These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9920#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 786 fasta sequence [CAAGTTTTAATCTGTTGCGTTGTGTCGATATGATCAGTAAGTCATTATCCG-AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT-GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC-GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT-GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAACCGTGTGTGGT] [+] EMBL CNS08V6N [CAAGTTTTAATCTGTTGCGTTGTGTCGATATGATCAGTAAGTCATTATACG TGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTTTGGGGAGGAGATGGTATTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTTTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTCACTGCAGTAAGGCTGGGCGACGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGA ] [+] EMBL BM614225 [ ccgGTGTCGATATGATCAGTAAGTCATTATACGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGG ] [+] EMBL BM595798 [ CCGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGAAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGCGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGC ] [+] EMBL BM586143 [ CCG AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGT ] [+] EMBL BM647063 [ ccgcgc AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGAAGGAATGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGCGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGC ] [+] EMBL BM656353 [ ccgcgc AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGACAAACATACGATCTGTCAA ] [+] EMBL BM602772 [ ccgGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGGTTTGCTT GGTAACCTGATCACAGCTTACGGAGGC ] [+] EMBL BM610655 [ ccgGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGG ] [+] EMBL BM600132 [ ccgGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCT ] [+] EMBL BM610184 [ ccgAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTTGGGTAAC ] [+] EMBL BM592237 [ ccgAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGC ] [+] EMBL BM580420 [ ccgAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGAAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGCGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACT ] [+] EMBL CNS08UYW [ AGCTCTACTATGTGGAATGATTGTGTGAAA TTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTCGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGA GAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGAT ] [+] EMBL CNS094MF [ CTACTATGTGGAATGATTGTCTG AACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATAATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTTTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTCACTGCAGTAAGGCTGGGCGACGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAACCGTGTGTGGT] [+] EMBL BX606576 [ GGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGTTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCCAACCGTGTGTGGT] [+] EMBL BX628548 [ GCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTTTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTCACTGCAGTAAGGCTGGGCGACGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAACCGTGTGTGGT] [+] EMBL BX605223 [ GAGTGACCGAACGTTGTCGGAAGGCCCTTGATCTGTACCGAATGAGAAAAACATACGAACTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTG GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCCGTTACTGAAGAAGGCTATACTGAT ] consensusID : consensus_9920#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 691 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCG--GCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT-AAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACAGCTTACGG] [+] EMBL BM642010 [CCGCCCACGCGTCCGCCCACGCGTCCGGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACAGCTTACGG] [+] EMBL BM656854 [CCGCGGACGCGTGGGCGGACGCGT G G G AGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTTGG ] [+] EMBL BM575935 [ CCGCCCACGCGTCCG GCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCT ] [+] EMBL BM582611 [ CCGCGGACGCGT G G G AGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCC ] [+] EMBL BM624001 [ CCG GCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATT ] consensusID : consensus_9920#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence [GGGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGGCAAGAGACTTAATTTTGCTTGATTCAAATATTACTGCGAAGTAATAGTGTTTTGTTCTCTTCAGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGG] [+] EMBL BX602964 [GGGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGGCAAGAGACTTAATTTTGCTTGATTCAAATATTACTGCGAAGTAATAGTGTTTTGTTCTCTTCAGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9920#0 CAAGTTTTAATCTGTTGCGTTGTGTCGATATGATCAGTAAGTCATTATCCGAGAATAGTG 60 consensus_9920#1 ------------------------------CCGCCCACGCGTC--CGCCCACGCGTCCGG 28 consensus_9920#2 ----------------------------------------------GGGCA-GAATAGTG 13 * * * * consensus_9920#0 CAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGG 120 consensus_9920#1 CAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGG 88 consensus_9920#2 CAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGG 73 ************************************************************ consensus_9920#0 ACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACG---------------------- 158 consensus_9920#1 ACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACG---------------------- 126 consensus_9920#2 ACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGGCAAGAGACTTAATTTTGCTTG 133 ************************************** consensus_9920#0 -------------------------------------------ATTCCGAAGATGTCTCG 175 consensus_9920#1 -------------------------------------------ATTCCGAAGATGTCTCG 143 consensus_9920#2 ATTCAAATATTACTGCGAAGTAATAGTGTTTTGTTCTCTTCAGATTCCGAAGATGTCTCG 193 ***************** consensus_9920#0 TTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAA 235 consensus_9920#1 TTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAA 203 consensus_9920#2 TTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAA 253 ************************************************************ consensus_9920#0 CTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGT 295 consensus_9920#1 CTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGT 263 consensus_9920#2 CTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGT 313 ******************************************************** *** consensus_9920#0 CGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTA 355 consensus_9920#1 CGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTA 323 consensus_9920#2 CGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTA 373 ************************************************************ consensus_9920#0 AAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAG 415 consensus_9920#1 AAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAG 383 consensus_9920#2 AAACGTGAAGATGCTGGACGATATGATCTATGGGG------------------------- 408 *********************************** consensus_9920#0 GCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCG 475 consensus_9920#1 GCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCG 443 consensus_9920#2 ------------------------------------------------------------ consensus_9920#0 GAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGT 535 consensus_9920#1 GAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGT 503 consensus_9920#2 ------------------------------------------------------------ consensus_9920#0 GTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTG 595 consensus_9920#1 GTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTG 563 consensus_9920#2 ------------------------------------------------------------ consensus_9920#0 TACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAA 655 consensus_9920#1 TACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAA 623 consensus_9920#2 ------------------------------------------------------------ consensus_9920#0 TCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACA 715 consensus_9920#1 TCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACA 683 consensus_9920#2 ------------------------------------------------------------ consensus_9920#0 GCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAA 775 consensus_9920#1 GCTTACGG---------------------------------------------------- 691 consensus_9920#2 ------------------------------------------------------------ consensus_9920#0 CCGTGTGTGGT 786 consensus_9920#1 ----------- consensus_9920#2 ----------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||