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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1132#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 753 fasta sequence
[AATATTTTTTTAAATAATGCACAACGGATAATAGAATTGACGAAATATTATTAAAAAAAAAACAAAAAAAAAAGAAATATCCATATCGCACTTGAACACTTGAAGAATTATAAGGGCGATTTCACGATGCGAGTAACACGACGACGATAAAATGAGAATGTACGCGCAAGAGATGGCGTTCTTTCCCGTCTTCGAGATACTCGTCGCTAAAATGTTCGGAATAACAACTTTCGTATAGTATTACACTGACTCTGTTTACACGTCTCGTTGTTCGCGTGCTCGATGATTTTTCTTTGCGATAAAGATGAACTTAGNTACTTGAAAGGAGCGCATAGGACAGTGCCTTACACACAATTTATCTAGTTTTACATTTTACATACATACATAGTATTATAACTTTCCAGATGTTTACCACAGTTGAACGCGTATAAGAGAATATAAGAGAACTGAAAGAGTTTTTATTCTTTTCACCTGTGACTTCGTGTAAACATTGTCTCTGTATAAAGAAACGAGAGATCCTCTTCGTTCATATATAACTTTATATATAACCTTACATGCATATACACGACGAGAATGTAATTTTCGATCGATCGATACGGTCCGGAAAGTAATTGTATTTTTTTTTAACCTTTCTTATTCGTTGCTTTACATTTTTTTTTTTATTTCGCGATTTCACGAGTCTCGAAAGTGTCGCGTTACCGTTCAAAAAATTCGAACCTTTTTTTCGTTTCAAGTTTCGCGTGTCGCTTTATC]
[+] EMBL BI509069 [AATATTTTTTTAAATAATGCACAACGGATAATAGAATTGACGAAATATTATTAAAAAAAAAACAAAAAAAAAAGAAATATCCATATCGCACTTGAACACTTGAAGAATTATAAGGGCGATTTCACGATGCGAGTAACACGACGACGATAAAATGAGAATGTACGCGCAAGAGATGGCGTTCTTTCCCGTCTTCGAGATACTCGTCGCTAAATTGTTCGGAATAACAACTTTCGTATAGTATTACACTGACTCTGTTTACACGTCTCGTTGTTCGCGTGCTCGATGATTTTTCTTTGCGATAAAGATGAACTTAGNTACTTGAAAGGAGCGCATAGGACAGTGCCTTACACACAATTTATCTAGTTTTACATTTTACATACATACATAGTATTATAACTTTCCAGATGTTTACCACAGTTGAACGCGTATAAGAGAATATAAGAGAACTGAAAGAGTTTTTATTCTTTTCACCTGTGACTTCGTGTAA ]
[+] EMBL BI509813 [ ATAAAATGAGAATGTACGCGCAAGAGATGGCGTTCTTTCCCGTCTTCGAGATACTCGTCGCTAAAATGTTCGGAATAACAACTTTCGTATAGTATTACACTGACTCTGTTTACACGTCTCGTTGTTCGCGTGCTCGATGATTTTTCTTTGCGATAAAGATGAACTTAGCTACTTGAAAGGAGCGCATAGGACAGTGCCTTACACACAATTTATCTAGTTTTACATTTTACATACATACATAGTATTATAACTTTCCAGATGTTTACCACAGTTGAACGCGTATAAGAGAATATAAGAGAACTGAAAGAGTTTTTATTCTTTTCACCTGTGACTTCGTGTAAACATTGTCTCTGTATAAAGAAACGAGAGATCCTCTTCGTTCATATATAACTTTATATATAACCTTACATGCATATACACGACGAGAATGTAATTTTCGATCGATCGATACGGTCCGGAAAGTAATTGTATTTTTTTTTAACCTTTCTTATTCGTTGCTTTACATTTTTTTTTTTATTTCGCGATTTCACGAGTCTCGAAAGTGTCGCGTTACCGTTCAAAAAATTCGAACCTTTTTTTCGTTTCAAGTTTCGCGTGTCGCTTTATC]
consensusID : consensus_1132#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 312 fasta sequence
[TTTCGTCAATTCTATTATCCGTTGTGCATTATTTAAAAAAATATTCCAAAAAAGATTAATAATTCGTATGCTTAACTCCATCGATAACCATCGCTCGGTCGTCACGTCGATTATTATCGATCGATCTCGGTAATTTCTTTCTCTCCCCCCTTGAAAGCGATAGTTATCGAAGCATTTTTCGCGCGTAATAGTAATAACCGGTGCGCGTAACACAGATCTCAATGCGGAACGTTACATCGATTGTATAATCGATATATACGATTAAAGGGGAAAGAAACGTGTTAACGATCACTTAAAAAAAAAAAAAAAAAA]
