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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 684 fasta sequence
[GCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAAACTGCGTGGAGAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAATGAAATATCGCGAGATCGAATTGGTTAATTATTGGTTAATTTTGCACGAATTTCGCGCGTACGATCAAAGCGTATAAACGATTGACCGAGCGTATATAGAAATAATTATTATTTTTTACGATAATACGACTCGTAGACGAACGTAAGAATTAAGTTCCGGGAAATCGTAATCTTTTCTAATCGATAATTTTTATCTTGGGATAATGGGATTAACGCAAGTCAATTACGAATT]
[+] EMBL BI502862 [GCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAAAGAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAA ]
[+] EMBL BI513505 [ GAAAGAGAGAGAGAGTGATAGAGAGAATGAAT GAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAAACTGCGTGGAGAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAATGAAATATCGCGAGATCGAATTGGTTAATTATTGGTTAATTTTGCACGAATTTCGCGCGTACGATCAAAGCGTATAAACGATTGACCGAGCGTATATAGAAATAATTATTATTTTTTACGATAATACGACTCGTAGACGAACGTAAGAATTAAGTTCCGGGAAATCGTAATCTTTTCTAATCGATAATTTTTATCTTGGGATAATGGGATTAACGCAAGTCAATTACGAATT]
consensusID : consensus_1065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 373 fasta sequence
[CGCGCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGT]
[+] EMBL BI508630 [CGCGCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1065#0 ---GCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATA 57
consensus_1065#1 CGCGCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATA 60
*********************************************************
consensus_1065#0 CGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAG 117
consensus_1065#1 CGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAG 120
************************************************************
consensus_1065#0 CTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGAGAGAG 177
consensus_1065#1 CTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAG------ 174
******************************************************
consensus_1065#0 AGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAGAGAAATGGGATAACGACACA 237
consensus_1065#1 --------TGATAGAGAGAATGAATGAGAGAGAGAGA----GAAATGGGATAACGACACA 222
***************************** *******************
consensus_1065#0 CTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCAC 297
consensus_1065#1 CTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCAC 282
************************************************************
consensus_1065#0 ATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTA 357
consensus_1065#1 ATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTA 342
************************************************************
consensus_1065#0 AATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAAACTGCGT 417
consensus_1065#1 AATTTTTCATAGCACGCTACTTCCGCTACGT----------------------------- 373
*******************************
consensus_1065#0 GGAGAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAATGAAATATCGCGAGATCGAATTGGT 477
consensus_1065#1 ------------------------------------------------------------
consensus_1065#0 TAATTATTGGTTAATTTTGCACGAATTTCGCGCGTACGATCAAAGCGTATAAACGATTGA 537
consensus_1065#1 ------------------------------------------------------------
consensus_1065#0 CCGAGCGTATATAGAAATAATTATTATTTTTTACGATAATACGACTCGTAGACGAACGTA 597
consensus_1065#1 ------------------------------------------------------------
consensus_1065#0 AGAATTAAGTTCCGGGAAATCGTAATCTTTTCTAATCGATAATTTTTATCTTGGGATAAT 657
consensus_1065#1 ------------------------------------------------------------
consensus_1065#0 GGGATTAACGCAAGTCAATTACGAATT 684
consensus_1065#1 ---------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |