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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1304#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence
[CTCTCTCTCTCTCTCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGACGAATTGTATAATCGATAATCATGGTCCATCGATAATTCTTGACGATCAATGTGTGTTCATTGACGAGCCAAATGGT]
[+] EMBL BI509854 [CTCTCTCTCTCTCTCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGACGAATTGTATAATCGATAATCATGGTCCATCGATAATTCTTGACGATCAATGTGTGTTCATTGACGAGCCAAATGGT]
consensusID : consensus_1304#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence
[TTTTATCGAGTATCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGA]
[-] EMBL BI507411 [TTTTATCGAGTATCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1304#0 CTCTCTCTCTCTCTCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGT 60
consensus_1304#1 -TTTTATCGAGTATCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGT 59
* * * ***********************************************
consensus_1304#0 GGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGA 120
consensus_1304#1 GGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGA 119
************************************************************
consensus_1304#0 GGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAG 180
consensus_1304#1 GGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAG 179
************************************************************
consensus_1304#0 CGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCAC 240
consensus_1304#1 CGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCAC 239
************************************************************
consensus_1304#0 CCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCG 300
consensus_1304#1 CCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCG 299
************************************************************
consensus_1304#0 GACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCG 360
consensus_1304#1 GACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCG 359
************************************************************
consensus_1304#0 TCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTC 420
consensus_1304#1 TCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTC 419
************************************************************
consensus_1304#0 CCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGT 480
consensus_1304#1 CCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGT 479
************************************************************
consensus_1304#0 CGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCT 540
consensus_1304#1 CGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCT 539
************************************************************
consensus_1304#0 CTTAGGAAGAAATTGTTTAAAAAAAATTACATCGACGAATTGTATAATCGATAATCATGG 600
consensus_1304#1 CTTAGGAAGAAATTGTTTAAAAAAAATTACATCGA------------------------- 574
***********************************
consensus_1304#0 TCCATCGATAATTCTTGACGATCAATGTGTGTTCATTGACGAGCCAAATGGT 652
consensus_1304#1 ----------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |