These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1267#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence [TATCGTAATCGCGGGTCGTACCATTGTTGTTGCAGCAAGAACTCCACCTCGTATTTCAAACTGGACTCGTCTGGGGAAGCCAAACTTAGCAACAGCACGCTCACGTTCACGGTCAAGGTTCCGCGAAGGTGGGTGCGAAGGTGTTGGTGCGACGTGTAGTGGTTATTGTTCTGGTTCTTGTACTGGTTCTTGGGGTCGTTAGAGGAGGTCGACGACCGGTTCGACAGGCCGGTGGCGTCACCTGGCCATCGCATTCCGCAGCAGAAATCCGCATCTTGGACCGGGGGTAGAAGCCGCTTGTCGTAACGGGTCGACAGCAGCAGGTTGTCCAGGATCTCCTTGTCCGACTTGCCGTCCTCGAAGATGTCCTCGGCACGCACGAGAGTGACAAGAGTGAGGGCAAGTGTGAGGATACAGAGGATGGTGAAGATGAGGGAGCTTGCGAGGGAGGTGAGAGACAGCGA] [+] EMBL BI507717 [TATCGTAATCGCGGGTCGTACCATTGTTGTTGCAGCAAGAACTCCACCTCGTATTTCAAACTGGACTCGTCTGGGGAAGCCAAACTTAGCAACAGCACGCTCACGTTCACGGTCAAGGTTCCGCGAAGGTGGGTGCGAAGGTGTTGGTGCGACGTGTAGTGGTTATTGTTCTGGTTCTTGTACTGGTTCTTGGGGTCGTTAGAGGAGGTCGACGACCGGTTCGACAGGCCGGTGGCGTCACCTGGCCATCGCATTCCGCAGCAGAAATCCGCATCTTGGACCGGGGGTAGAAGCCGCTTGTCGTAACGGGTCGACAGCAGCAGGTTGTCCAGGATCTCCTTGTCCGACTTGCCGTCCTCGAAGATGTCCTCGGCACGCACGAGAGTGACAAGAGTGAGGGCAAGTGTGAGGATACAGAGGATGGTGAAGATGAGGGAGCTTGCGAGGGAGGTGAGAGACAGCGA] consensusID : consensus_1267#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 310 fasta sequence [ATCGTAATCGCGGGTCGTACCATTGTTGTTGCAGCAAGAACTCCACCTCGTATTTCAAACTGGACTCGTCTGGGGAAGCCAAACTTAGCAACAGCACGCTCACGTTCACGGTCAAGGTTCCTTGGACCGGGGGTAGAAGCCGCTTGTCGTAACGGGTCGACAGCAGCAGGTTGTCCAGGATCTCCTTGTCCGACTTGCCGTCCTCGAAGATGTCCTCGGCACGCACGAGAGTGACAAGAGTGAGGGCAAGTGTGAGGATACAGAGGATGGTGAAGATGAGGGAGCTTGCGAGGGAGGTAAGAGACAGCGA] [+] EMBL BI508873 [ATCGTAATCGCGGGTCGTACCATTGTTGTTGCAGCAAGAACTCCACCTCGTATTTCAAACTGGACTCGTCTGGGGAAGCCAAACTTAGCAACAGCACGCTCACGTTCACGGTCAAGGTTCCTTGGACCGGGGGTAGAAGCCGCTTGTCGTAACGGGTCGACAGCAGCAGGTTGTCCAGGATCTCCTTGTCCGACTTGCCGTCCTCGAAGATGTCCTCGGCACGCACGAGAGTGACAAGAGTGAGGGCAAGTGTGAGGATACAGAGGATGGTGAAGATGAGGGAGCTTGCGAGGGAGGTAAGAGACAGCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1267#0 TATCGTAATCGCGGGTCGTACCATTGTTGTTGCAGCAAGAACTCCACCTCGTATTTCAAA 60 consensus_1267#1 -ATCGTAATCGCGGGTCGTACCATTGTTGTTGCAGCAAGAACTCCACCTCGTATTTCAAA 59 *********************************************************** consensus_1267#0 CTGGACTCGTCTGGGGAAGCCAAACTTAGCAACAGCACGCTCACGTTCACGGTCAAGGTT 120 consensus_1267#1 CTGGACTCGTCTGGGGAAGCCAAACTTAGCAACAGCACGCTCACGTTCACGGTCAAGGTT 119 ************************************************************ consensus_1267#0 CCGCGAAGGTGGGTGCGAAGGTGTTGGTGCGACGTGTAGTGGTTATTGTTCTGGTTCTTG 180 consensus_1267#1 CC---------------------------------------------------------- 121 ** consensus_1267#0 TACTGGTTCTTGGGGTCGTTAGAGGAGGTCGACGACCGGTTCGACAGGCCGGTGGCGTCA 240 consensus_1267#1 ------------------------------------------------------------ consensus_1267#0 CCTGGCCATCGCATTCCGCAGCAGAAATCCGCATCTTGGACCGGGGGTAGAAGCCGCTTG 300 consensus_1267#1 -----------------------------------TTGGACCGGGGGTAGAAGCCGCTTG 146 ************************* consensus_1267#0 TCGTAACGGGTCGACAGCAGCAGGTTGTCCAGGATCTCCTTGTCCGACTTGCCGTCCTCG 360 consensus_1267#1 TCGTAACGGGTCGACAGCAGCAGGTTGTCCAGGATCTCCTTGTCCGACTTGCCGTCCTCG 206 ************************************************************ consensus_1267#0 AAGATGTCCTCGGCACGCACGAGAGTGACAAGAGTGAGGGCAAGTGTGAGGATACAGAGG 420 consensus_1267#1 AAGATGTCCTCGGCACGCACGAGAGTGACAAGAGTGAGGGCAAGTGTGAGGATACAGAGG 266 ************************************************************ consensus_1267#0 ATGGTGAAGATGAGGGAGCTTGCGAGGGAGGTGAGAGACAGCGA 464 consensus_1267#1 ATGGTGAAGATGAGGGAGCTTGCGAGGGAGGTAAGAGACAGCGA 310 ******************************** *********** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |