These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9968#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1467 fasta sequence [TTTTTTTTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGTAAAA-ACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC-TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG-TCGCCATCAGCGAAATCATGGTC-GAGTACACCTCGAT--CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC-TCCTCGTAAAACGTTA-CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC-CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA-TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCTTGCTTTTTTTTG] [+] EMBL AGA281405 [TTTTTTTTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGTTAAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGACCGCTCACGCCCTCGCTGGCCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGCACGACCGAGTAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTCGAGATGCCGCGCACAAACAGTTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAACGCCCACACCGGCAACATTCGGCCCTT ] [+] EMBL CNS09AZG [ TTTTATGTGGTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCATTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGC ] [+] EMBL AGA280163 [ TTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGT AAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTAC ] [+] EMBL AGA283984 [ TTTTTTTTAAGATTTAAACAAACATA TTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAATAAA ACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGCTTTGAT ACTGCCACGTGCGCCGCAAACTGGAGCATCATCGCGC ] [+] EMBL CNS08Q7J [ taTTTTTAAGATTTAAACAAGCATATTTTTTCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAAagt ] [+] EMBL CNS09I4J [ AAGA TTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTAC ACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTTCGCGTTCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGCACACCTCGAT CACCTGGCTCTGGGGGGGGAAATCGCGCGTCCG ] [+] EMBL CNS08LGH [ AAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGT AAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGACCGCTCACGCCCTCGCTGGCCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGCACGACCGAGTAGCCCGAGTCCATTTTGTCG ] [+] EMBL CNS08G2R [ ATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGT AAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGACCGCTCACGCCCTCGCTGGCCAGCGTTTt ] [-] EMBL CNS08Q7I [ TCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATAACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGGGGCG TCCACAAagt ] [+] EMBL CNS09M7S [ TCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAG ] [-] EMBL BX606101 [ TTGCCCTCCAGCTTGT AAACTCACCCACCTTGGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCA ] [-] EMBL BM628419 [ GGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCGTTCGCCATCAGCGAAATCATGGTCTGAGTACACCTCGATCCCCCCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGCTTCCTCGTAAAACGTTACCCCGTCTGCACATGATCCTGGTCGAGATGCCGCGCACAAACAGTTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAACGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGcgg ] [-] EMBL CNS09AZF [ AAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAATTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCTTGCTTTTTTTTG] [-] EMBL CNS09M7R [ CATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTCTCGAATTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGC ] [-] EMBL CNS08LGG [ TATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAACGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCGGCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGATTTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAA TTTGCACT GCCCTAGTTTT ] [-] EMBL AGA283018 [ ATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTTGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGG ] [-] EMBL BM637350 [ CTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCcgg ] [-] EMBL CNS09I4I [ GAGCGATGCAGAGTAAAACGGAACCACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTTCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGTGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAATTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTT ] [-] EMBL BM642037 [ CAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCcgg ] [-] EMBL BX603644 [ CACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCTTGCTTTTTTTTG] [-] EMBL AGA285280 [ tTGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACATGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTATGCAGTGGCAGCGTAAGATCGCGCTC CGAATTGATGAACTGATACGGCGCATCGTACAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTAC ] [-] EMBL CNS08G2Q [ GCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCC ] consensusID : consensus_9968#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence [CCTNCAGCATCAAGTGCGCGCCGAAACCCTTGTNCAAGGACCGCTCACGCCCTCGTTGCCCAGCGTCTATGCCGGTACCAGTCGACCACCTCACGNTCNGTAGCTGGTCAGAATCGGCACAGACCGAGNTAGCCCGAGTCCAGATTGCTCGATGATTNTGCGCAGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACAGGGTAGAAAATCATCTCCGTCGCCATCAGCGAAATTCATGCGTCGAGTACACCTCGATCACCTGGCTCTGGCCAGGCGAAATCGCAGCGTCCGAGCGCCGCGCCGCTCNCTCGTAAAACGTTACCCGTCTGCACATGATCCTGGTCGAGATGCCAGCGCACAAACAGTTGGCAAACGTAGTTTCGACAGACCGAGCGATATGCTCGGCCACTACCAACGCCCACACCAGGCAACATTCGGCCCTTCTGCGGGACAGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACNAAACCTCGGGGAAT] [-] EMBL AL930434 [CCTNCAGCATCAAGTGCGCGCCGAAACCCTTGTNCAAGGACCGCTCACGCCCTCGTTGCCCAGCGTCTATGCCGGTACCAGTCGACCACCTCACGNTCNGTAGCTGGTCAGAATCGGCACAGACCGAGNTAGCCCGAGTCCAGATTGCTCGATGATTNTGCGCAGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACAGGGTAGAAAATCATCTCCGTCGCCATCAGCGAAATTCATGCGTCGAGTACACCTCGATCACCTGGCTCTGGCCAGGCGAAATCGCAGCGTCCGAGCGCCGCGCCGCTCNCTCGTAAAACGTTACCCGTCTGCACATGATCCTGGTCGAGATGCCAGCGCACAAACAGTTGGCAAACGTAGTTTCGACAGACCGAGCGATATGCTCGGCCACTACCAACGCCCACACCAGGCAACATTCGGCCCTTCTGCGGGACAGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACNAAACCTCGGGGAAT] consensusID : consensus_9968#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence [GCACGCTTGCCCGATACCCTTGCCACAGCGGTCCGTTAACGCCCCTGGCCCGCTGGTGCCAGATGCACAATCGACCGTCAGCCAGGGCTGATCGGCACGACGCTGGTACCGCCGGGCGGTGTCGATGCACCTGGCACTGGCGCCGCAGCACCGTAGATACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCACGTGGCAGCGTAAGATCGCGCTCCCGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGATTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTGTGCACTGGCCCTAGTTTTTTGCCNCGTGCCGATTCTGCC] [-] EMBL BX468892 [GCACGCTTGCCCGATACCCTTGCCACAGCGGTCCGTTAACGCCCCTGGCCCGCTGGTGCCAGATGCACAATCGACCGTCAGCCAGGGCTGATCGGCACGACGCTGGTACCGCCGGGCGGTGTCGATGCACCTGGCACTGGCGCCGCAGCACCGTAGATACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCACGTGGCAGCGTAAGATCGCGCTCCCGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGATTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTGTGCACTGGCCCTAGTTTTTTGCCNCGTGCCGATTCTGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9968#0 TTTTTTTTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACG 60 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 CGCAATGAGTAAAAACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGC 120 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 TAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACT 180 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 CCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACT 240 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 TGCCCAGCTTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCT 300 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 TGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCT 360 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 CGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGC 420 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 GCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG 480 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 TCGCCATCAGCGAAATCATGGTCGAGTACACCTCGATCACCTGGCTCTGGGCGGCGAAAT 540 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 CGCGCGTCCGAGCGCCGCGCCGCTCCTCGTAAAACGTTACCCGTCTGCACATGATCCTGG 600 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 TTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCG 660 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 GCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCA 720 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 GGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGC 780 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 TCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGC 840 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 ATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTG 900 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ------------------------------------------------------------ consensus_9968#0 GCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAA 960 consensus_9968#2 ------------------------------------------------------------ consensus_9968#1 ---------------------------------------------------CCTNCAGCA 9 consensus_9968#0 GCACGCTG---CCGATACCCTT-CCACAGCG--TCGT-AACGCCCTG-----CCGCTG-- 1006 consensus_9968#2 GCACGCTTGC-CCGATACCCTTGCCACAGCGGTCCGTTAACGCCCCTG--GCCCGCTG-- 55 consensus_9968#1 TCAAGTGCGCGCCGAAACCCTTGTNCAAGGA--CCGCTCACGCCCTCGTTGCCCAGCGTC 67 ** * **** ****** ** ** ****** ** * consensus_9968#0 -GTGC-AGATGCA--CAATC-ACCGGCAGCAGG-G--TGATCGGCA-CGACG-TGGTACC 1056 consensus_9968#2 -GTGCCAGATGCA--CAATCGACCGTCAGCCAG-GGCTGATCGGCA-CGACGCTGGTACC 110 consensus_9968#1 TATGCCGGTACCAGTCGACCACCTCACGNTCNGTAGCTGGTCAGAATCGGCACAGACCGA 127 *** * ** * * * * * * ** ** * * ** * * consensus_9968#0 GCCGGGCGGTGT-GATGC-ACCTGGCACTGGCGCCGCAGCACC--AAAAACGGATGGCAT 1112 consensus_9968#2 GCCGGGCGGTGTCGATGC-ACCTGGCACTGGCGCCGCAGCACCGTAGATACGGATGGCAT 169 consensus_9968#1 GNTAGCCCGAGTCCAGATTGCTCGATGATTNTGC-GCAGTGCCCTGCAGCTGGATC-CGG 185 * * * * ** * * * * ** **** ** * **** * consensus_9968#0 AGCAGGTTCTCCGTAATCAGGCTGATGAGGT-----TAACGCTCGCACCGAGATATTTCC 1167 consensus_9968#2 AGCAGGTTCTCCGTAATCAGGCTGATGAGGT-----TAACGCTCGCACCGAGATATTTCC 224 consensus_9968#1 TGCAGGATCGTCTCGAACAGGGTAGAAAATCATCTCCGTCGCCATCAGCGAAATTCATGC 245 ***** ** * * **** * * *** ** *** ** * * consensus_9968#0 GCAGCG-ATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAAC-GTTTTTGTGCTTCTG 1225 consensus_9968#2 GCAGCG-ATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAAC-GTTTTTGTGCTTCTG 282 consensus_9968#1 GTCGAGTACACCTCGATCACCTGGCTCTGGCCAGGCGAAATCGCAGCGTCCGAGCGCCGC 305 * * * * * ** ** **** * * * * * * * * ** * consensus_9968#0 CA-GTGGCAGCGTAAGATCGCGCTCC-GAGTTGATGAACTGATACGGCGCATCGTC-CAG 1282 consensus_9968#2 CACGTGGCAGCGTAAGATCGCGCTCCCGAGTTGATGAACTGATACGGCGCATCGTC-CAG 341 consensus_9968#1 GCCGCTCNCTCGTAAAACGTTACCCGTCTGCACATGATCCTGGTCGAGATGCCAGCGCAC 365 * ***** * * * * **** * ** * * ** consensus_9968#0 GGTGGATTTGTAAGCGGAC-----AGGAACCGTGCATTAT-CTAACTCATCCTCATCTTC 1336 consensus_9968#2 GGTGGATTTGTAAGCGGAC-----AGGAACCGTGCATTAT-CTAACTCATCCTCATCTTC 395 consensus_9968#1 AAACAGTTGGCAAACGTAGTTTCGACAGACCGAGCGATATGCTCGGCCACTACCAACGCC 425 ** * ** ** * * **** ** *** ** ** ** * * consensus_9968#0 CAGGT---ACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACAT 1393 consensus_9968#2 CAGGT---ACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACAT 452 consensus_9968#1 CACACCAGGCAACATTCGGCCCTTCTGCGGGACAGCTCCAGGACAGCA-GGCGGCT-CGC 483 ** * * * * * * * * ** * * ***** * consensus_9968#0 CTATTTGCTAAACAAATCCTAGATATTT--TTGCACAATTTTGCACTGGCCCTAGTTTTT 1451 consensus_9968#2 CTATTTGCTAAACAAATCCTAGATATTT--TTGCACAATTGTGCACTGGCCCTAGTTTTT 510 consensus_9968#1 TCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGT 543 * ** **** *** * ** * * * * * ** ** * * consensus_9968#0 TGCTTGCTTTT--TTTTG---------------------------- 1467 consensus_9968#2 TGCCNCGTGCCGATTCTGCC-------------------------- 530 consensus_9968#1 TTCGACGAGCG-ATGCAGAGTAAAACGGAACNAAACCTCGGGGAAT 588 * * * * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||