[+] EMBL BI506211 [TTTCGTCAATTCTATTATCCGTTGTGCATTATTTAAAAAAATATTCCAAAAAAGATTAATAATTCGTATGCTTAACTCCATCGATAACCATCGCTCGGTCGTCACGTCGATTATTATCGATCGATCTCGGTAATTTCTTTCTCTCCCCCCTTGAAAGCGATAGTTATCGAAGCATTTTTCGCGCGTAATAGTAATAACCGGTGCGCGTAACACAGATCTCAATGCGGAACGTTACATCGATTGTATAATCGATATATACGATTAAAGGGGAAAGAAACGTGTTAACGATCACTTAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1132#0 AATATTTTTTTAAATAATGCACAACGGATAATAGAATTGACGAAATATTATTAAAAAAAA 60
consensus_1132#1 -------------------TTTCGTCAATTCTATTATCCGTTGTGCATTATTTAAAAAAA 41
** ** ** ****** *******
consensus_1132#0 AACAAAAAAAAAAGAAATATCCATATCGCACTTGAACACTTGAAGAATTATAAGGGCGAT 120
consensus_1132#1 TATTCCAAAAAAG-----ATTAATA----ATTCGTATGCTT----AACTCCATCGATAAC 88
* ****** ** *** * * * * *** ** * * * *
consensus_1132#0 TTCACGATGCGAGTAACACGACGACGATAAAATGAGAATGTACGCGCAAGAGATGGCGTT 180
consensus_1132#1 --CATCGCTCGGTCGTCACGTCGATTATTATC---GATCGATCTCG---GTAATTTCTTT 140
** ** **** *** ** * ** * * ** * ** * **
consensus_1132#0 CTTTCCCGTCTTCGAGATACTCGTCGCTAAAATGTT-------CGGAATAACAACTTTCG 233
consensus_1132#1 CTCTCCCCCCTTGAAAGCGATAGTTATCGAAGCATTTTTCGCGCGTAATAGTAATAACCG 200
** **** *** * * ** ** ** ** **** ** **
consensus_1132#0 TATAGTATTACACTGACTCTGTTT--ACACGTCTCGTTGTTCGCGTGCTCGATGATTTTT 291
consensus_1132#1 GTGCGCGTAACACAGATCTCAATGCGGAACGTTACATCGATTGTATAATCGATATATACG 260
* * **** ** * **** * * * * * * ***** *
consensus_1132#0 CTTT---GCGATAAAGATGAACTTA--GNTACTTGAAAGGAGCGCATAGGACAGTGCCTT 346
consensus_1132#1 ATTAAAGGGGAAAGAAACGTGTTAACGATCACTTAAAAAAAAAAAAAAAAAA-------- 312
** * ** * * * * * * **** *** * * * *
consensus_1132#0 ACACACAATTTATCTAGTTTTACATTTTACATACATACATAGTATTATAACTTTCCAGAT 406
consensus_1132#1 ------------------------------------------------------------
consensus_1132#0 GTTTACCACAGTTGAACGCGTATAAGAGAATATAAGAGAACTGAAAGAGTTTTTATTCTT 466
consensus_1132#1 ------------------------------------------------------------
consensus_1132#0 TTCACCTGTGACTTCGTGTAAACATTGTCTCTGTATAAAGAAACGAGAGATCCTCTTCGT 526
consensus_1132#1 ------------------------------------------------------------
consensus_1132#0 TCATATATAACTTTATATATAACCTTACATGCATATACACGACGAGAATGTAATTTTCGA 586
consensus_1132#1 ------------------------------------------------------------
consensus_1132#0 TCGATCGATACGGTCCGGAAAGTAATTGTATTTTTTTTTAACCTTTCTTATTCGTTGCTT 646
consensus_1132#1 ------------------------------------------------------------
consensus_1132#0 TACATTTTTTTTTTTATTTCGCGATTTCACGAGTCTCGAAAGTGTCGCGTTACCGTTCAA 706
consensus_1132#1 ------------------------------------------------------------
consensus_1132#0 AAAATTCGAACCTTTTTTTCGTTTCAAGTTTCGCGTGTCGCTTTATC 753
consensus_1132#1 -----------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |