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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1027#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence
[TGAAGAACTGAAATACATTTGGGCCGAATGGAGAAATGCTAGTGGTAAAAAAGTGAAATTTTTGTTCATGAGATACGTTGAATTAAGTAACATGGCTGCCAGGTTAAATAATTATTCCGATAACGCGGCTTATTGGCTGAAAGATTACGAGGCTGATGATTTCCCTGAACAAATCGAGACACTCTGGCAACAATTGAAACCACTTTATTTACAATTGCACGCTTATGTTCGTCGCGAACTTCGAAAAAAGTACGGTGAAAATATTGTTTCGAAAGACGGTCCCATCCCGGCACATTTGTTAGGTAATATGTGGGCGCAAACTTGGAGCAACATCGCAAATTTTACTACTCCGTATCCAGGAAAACAAATGCCAGACGTCACCGATGCTATGATAAATCAAGGATACAATGCGACAACTATTTTCCGTGTTGCCGAAGATTTTTTCACTTCGATCAATCTCACCGCAATGCCGGATCTTTTCTGGGAACGATCAATATTAGAAAAGCCAAAGGATCGCGAACTAATCTGTCACGCTAGCGCCTGGGATTTCTACGATGGCAAAGACTTTAGAATTAAACAGTGCACTGAAGTCACGATGGAACACTTGTTAACCGCACATCACGAAATGGGTCACGTGGAATATTATCTACAATATAAAAATCAAC]
[+] EMBL BI509028 [TGAAGAACTGAAATACATTTGGGCCGAATGGAGAAATGCTAGTGGTAAAAAAGTGAAATTTTTGTTCATGAGATACGTTGAATTAAGTAACATGGCTGCCAGGTTAAATAATTATTCCGATAACGCGGCTTATTGGCTGAAAGATTACGAGGCTGATGATTTCCCTGAACAAATCGAGACACTCTGGCAACAATTGAAACCACTTTATTTACAATTGCACGCTTATGTTCGTCGCGAACTTCGAAAAAAGTACGGTGAAAATATTGTTTCGAAAGACGGTCCCATCCCGGCACATTTGTTAGGTAATATGTGGGCGCAAACTTGGAGCAACATCGCAAATTTTACTACTCCGTATCCAGGAAAACAAATGCCAGACGTCACCGATGCTATGATAAATCAAGGATACAATGCGACAACTATTTTCCGTGTTGCCGAAGATTTTTTCACTTCGATCAATCTCACCGCAATGCCGGATCTTTTCTGGGAACGATCAATATTAGAAAAGCCAAAGGATCGCGAACTAATCTGTCACGCTAGCGCCTGGGATTTCTACGATGGCAAAGACTTTAGAATTAAACAGTGCACTGAAGTCACGATGGAACACTTGTTAACCGCACATCACGAAATGGGTCACGTGGAATATTATCTACAATATAAAAATCAAC]
consensusID : consensus_1027#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[AATCACACCAGATGTTTACAATTGTTTCTGGTGGGATATCGCTGAAGCTTTTCAAGGTATTGAGCCACCAATAACTCGATCAGAAAATGACTTCGATCCTGGTGCGAAATATCATATAATAGCAAATGTGGAGTACATTAGATATTATGTCAGTTTTATAATACAATTCCAATTTCACAAAGCTCTTTGTATAGAAGCAAAACAATACGATCCGCAGAATTCAAATTCAAAACCATTACATAAATGTGATATTTATAATAATACAGCAGCAGGAAACTTGTTAAAATCAATGTTGGAATTGGGTTTTTCTAAACCTTGGCAAGATGCAATGGAAAAAATCACTGGTCAAAGGAATATGGATACTGCTGGATTATTGGAATATTTCAAACCATTGACAGATTGGCTTACAGAGGAAAATAAAAAAACTAACGAATATATTGGATGGAAATCTAAATCAAAAGGATGCACATGAATTTTGGTCTAACAGTCACTAGAAAAAAAATGAATAAATAAAAATATATGATATAATAAATGAATAAAGTATGAATAAAACGAATAAATTTTTTTTGAATTATTATTTTAAAAAAAAATATTTGTCCATCTTTACGCAATAGATGTATTAACGAATGATTTACGA]
