cluster # 9972

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Anopheles gambiae
cluster # 9972 cluster # 9972 Sequences # 24 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9972#0 length = 742 sequences # 23

consensus_9972#1 length = 691 sequences # 1

consensusID : consensus_9972#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 742
fasta sequence

                              [CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG----GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA--GTG--TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC-GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA-CCTGCACAACGTCGACTGTGGCGACCGCA-CCCAGCTAGAACCA-CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTG]

[+] EMBL BM634870             [CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGA   GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM629698             [            CCGCCCACGCGTCCGCCCACGCGTCCG    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTG  ACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCTTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA C                                                                                                                         ]
[+] EMBL BM623889             [                        CCGCCC CGCGTCCG    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA  GTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCA    AAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTAC     ]
[+] EMBL BM657294             [                        CCGCGGACGCGTGGGGGAAGTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGG                          ]
[+] EMBL BM624995             [                        CCGCCCACGCGTCC             GCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTG  ACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCTTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGG                ]
[+] EMBL BM634187             [                        CCGCGGACGCGT  G    GGTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAA                                 ]
[+] EMBL BM621993             [                                    CCGA   GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTG]
[+] EMBL BM635171             [                                    CCG    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATT AACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCA                                                    ]
[+] EMBL BM648346             [                                    CCG    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTG  ACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCTTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTG                                                ]
[+] EMBL BM618900             [                                    CCG    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA  GTGTATTGGTTGGTGCGGTTTGTGATACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCA    AAGCCCTGTTGGTGTGGCAGT AAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTG                                         ]
[+] EMBL BM575343             [                                    CCG    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA  GTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCA    AAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATG                                           ]
[+] EMBL BM651720             [                                ccgggaa    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAG                                                                                                                                                                                                                                                              ]
[+] EMBL BM627521             [                                ccgggaa    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGAC AAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA  GTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCA    AAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCC                                                     ]
[+] EMBL BM626481             [                                     cc    GTTTCGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA C                                                                                                          ]
[+] EMBL BM634025             [                                             ccgGCTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA  GTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCA    AAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCACCCCAGCTAGAACCACCCGATCTCCA                                                                                                 ]
[+] EMBL BM644706             [                                                 CTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTG                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM651484             [                                               ccgTGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTG  ACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCTTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGC                                               ]
[+] EMBL BM639245             [                                                 ccGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGG                                                             ]
[+] EMBL BM629193             [                                                ccgGCGTGCACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGA  GTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCA    AAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCT             ]
[+] EMBL BM642659             [                                                         ACACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGA                         ]
[+] EMBL BM624109             [                                                       ccgCACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTAC     ]
[+] EMBL BM645029             [                                                       ccgCACGGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGA  GTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCC GGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTA CCTGCACAACGTCGACTGTGGCGACCGCA CCCAGCTAGAACCA CCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGT                                                 ]
[+] EMBL BM627157             [                                                                                                                                                                                                                         cCGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCGCTCTTCGGAGCCGTTGTCGCTCACGAGAGCTTCAAGTGTCC GGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACAGTCTCGCTTTCGACGCG                                                                                                                                                                                            ]




>consensus_9972#0
CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTTTCGCTGCGTGCACACGGC
TGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACAC
ACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCG
GAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCT
CCAGTGTTTCACGGAGTGTTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGT
GTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCGGAA
CTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCG
CTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCT
CCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACG
GTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACA
ACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGC
GTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACG
GTGAGGCCTCGCGCTACCAGTG

consensusID : consensus_9972#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence

                              [CCGCCCACGCGTCCGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGGAACGGTGAGGCCTCGCGCTACCAGT]

[+] EMBL BM639111             [CCGCCCACGCGTCCGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGGAACGGTGAGGCCTCGCGCTACCAGT]




>consensus_9972#1
CCGCCCACGCGTCCGCTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTG
GCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTA
GAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTG
AACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACG
GCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGCAGTAAAACAGTA
GCCCTGAAGCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCT
TCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGC
ATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCT
GCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACT
ACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCC
ACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACT
GCTGGGAACGGTGAGGCCTCGCGCTACCAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9972#0      CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTTTCGCTGCGTGCACA-CGG 59
consensus_9972#1      ---------------------------------------------CCGCCCACGCGTCCG 15
                                                                   * **   * *  * *

consensus_9972#0      CTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACA 119
consensus_9972#1      CTGGTGCGAACGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACA 75
                      ************************************************************

consensus_9972#0      CACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCC 179
consensus_9972#1      CACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCC 135
                      ******************************************* ****************

consensus_9972#0      GGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCC 239
consensus_9972#1      GGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCC 195
                      ************************************************************

consensus_9972#0      TCCAGTGTTTCACGGAGTGT--TGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTC 297
consensus_9972#1      TCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTC 255
                      ********************  *********************** **************

consensus_9972#0      TGTGTGCATTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCG 357
consensus_9972#1      TGTGTGCATTTTGCAAA----GCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCA 311
                      *****************    ************************************** 

consensus_9972#0      GAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAG 417
consensus_9972#1      GT-----TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAG 366
                      *      *****************************************************

consensus_9972#0      CCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACA 477
consensus_9972#1      CCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACA 426
                      ************************************************************

consensus_9972#0      GCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCA 537
consensus_9972#1      GCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCA 486
                      ************************************************************

consensus_9972#0      ACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGC 597
consensus_9972#1      ACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGC 546
                      ************************************************************

consensus_9972#0      ACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCG 657
consensus_9972#1      ACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCG 606
                      ************************************************************

consensus_9972#0      AGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGG- 716
consensus_9972#1      AGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGG 666
                      *********************************************************** 

consensus_9972#0      AACGGTGAGGCCTCGCGCTACCAGTG 742
consensus_9972#1      AACGGTGAGGCCTCGCGCTACCAGT- 691
                      *************************