These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9927#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1172 fasta sequence [AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG-TTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCTGCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCATCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGGACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAAAATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTTGTTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTTAATAAATCACGCAACAGCCTTCACAAAACAGCC] [+] EMBL CNS08WZV [AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCATCACAGCGTTCCACAGTGCAGGATAACAGTTCGCAAGGAGCAG TTTTTTATAATTCACCAGTGAAACTTAAACTATACAGAATAGAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAATGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAGTAGACGCTTCCAGTGAGGA CGGTTGAGGGGACCGGAGGGTGACAAAGTGCGCGAGATCTGCGGGGTCTGTGATATTTATTAGCTA ] [+] EMBL CNS09KK4 [ CCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCATCACAGCGTTCCACAGTGCAGGATAACAGTTCGCAAGGAGCAG TTTTTTATAATTCACCAGTG AACTTAAACTATACAGAATAGAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAATGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAGTAGACGCTTCCAGTGAGGA CGGTTGAGGGGACCGGA GGTGACAAAGTGCGCGAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCTGCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCATCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGGACGGACGGACCATGATCGCCTAATGATGGTCGGTT ] [+] EMBL BM651669 [ ccgGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAA ] [+] EMBL BM612977 [ CCGAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGA ATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAAGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTT ] [+] EMBL BM630686 [ ccgCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAAGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGAT ] [+] EMBL BM622043 [ CCGGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACC ] [+] EMBL BX606689 [ CAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGTTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGTATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAG ] [+] EMBL BM655527 [ ccgACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAAGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCTACCCAT ] [+] EMBL BM650510 [ ccgGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCG ] [+] EMBL BM636536 [ ccgGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGC ] [+] EMBL BM627094 [ ccgGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGAATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCT ] [+] EMBL BM640471 [ CCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACAAGACGAGCAACGGCATCCGGGCCGATCACCGCGGCTTCCTGAAGAACCCGGTCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCTTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGG ] [+] EMBL BX609495 [ GCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGTTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCAAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGACCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTAAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTGATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCC ] [-] EMBL CNS09KK5 [ CATATCCCAGCCGCCCCACGGGTCAACCCGCGCTATCCCGGCCAGTACCAGTAGACGCTTCCAGTGAGGA CGGTTGAGGGGACCGGAGGGTGACAAAGTGCGCGAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTA CCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCTG TCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCATCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGGACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAAAATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTTGTTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTTAATAAATCACGCAACAGCCTTCACAAAACAGCC] consensusID : consensus_9927#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 672 fasta sequence [CCGCGGACGCGTGG------GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG--TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC-GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA-CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCC] [+] EMBL BM633940 [CCGCGGACGCGTGG GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTTT T ATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCC] [+] EMBL BM627076 [CCGCGGACGCGTGGGATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGCACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTC ] [+] EMBL BM641751 [CCGCGGACGCGTGG GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGCACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTAC ] [+] EMBL BM597025 [CCGCGGACGCGTGGGCCA GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTTT T ATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCG ] [+] EMBL BX617736 [ GCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAATAGTTTGCAAGGAGCAGTTTTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCTGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACACTCCCAGTAAGGACCGAGTTGAGGGGACCCGGA GGTGACAAAGCGCGCAAGATCTGCGGGGTCTGT ] [+] EMBL BM654523 [ ccgGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCTGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGCACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTAAAACGCCGTA ] [+] EMBL BM641436 [ ccgGCAGGATAACAGTTTGCAAGGAGCAG TTTTTTT T ATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAA ] [+] EMBL BX607909 [ CGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGGTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCC ] consensusID : consensus_9927#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence [CCGGCACAGCATCGCAGCATCAGCACCACAGCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCTACCCATTTCCATACTGATCGG] [+] EMBL BM638838 [CCGGCACAGCATCGCAGCATCAGCACCACAGCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCTACCCATTTCCATACTGATCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9927#0 AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTT 60 consensus_9927#1 ---------CCGCGGACGCGTG---GGTGCACAGCATCGCAGCATCAGCACCACAGCGTT 48 consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 CCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTT-ATAATTCACCAGTGAAACTT 119 consensus_9927#1 CCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTT 108 consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 AAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCG 179 consensus_9927#1 AAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCG 168 consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 CTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTG 239 consensus_9927#1 CTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTG 228 consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 GTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGT 299 consensus_9927#1 GTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGT 288 consensus_9927#2 -----------------------------CCGGCACAGCATCGCAGCATCAGCACCACA- 30 * ** * * * * * * * * consensus_9927#0 ACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGA 359 consensus_9927#1 ACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGA 348 consensus_9927#2 GCGTCC---GCTGCCCATCCCGCTGCGGAATCCGGGCG----TGTACGGCTTCCTGAAGA 83 *** *** * * ** *** ******** * ************** consensus_9927#0 ACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGG 419 consensus_9927#1 ACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGG 408 consensus_9927#2 ACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGG 143 ************************************************************ consensus_9927#0 ACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTG 479 consensus_9927#1 ACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTG 468 consensus_9927#2 ACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTG 203 ************************************************************ consensus_9927#0 CGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGC 539 consensus_9927#1 CGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGC 528 consensus_9927#2 CGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGC 263 ************************************************************ consensus_9927#0 TCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGG 599 consensus_9927#1 TCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGG 588 consensus_9927#2 TCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGG 323 ************************************************************ consensus_9927#0 TCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTG 659 consensus_9927#1 TCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTG 648 consensus_9927#2 TCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTG 383 ************************************************************ consensus_9927#0 AAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTC 719 consensus_9927#1 AAACGCCGTAATGATATGATTGCC------------------------------------ 672 consensus_9927#2 AAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTC 443 ************************ consensus_9927#0 CCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAAT 779 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 CCAGCTACCCATTTCCATACTGATCGG--------------------------------- 470 consensus_9927#0 AGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTC 839 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 TGCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCA 899 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 TCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCG 959 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 GACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAA 1019 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 AATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTT 1079 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 GTTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTT 1139 consensus_9927#1 ------------------------------------------------------------ consensus_9927#2 ------------------------------------------------------------ consensus_9927#0 AATAAATCACGCAACAGCCTTCACAAAACAGCC 1172 consensus_9927#1 --------------------------------- consensus_9927#2 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||