These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1292#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [TACGAAGTATATCGAAGTATATTGATCACATCGAGAAACAACAACGACACACGACATTAATCAGCGATAACAATAGCGTAAGACTTCTTTTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTAATTATTTTTTATTTTATTTATCGTTCGCTTTTACGCGTGACGCATGCATTAAAAGTAGTCGGGACTTTAAAGAGCATACAGCGTTANNGGACACATCGAGCGAGAAGGCATATATATATATATATACGAGACGACAGGCAGAGAGAAAAAAAGTTTGTTTACCTTTAGGAGGAAAGGACGAGTGAGAGAAGAGGAAGAGAGAAAGAGAGAGAGGAAAGAAAAGAAATGACGAAAATAAAATCGAATCTACGCGCACAATCTACGCGAGAGTTTTTTTTTTACGCTCGTCGGTGAAAGTTCTCCGGCAATCCAGCTGGTCGAAGGGCT] [+] EMBL BI514866 [TACGAAGTATATCGAAGTATATTGATCACATCGAGAAACAACAACGACACACGACATTAATCAGCGATAACAATAGCGTAAGACTTCTTTTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTAATTATTTTTTATTTTATTTATCGTTCGCTTTTACGCGTGACGCATGCATTAAAAGTAGTCGGGACTTTAAAGAGCATACAGCGTTANNGGACACATCGAGCGAGAAGGCATATATATATATATATACGAGACGACAGGCAGAGAGAAAAAAAGTTTGTTTACCTTTAGGAGGAAAGGACGAGTGAGAGAAGAGGAAGAGAGAAAGAGAGAGAGGAAAGAAAAGAAATGACGAAAATAAAATCGAATCTACGCGCACAATCTACGCGAGAGTTTTTTTTTTACGCTCGTCGGTGAAAGTTCTCCGGCAATCCAGCTGGTCGAAGGGCT] consensusID : consensus_1292#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 379 fasta sequence [CTTTTCTTTTTTAATTATTTTTTATTTTTCGTTTTATTTATCGTTCGCTTTTACGCGTGACGCATGCATTAAAAGTAGTCGTGACTTTAAAGAGCATACAGCGTTAGTGGACACATCGAGCGAGAAGGCATATATATATATATACGAGACGACAGGCAGAAAAAAAAAACAAAAAAAAAGAAAAAGAGAAAAAAATAGTCACCGGAACAATATACATACATACATACATCACATATAACACACGCATATGTTACGTATAAAAGAGACACAAAATCTGATCGCTAAAAATAAGTGCGCGCGCGTAGCCGAATCGGGATTATGTAACAAATTAAATAGAAGAAAACAGAATATTAAAAAGAAACACACACACAAAAAAAAA] [+] EMBL BI507488 [CTTTTCTTTTTTAATTATTTTTTATTTTTCGTTTTATTTATCGTTCGCTTTTACGCGTGACGCATGCATTAAAAGTAGTCGTGACTTTAAAGAGCATACAGCGTTAGTGGACACATCGAGCGAGAAGGCATATATATATATATACGAGACGACAGGCAGAAAAAAAAAACAAAAAAAAAGAAAAAGAGAAAAAAATAGTCACCGGAACAATATACATACATACATACATCACATATAACACACGCATATGTTACGTATAAAAGAGACACAAAATCTGATCGCTAAAAATAAGTGCGCGCGCGTAGCCGAATCGGGATTATGTAACAAATTAAATAGAAGAAAACAGAATATTAAAAAGAAACACACACACAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1292#0 TACGAAGTATATCGAAGTATATTGATCACATCGAGAAACAACAACGACACACGACATTAA 60 consensus_1292#1 ------------------------------------------------------------ consensus_1292#0 TCAGCGATAACAATAGCGTAAGACTTCTTTTTTTTTTTTCTTTTCTTTTCTTTTCTTTTT 120 consensus_1292#1 ---------------------------------------CTTTTCTTTTTTAATTATTTT 21 ********** * * **** consensus_1292#0 TAATTATTTTTTATTTTATTTATCGTTCGCTTTTACGCGTGACGCATGCATTAAAAGTAG 180 consensus_1292#1 T---TATTTTTCGTTTTATTTATCGTTCGCTTTTACGCGTGACGCATGCATTAAAAGTAG 78 * ******* *********************************************** consensus_1292#0 TCGGGACTTTAAAGAGCATACAGCGTTANNGGACACATCGAGCGAGAAGGCATATATATA 240 consensus_1292#1 TCGTGACTTTAAAGAGCATACAGCGTTAGTGGACACATCGAGCGAGAAGGCATATATATA 138 *** ************************ ****************************** consensus_1292#0 TATATATACGAGACGACAGGCAGAGAGAAAAAAAGTTTGTTTACCTTTAGGAGGAAAGGA 300 consensus_1292#1 TATATA--CGAGACGACAGGCAGAAAAAAAAAACAAAAAAAAAGA--AAAAGAGAAAAAA 194 ****** **************** * ****** * * **** * consensus_1292#0 CGAGTGAGAGAAGAGGAAGAGAGAAAGAGAGAGAGGAAAGAAAAGAAATGACGAAAATAA 360 consensus_1292#1 ATAGTCACCGGAACAATATACATACATACATACATCACATATAACACACG-CATATGTTA 253 *** * * * * * * * * * * * * * * * ** * * * * * * * consensus_1292#0 AATCGAATCTACGCGCACAATCTACGCGAGAGTTTTTTTTTTACGCTCGTCGGTGAA--- 417 consensus_1292#1 CGTATAAAAGAGACACAAAATCTGATCGCTAAAAATAAGTGCGCGCGCGTAGCCGAATCG 313 * ** * * ** ***** ** * * * *** *** * *** consensus_1292#0 -AGTTCTCCGGCAATCCAGCTGGTCGAAGGGCT--------------------------- 449 consensus_1292#1 GGATTATGTAACAAATTAAATAGAAGAAAACAGAATATTAAAAAGAAACACACACACAAA 373 ** * *** * * * *** consensus_1292#0 ------ consensus_1292#1 AAAAAA 379 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |