These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9951#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1283 fasta sequence [CCGCCCACGCGTCCGTTTTAATTTTAGAAAAAGAAATGATGAATTTTATTTTTG-GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT-AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG-CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT-C-CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA-AGGCTGACAGCCCAAGTTGGAACCGAAC-GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA-GGGAATCCTCCGTTACAACCAAAGCCGCAG-GTG-TGGCAGCA-CGA-AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCG-ATGAACTTGGAAGAGAGT-GGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCC-AAAATGCCTTGTAATTTTCTATTGCTGTTTTTCTTGCCAGAAGTATGCAGAATAACCCCAG] [+] EMBL BM617287 [CCGCCCACGCGTCCGTTTTAATTTTAGAAAAAGAAATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGC ] [+] EMBL BM600350 [CCGCCCACGCGTCCG ATTTTAGAAAAAGAAATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGGCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAA ] [+] EMBL CNS099EE [ tTTTTTTTTTTAG AAAAGTTATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTAAAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATA ] [+] EMBL BM640181 [ TAGAAAAAGAAATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGGTGGGAACGAAC GGGCCTCCACTGACC ] [+] EMBL BM614114 [ TACAAAAAGAAATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAACACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTCGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C TTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCCTGGCA ] [-] EMBL BM634592 [ AGAAAAAGAAATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATcgg ] [+] EMBL CNS092JG [ AATGATGAATTTTATTTTTG GGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGCGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGGGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCGCCCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGAAAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAA ] [+] EMBL CNS09OAF [ ATTTTTGAGGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCAGGGGAATCCTCCGTTACAACCAAAGCCGCAGTGTG GGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAATTAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTAAAAAAATTTGTCCGC ] [+] EMBL CNS09QTB [ TTTG GGATGTAAAAG AAGAAACATTTTGTGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTTCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCAGGGGAATCCTCCGTTACAACCAAAGCCGCAG GTGTTGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACAAGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAATTAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGAT ] [-] EMBL BX618534 [ AGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGT AAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCT ] [-] EMBL BM655288 [ CGGTAAAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTTTTCACCGCGAAGGATCCTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTCGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCT C TTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCCTGGCATTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCcgg ] [-] EMBL BM580332 [ GCTGTTCCAGGAGTTAGCAATCACCCAATACTTGGTGCCA TTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCG CCGAGCATTTTGCCCGTCACATGCTGATAAACCCCCTCC CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGcgg ] [-] EMBL BM652036 [ CCCGTCACATGCTGATAAACCCCCT CTTTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCCTGGCATTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGcgg ] [-] EMBL CNS09QTA [ GCTGATAAACCCCCT C CTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAAGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCG ATGAACTTGGAAGAGAGT GGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCC AAAATGCCTTGTAA TTCTATTGCTGTTTATC ] [-] EMBL BM606944 [ AGTGCAGCAAATCTTCATAAACGGTAAACGCACCTTCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCCTGGCATTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGATCGTCACCATCGGTCAGATCGTGCACGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTAACgg ] [-] EMBL CNS092JF [ TTCGTGGCGAGCGAACGAGTAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGAACTTCTTAACACACTTTGGCGTCTTGCCACCTTCGCCCTAACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGAAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCG ATGAACTTGGAAGAGAGT GGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGACCACCAGATGGAACAGCATTTTCCC AAAATGCCTTGTAATTTTCTATTACTATTTTTCTTGCCAGAAGTATGCAGAATAACCCCAG] [-] EMBL BX616469 [ CGTTTATCTTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGC ] [-] EMBL BM615856 [ ATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCACTTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTA AGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCcgg ] [-] EMBL CNS09OAE [ GGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTGACATGATGTTCGCACGGCGCAATGGCGTATAGGCTGACAGCCCAAGTTGGAACCGAAC GGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCATCGATAACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCGTATGAACTTGGAAGAGAGTGGGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCC AAAATGCCTTGTAATTTTCTATTGCTGTTTTTCTTGC ] [-] EMBL BX602110 [ A AGGCTGACAGCCCAAGTTGGAACCGAACGGGGCCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCA GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGCCGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCG ATGAACTTGGAAGAGAGT GGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCC AAAATGCCTTGTAATTTTCTATTGCTGTTTTTCTT ] [-] EMBL BX605408 [ GGGAATCCTCCGTTACAACCAAAGCCGCAG GTG TGGCAGCA CGA AACGAGATCTTCGGACGAAAAACGGAAATGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAATGCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGCCACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGGATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCG ATGAACTTGGAGGAGAGT GGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCCAAAAATGCCTTGTAATTTTCTATTGCTGTTTTT ] [-] EMBL CNS099ED [ GGATGAACGCCCATCAGCCCTCGGATGTAGGTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTGATTTCTTCG ATGAACTTGGAAGAGAGT GGGTACTTCTTACTACCACCAGCGGCCGCATTCGTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCC AAAATGCCTTGTAATTTTCTATTGCTGTTTTTCTTGCAAGAAGTATGCAAAATGATTCCAG] consensusID : consensus_9951#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 414 fasta sequence [CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTACAAAAAGAAATGATGAATTTTATTTTTGGGATGTAAAAGAAAGAAACATTTTGGGGATTGTATTACAACAGTCTCTTGTACCTAACACGCTGTTTTGCGCTGGGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGTAAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTCGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCGCCGAGCATTTTG] [+] EMBL BM619624 [CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTACAAAAAGAAATGATGAATTTTATTTTTGGGATGTAAAAGAAAGAAACATTTTGGGGATTGTATTACAACAGTCTCTTGTACCTAACACGCTGTTTTGCGCTGGGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGTAAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTCGTGCCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCGCCGAGCATTTTG] [+] EMBL BM618717 [ TAGAAAAAGAAATGATGAATTTTATTTTTGGGATGTAAAAGAAAGAAACATTTTGGGGATTGTATTACAACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGGGTTTGCTTGTTTACCTCGTTTAAGCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTCGGTAAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTGAAGAATCCATTATCGCCCCAGTCGCTGTTCCA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9951#0 ----------------------------CCGCCCACGCGTCCGTTTTAATTTTAGAAAAA 32 consensus_9951#1 CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTACAAAAA 60 * *********** ***** consensus_9951#0 GAAATGATGAATTTTATTTTTGGGATGTAAAAGAAAGAAACATTTTGTGGATTGTATTAC 92 consensus_9951#1 GAAATGATGAATTTTATTTTTGGGATGTAAAAGAAAGAAACATTTTGGGGATTGTATTAC 120 *********************************************** ************ consensus_9951#0 AACAGTCTCTTGTACCTAATACGCTGTTTTGCGCTGTGTTTGCTTGTTTACCTCGTTTAA 152 consensus_9951#1 AACAGTCTCTTGTACCTAACACGCTGTTTTGCGCTGGGTTTGCTTGTTTACCTCGTTTAA 180 ******************* **************** *********************** consensus_9951#0 GCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTC 212 consensus_9951#1 GCCGGAATGTACTTAACCCCTTTCCTTCGATGCGCATTGCAGCCAATCGATTACAGCTTC 240 ************************************************************ consensus_9951#0 GGTAAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTG 272 consensus_9951#1 GGTAAACCAGCCGAGATGGAGCTTTCGATACCGAGATGGTCTTCACCGCGAAGGATCTTG 300 ************************************************************ consensus_9951#0 AAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTGGTG 332 consensus_9951#1 AAGAATCCATTATCGCCCCAGTCGCTGTTCCAGGAGTTAGCAATCAACCAATACTTCGTG 360 ******************************************************** *** consensus_9951#0 CCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCGCCGAGCATTTTGCCCGTC 392 consensus_9951#1 CCATTTTCAACGCCCCAGCCGAGAATTCGAATCGCATGACCGCCGAGCATTTTG------ 414 ****************************************************** consensus_9951#0 ACATGCTGATAAACCCCCTCCTTGTAGTGCAGCAAATCTTCATAAACGGTAAACGCACCT 452 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 TCTACCGGTCCGTTCGTCATGATTTCCTTCTGGATCTGTGCTTCGTGGCGAGCGATCGAG 512 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 TAGGAGGAAGCACCGAAGCGTTTATCCTTCTGGTAAGGCACGTTGTAGCTTTCTTGGCAC 572 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 TTCTTTACACACTTTGGCGTCTTGCCACCTTCGCCCTCACACGAAGGGCGCGTTCCGTTG 632 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 ACATGATGTTCGCACGGCGCAATGGCGTAAGGCTGACAGCCCAAGTTGGAACCGAACGGG 692 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 CCTCCACTGACCAGACCCTTCCGGACCCAATAGCTCCAGGCAGCGCCAGGGAATCCTCCG 752 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 TTACAACCAAAGCCGCAGGTGTGGCAGCACGAAACGAGATCTTCGGCCGAAAAACGGAAA 812 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 TGGATCTTGCCTCCGGAGGCAACGCACACCCGATCGGACATGGCCTCCACAGCACCGAAT 872 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 GCCCAGCAAGAGCCACACGAGCCCTGATCGCGAATTTCCCGGATCGTCGGACAGTTGGGC 932 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 CACTGTTCGCGAGAGTCAAAGTTCTCCGGTAGTTCGTCACCATCGGACAGATCGTGCAGG 992 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 ATTTCAGGCTCGCGGAATTTGTCCGCATCGGGATGAACGCCCATCAGCCCTCGGATGTAG 1052 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 GTAAGCGACGTGTCGGGGTGAAAGTTTTGACCAGCACGCCATGTTGTAGCTTTGGTATTG 1112 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 ATTTCTTCGATGAACTTGGAAGAGAGTGGGTACTTCTTACTACCACCAGCGGCCGCATTC 1172 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 GTGCCGACAGCGGCAAGCGCTATGAGCACCAGATGGAACAGCATTTTCCCAAAATGCCTT 1232 consensus_9951#1 ------------------------------------------------------------ consensus_9951#0 GTAATTTTCTATTGCTGTTTTTCTTGCCAGAAGTATGCAGAATAACCCCAG 1283 consensus_9951#1 --------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||