[+] EMBL BI509998 [AATCACACCAGATGTTTACAATTGTTTCTGGTGGGATATCGCTGAAGCTTTTCAAGGTATTGAGCCACCAATAACTCGATCAGAAAATGACTTCGATCCTGGTGCGAAATATCATATAATAGCAAATGTGGAGTACATTAGATATTATGTCAGTTTTATAATACAATTCCAATTTCACAAAGCTCTTTGTATAGAAGCAAAACAATACGATCCGCAGAATTCAAATTCAAAACCATTACATAAATGTGATATTTATAATAATACAGCAGCAGGAAACTTGTTAAAATCAATGTTGGAATTGGGTTTTTCTAAACCTTGGCAAGATGCAATGGAAAAAATCACTGGTCAAAGGAATATGGATACTGCTGGATTATTGGAATATTTCAAACCATTGACAGATTGGCTTACAGAGGAAAATAAAAAAACTAACGAATATATTGGATGGAAATCTAAATCAAAAGGATGCACATGAATTTTGGTCTAACAGTCACTAGAAAAAAAATGAATAAATAAAAATATATGATATAATAAATGAATAAAGTATGAATAAAACGAATAAATTTTTTTTGAATTATTATTTTAAAAAAAAATATTTGTCCATCTTTACGCAATAGATGTATTAACGAATGATTTACGA]
consensusID : consensus_1027#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence
[AGGGAACGGTATTCGCCTAGACTCGTGAAAGTTGCTCCTTGACCGATTGTGGTAGTTGGTCAACTGTTTTATTAATTCGTCGAACTTCAGCGTCGAACATCGAAAGGAAATGTTACGCTCACTGTTGGTGGCGTTATTTATATCATTAATATGGGGATTTCTACGATGGCAAAGACTTTAGAATTAAACAGTGCACTGAAGTCACGATGGAACACTTGTTAACCGCACATCACGAAATGGGTCACGTGGAATATTATCTACAATATAAAAATCAACCCACTTTTTTCAAAGAAGGCGCGAATCCTGGATTCCATGAAGCAGTTGGTGACGTTATAGCACTTAGCGCATCTACACCGAGCCACTTAAAAACCATTAAATTATTGGATGATGATTCGACTGATGTGGAAGCTAATATTAATCATCTTTATTTGAAAGGCCTTGATAAAATCGTCTTCTTACCATTTGCATATGCGATGGAAAAATGGCGCTGGAGCGTATTTCGTGGAGAAATCACGCCAGATGTTTACAATTGTTTCTGGTGGGATAT]
[+] EMBL BI504652 [AGGGAACGGTATTCGCCTAGACTCGTGAAAGTTGCTCCTTGACCGATTGTGGTAGTTGGTCAACTGTTTTATTAATTCGTCGAACTTCAGCGTCGAACATCGAAAGGAAATGTTACGCTCACTGTTGGTGGCGTTATTTATATCATTAATATGGGGATTTCTACGATGGCAAAGACTTTAGAATTAAACAGTGCACTGAAGTCACGATGGAACACTTGTTAACCGCACATCACGAAATGGGTCACGTGGAATATTATCTACAATATAAAAATCAACCCACTTTTTTCAAAGAAGGCGCGAATCCTGGATTCCATGAAGCAGTTGGTGACGTTATAGCACTTAGCGCATCTACACCGAGCCACTTAAAAACCATTAAATTATTGGATGATGATTCGACTGATGTGGAAGCTAATATTAATCATCTTTATTTGAAAGGCCTTGATAAAATCGTCTTCTTACCATTTGCATATGCGATGGAAAAATGGCGCTGGAGCGTATTTCGTGGAGAAATCACGCCAGATGTTTACAATTGTTTCTGGTGGGATAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1027#0 ---TGAAGAACTGAAATACATTTGGGCCGAATGGAGAAATGCTA---GTGGTAAAAAAGT 54
consensus_1027#2 -----AGGGAACGGTATTCGCCTAGACTCGT--GAAAGTTGCTC---CT--TGACCGATT 48
consensus_1027#1 AATCACACCAGATGTTTACAATTGTTTCTGGTGGGATATCGCTGAAGCTTTTCAAGGTAT 60
* * * * * *** * * * *
consensus_1027#0 GAAATTTTTGTTCATGAGATACGTTGAATTAAGTAACATGGCTGCCAGGTT----A---- 106
consensus_1027#2 GTGGTAGTTGGTCAACTGTTTTATTAATTCGTCGAACTTCAGCGTCGAACATCGAA---- 104
consensus_1027#1 TGAGCCACCAATAACTCGATCAGAAAATGACTTCGATCCTGGTGCGAAATATCATATAAT 120
* * * * * * * *
consensus_1027#0 AATAATTATTCCGATAACGCGGCTTATTGGCTGAAAGATTACGAGGCTGATGATTTCCCT 166
consensus_1027#2 AGGAAATGTTACGCTCACTGTTGGTGGCGTTATTTATATCATTAATATGGGGATTTCT-- 162
consensus_1027#1 AGCAAATGTGGAGTACATTAGATATTATGTCAGTTTTATAAT-ACAATTCCAATTTCACA 179
* ** * * * * * * ** * * * *****
consensus_1027#0 GAACAAATCGAGACACTCTGGCAACAATTGAAACCACTTTATTTACAAT-TGCACGCTTA 225
consensus_1027#2 --ACGATGGCAAAGACTTTAGAATTAAAC-AGTGCACTGAAGTCACGAT-GGAACACT-- 216
consensus_1027#1 AAGCTCTTTGTATAGAAGCAAAACAATAC-GATCCGCAGAATTCAAATTCAAAACCATTA 238
* * * * * * * * * ** *
consensus_1027#0 TGTTCGTCGCGAACTTCGAAAAAAGTACGGTGAAAATATTGTTTCGAAAGACGGTCCCAT 285
consensus_1027#2 TGTTAACCGCACATCACGAAATGGGTCACGTGGAA-TATTATCTACAATATAAAAATCAA 275
consensus_1027#1 CATAAATGTGATATTTATAATAATACAGCAGCAGGAAACTTGTTAAAATCAATGTTGGAA 298
* * ** * * * ** *
consensus_1027#0 CCCGGCACATTTGTTAGGTAATATGTGGGCGCAAACTTGGAGCAACATCGCAAATTTTAC 345
consensus_1027#2 CC---CACTTTTTTCAAAGAA------GGCGCGAATCCTGGATTCCATGAAGCAGTTGGT 326
consensus_1027#1 TT---GGGTTTTTCTAAACCTTGGCAAGATGCAATGGAAAAAATCACTGGTCAAAGGAAT 355
*** * * ** * * *
consensus_1027#0 TACTCCGTATC-CAGGAAAACAAATGCCAGACGTCACCGATGCTATGATAAATCAAGGAT 404
consensus_1027#2 GACGTTATAGC-ACTTAGCGCATCTACACCGAGCCACTTAAAAACCATTAAATTATTGG- 384
consensus_1027#1 ATGGATACTGCTGGATTATTGGAATATTTCAAACCATTGACAGATTGGCTTACAGAGGA- 414
* * ** * * *
consensus_1027#0 ACAATGCGACAACTATTTTCCGTGTTG-CCGAAGATTTTTTCACTTCGATCAATCTCACC 463
consensus_1027#2 ATGATGATTCGACTGATGTGGAAGCTA-ATATTAATCATCTTTATTTGAAAGGCCTTG-- 441
consensus_1027#1 -AAATAAAAAAACTAACGAATATATTGGATGGAAATCTAAATCAAAAGGATGCACATGAA 473
** *** * ** * *
consensus_1027#0 GCAATGCCGGATCTTTTCTGGGAACG--ATCAATATTAGAAAAGCCAAAGGATCGCG--- 518
consensus_1027#2 ATAAAATCGTCTTCTTACCATTTGC---ATATGCGATGGAAAA---ATGGCGCTGGA--- 492
consensus_1027#1 TTTTGGTCTAACAGTCACTAGAAAAAAAATGAATAAATAAAAATATATGATATAATAAAT 533
* * * ** **** *
consensus_1027#0 AACTAATCTGTCACGCTAGCGCCTGGGATTTCTACGATGGCAAAGACTTTAGAATTAAAC 578
consensus_1027#2 GCGTATTTCGTGGAGAAATCACGCCAGATGTTTACAATTGTTTCTGGTGGGATAT----- 547
consensus_1027#1 GAATAAAGTATGAATAAAACGAATAAATTTTTTTTGAATTATTATTTTAAAAAAAAATAT 593
** * * * * * * * * *
consensus_1027#0 AGTGCACTGAAGTCACGATGGAACACTTGTTAACCGCACATCACGAAATGGGTCACGTGG 638
consensus_1027#2 ------------------------------------------------------------
consensus_1027#1 TTGTCCATCTTTACGCAATAGATGTATTAACGAATGATTTACGA---------------- 637
consensus_1027#0 AATATTATCTACAATATAAAAATCAAC 665
consensus_1027#2 ---------------------------
consensus_1027#1 ---------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |