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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 1036 cluster # 1036       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1036#0 length = 329 sequences # 1  
 consensus_1036#1 length = 290 sequences # 2  
consensusID : consensus_1036#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence 
                              [CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACATATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCNNNAAAAAAA]

[+] EMBL BI512037             [CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACATATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCNNNAAAAAAA]




>consensus_1036#0
CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGC
ACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCG
ATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACAT
ATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTA
TAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGT
TAAAATTTTTTTTATCCGCNNNAAAAAAA

consensusID : consensus_1036#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 290
fasta sequence 
                              [ATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACATATATATATGTATCGCATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA]

[+] EMBL BI517166             [ATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA]
[+] EMBL BI511114             [                                             GTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACATATATATATGTATCGCATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA]




>consensus_1036#1
ATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCAT
TCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAA
ATATACGATGCATATATATATATACATATATATATGTATCGCATAATTTTTCTCCGTATA
TAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAA
ATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1036#0      CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGC 60
consensus_1036#1      ---------------------------ATAATCTCACTACCACCGTCAAGCTCACCGAGC 33
                                                 *********************************

consensus_1036#0      ACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCG 120
consensus_1036#1      ACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCG 93
                      ************************************************************

consensus_1036#0      ATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACAT 180
consensus_1036#1      ATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACAT------ 147
                      ******************* ******************************* **      

consensus_1036#0      ATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTA 240
consensus_1036#1      ----ATATATATGTATCGCATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTA 203
                          ************** *****************************************

consensus_1036#0      TAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGT 300
consensus_1036#1      TAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGT 263
                      ************************************************************

consensus_1036#0      TAAAATTTTTTTTATCCGCNNNAAAAAAA 329
consensus_1036#1      TAAAATTTTTTTTATCCGCAAAAAAAA-- 290
                      *******************   *****


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)