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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1031#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence
[ACGGGAGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGATCTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTCTTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATATATATANNNNNNNATATATATATATATATATATATATATATCTCGCTTGTAAGAAAACTTACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTTCGCACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCAGTGGACTAACAGGGCTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAAATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGAGAGGAGAGAGAAAAAAAAGAACGGATCGAGGAGAAATTGATACAGAGGAAAGNCAAAGCGAACAATGGCTGGCTGTGTACAATGGGCGNNGCGCCAATTCGAGTTTTCGGGATACGAAAAAAGAGTGAT]
[+] EMBL BI509078 [ACGGGAGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGATCTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTCTTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATATATATANNNNNNNATATATATATATATATATATATATATATCTCGCTTGTAAGAAAACTTACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTTCGCACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCAGTGGACTAACAGGGCTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAAATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGAGAGGAGAGAGAAAAAAAAGAACGGATCGAGGAGAAATTGATACAGAGGAAAGNCAAAGCGAACAATGGCTGGCTGTGTACAATGGGCGNNGCGCCAATTCGAGTTTTCGGGATACGAAAAAAGAGTGAT]
consensusID : consensus_1031#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 499 fasta sequence
[AGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGATCTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTCTTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATATATATATATATATATATATATATATATATCTCGCTTGTAAGAAAACTTACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTTTCGCACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCANNNGACTAACAGGGCTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAAATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGAGAGGAGAGAGAAAAAAAAGAACGGATCGAGGAGAAA]
[+] EMBL BI514186 [AGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGATCTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTCTTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATATATATATATATATATATATATATATATATCTCGCTTGTAAGAAAACTTACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTTTCGCACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCAGTGGACTAACAGGGCTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAAATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGAGAGGAGAGAGAAAAAAAAGAACGGATCGAGGAGAAA]
[+] EMBL BI514207 [AGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGATCTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTCTTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATATATATATATATATATATATATATATATATCTCGCTTGTAAGAAAACTTACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTTTCGCACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCANNNGACTAACAGGGCTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAAATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGAGAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1031#0 ACGGGAGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGAT 60
consensus_1031#1 -----AGAAATATCACGAAATTTTCTAACGGGAAATTCCAATATAAAATTTTTCTTCGAT 55
*******************************************************
consensus_1031#0 CTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTC 120
consensus_1031#1 CTATTAGAATAACGTAATAATGTTTCGATTTGTTCGTCGAATAACAATAGTGTAATTTTC 115
************************************************************
consensus_1031#0 TTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATA 180
consensus_1031#1 TTCCGATCTGTACGAGGCAGCTTCCTTGCAAACGTGGATCGCGATCGGTTATCACGTATA 175
************************************************************
consensus_1031#0 TATATANNNNNNNATATATATATATATATATATATATATATCTCGCTTGTAAGAAAACTT 240
consensus_1031#1 TATATATATATATATATATATATATATAT------------CTCGCTTGTAAGAAAACTT 223
****** **************** *******************
consensus_1031#0 ACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTT-CG 299
consensus_1031#1 ACGGTGCGCTATTGCTCGCAAACAAACTCAAATCCCGTTTCTCCTGCACCGTTTTTTTCG 283
********************************************************* **
consensus_1031#0 CACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCAGTGGACTAACAGGG 359
consensus_1031#1 CACCACGCTTGTCCATCCGTATCGTTCGTCCATCTTCTTTTCATCANNNGACTAACAGGG 343
********************************************** ***********
consensus_1031#0 CTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAA 419
consensus_1031#1 CTAACATTTCGCGTCGTAATTAATATTATAGTTGGCGAACAATAGCGTATCGATGTGGAA 403
************************************************************
consensus_1031#0 ATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGA 479
consensus_1031#1 ATCGAAAAAGAATGCGAAAAAGGAAGCTGGGAAGAGAGAGAGAAAAGAGAGAGATAGAGA 463
************************************************************
consensus_1031#0 GAGGAGAGAGAAAAAAAAGAACGGATCGAGGAGAAATTGATACAGAGGAAAGNCAAAGCG 539
consensus_1031#1 GAGGAGAGAGAAAAAAAAGAACGGATCGAGGAGAAA------------------------ 499
************************************
consensus_1031#0 AACAATGGCTGGCTGTGTACAATGGGCGNNGCGCCAATTCGAGTTTTCGGGATACGAAAA 599
consensus_1031#1 ------------------------------------------------------------
consensus_1031#0 AAGAGTGAT 608
consensus_1031#1 ---------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |