGGCTCATCGATCGCCAAAACACCG AATCGATTGAAACGCAAGCAGCCAAATCCGTCCCATTCGTCCAAGGTAGCCCGAAA ] [+] EMBL BX610429 [ AGTCGGCGCAGAAACGGTCCGGGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCGGCCGAGTCGGCGGCAAGCTCCCGGACGTTATCCGCCGAATC CACAGCAAGCTCCCGCACCAGGTCGG ] [-] EMBL CNS08FJC [ CGCAAGCAGCCAAATCCGTCTCATTCGTCCAA GTGGCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCCTTGCTGGGTCAAACGGGACGACTA GGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAAAATC ] consensusID : consensus_9903#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 445 fasta sequence [AATCGCNCGAGGNGAAGTGACACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTTGTATCGAAAAAGTGAACAAAGAAACCCAACGAAATTCGGCTCACCATGGGCAGTTTAAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAAC-AACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGC-CCAAAACTATCTGCGACGCTTGT-A-TGGA-C-AA-AATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCG] [+] EMBL AL932323 [ ATCGCNCGAGGNGAAGTGACACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTTGTATCGAAAAAGTGAACAAAGAAACCCAACGAAATTCGGCTCACCATGGGCAGTTTAAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAAC AACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGC CCAAAACTATCTGCGACGCTTGT A TGGA C AA AATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCG] [+] EMBL AL930900 [atcccccCGAGNTGAAGTGACACTTTCACAACAAAACAAATGGGTGAGCGTAAACTTTGCCAGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAG TTGTATCG AAAGTGAA AAAGAA CAACGAA TC GCTCACCATGGGCAGTTT AATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAACGAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCGCCAAAACTATCTGCGACGCTTGTCATTGGAGCTAAGAATTCTGCTCCACCATCGGCTGATCGA ] consensusID : consensus_9903#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 439 fasta sequence [GATCGCCCGAGGNNTAAACTTTGCCAGGTACGGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGGAAAAGAACAACGATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCCAAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAACTTCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCCCGGACGTTATCCGCCGAATCCACAG] [+] EMBL AL932554 [GATCGCCCGAGGNNTAAACTTTGCCAGGTACGGGATAGGCTCCATCGAGTAAATTAGTTAAGTTGTATCGAAAGTGGAAAAGAACAACGATCGCTCACCATGGGCAGTTTAATGGAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATTTTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAACAACTATCTCCCAATACAGATCAATGAAGAGGACGAGCTGCCCAAAACTATCTGCGACGCTTGTATGGACAAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTGAAACTTCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCCCGGACGTTATCCGCCGAATCCACAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9903#0 TACTGGTGGACTAGAAGGCGATTGGATCGAAGTGACAACTTTCACAACAAAACAAATGGG 60 consensus_9903#2 -----------------------------------------------------GATCGCC 7 consensus_9903#1 ----------------AATCGCNCGAGGNGAAGTGACACTTTCACAACAAAACAAATGGG 44 * * consensus_9903#0 TGAG-CGTAAACTTTGCCAGGGTACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTT-G 118 consensus_9903#2 CGAGGNNTAAACTTTGCCAGG-TACGGGATAGGCTCCATCGAGTAAATTAGTTAAGTT-G 65 consensus_9903#1 TGAG-CGTAAACTTTGCCAGG-TACAGGATAGGCTCCATCGAGTAAATTAGTTAAGTTTG 102 *** ************** *** ******************************** * consensus_9903#0 TATCGAAA--GTGAA-AAAGAA---CAACGAA---TCGCTCACCATGGGCAGTTTAA-TG 168 consensus_9903#2 TATCGAAA--GTGGA-AAAGAA---CAACGA----TCGCTCACCATGGGCAGTTTAA-TG 114 consensus_9903#1 TATCGAAAAAGTGAACAAAGAAACCCAACGAAATTCGGCTCACCATGGGCAGTTTAAATG 162 ******** *** * ****** ****** ******************** ** consensus_9903#0 GAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATT 228 consensus_9903#2 GAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATT 174 consensus_9903#1 GAGGCGTGCTGCACTGGTTTTATATGCAGGCTGTGTTCAAAGATGAATCGCACCGTAATT 222 ************************************************************ consensus_9903#0 TTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAACAACTATCTC 288 consensus_9903#2 TTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAACAACTATCTC 234 consensus_9903#1 TTCATCTACGGTGCTGATGGCCTCGAACACAACTTGCTGGAGAAAATCAACAACTATCTC 282 ************************************************************ consensus_9903#0 CCAATACAGATCAATGAAGAGGACGAGCTGCCCAAAACTATCTGCGACGCTTGTATGGAC 348 consensus_9903#2 CCAATACAGATCAATGAAGAGGACGAGCTGCCCAAAACTATCTGCGACGCTTGTATGGAC 294 consensus_9903#1 CCAATACAGATCAATGAAGAGGACGAGCTGCCCAAAACTATCTGCGACGCTTGTATGGAC 342 ************************************************************ consensus_9903#0 AAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTG 408 consensus_9903#2 AAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTG 354 consensus_9903#1 AAAATTCTGCTCCACCATCGGCTGATCGAGCAGATACAGTCGGCGCAGAAACGGTTCGTG 402 ************************************************************ consensus_9903#0 AAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCG 468 consensus_9903#2 AAACTTCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCGAGTCGGCCGCAAGCTCC 414 consensus_9903#1 AAGCTGCGGGGCGAAGAGCAGGCCCGGAACGCAACGGCTGCCG----------------- 445 ** ** ************************************* consensus_9903#0 CGGACGTTATCCGCCGAATCCACAGCAAGCTCCCGCACCATGTCGGTCGATTCCACGGAT 528 consensus_9903#2 CGGACGTTATCCGCCGAATCCACAG----------------------------------- 439 consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 GCCGTGGAAGAACCAGCCGAACGAATACAGCAGAGCAATGAAACGAACAACGAAACAGTC 588 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 GATAACAGTGCGCCCGCCGAGACGTCGAATGAGCGAGGAGCGCAGGAGGAGCCCCAGGTG 648 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 AACGACAGCACCAGCCAAGATTCGTCAAGCCAAGAGGCGACGAGCAGCAGCAGTACCGCG 708 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 AACGAGACAGTCGGTGAATCGAGTACAAACCGAGAACCGAACGAACCGAGCTCATCGACC 768 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 GCCAAAACACCGAATCGGTTGAAACGCAAGCAGCCAAATCCGTCTCATTCGTCCAAGGTG 828 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 GCCCGAAAACGGTTAGGATAGGTAGCTTCAATTTGCGCCCTTTGTTGCTGCCCCACTCCC 888 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 TTGCTGGGTCAAACGGGACGACTAGGGGGCTGGGTGGTTGGCAATGTTTAACAAAATTAA 948 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 AATCTCGTACGGCTATTAGCTGCAGGCATGACTGTTAAATGTTGCCAATAGCAGAATTGA 1008 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 AACGCTAAATAAGAGAAGCATCCTTTCGTTCTTTTCAACTCGTCAATAAATGTATCGTTT 1068 consensus_9903#2 ------------------------------------------------------------ consensus_9903#1 ------------------------------------------------------------ consensus_9903#0 TAAGTCTAGCAAAAAAAAAA 1088 consensus_9903#2 -------------------- consensus_9903#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||