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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1305#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence
[GCTACGTTAGTTACATTAAATGTACCCAGTGGCACAGAATTTGGAATAGATTTAAAATCGTGGAACACAGCAGATAAATTTAAAGGTATTAAAATGATTCCACCAGGCTTTCATTATATCCATTACAGTGCTATAGATGAATTTGGAGAAGCAAAACCAAAAGTTGGTTTTTTCCATACATTTAAGAAATCTGAATTTTTAGTTAAACATTGGGATACAACAGAAGAAGATTTGAGTTCAGAAAGTACGATGATAGTACTTAATTTGTAGAACAAGAGACAGTTGAAAGATTGAAGAAGAATATGAAAGATTTAGATAAATTTCTAGGATGTTATCCTTATGATATATGGAAGCAATGGAAAGATTTAACAAATCACATTACTCCTTCTCTTGTAGAACGTTGCTCACCTATATGTGGCTTTGTAAGATCAGCTTTAGAATTAGAATATTGTTCTGATGCTACAAGGCCAAGAGGTGGAGAATCAAAACCAAAAAAAAGAAGGAGTGGAATTACTGTAGAAGAAAAAGAAGATGAACTTCTTCCTGATATGAAACCTAAACCTGGTACAGAACTTCGACTTTCTAAAATACCTAACAAACAATATCCAGATGGAGCATCACCAACTGAAATTACAAAATATTCTTTGGATTCAAGTTATGTATTG]
[+] EMBL BI507407 [GCTACGTTAGTTACATTAAATGTACCCAGTGGCACAGAATTTGGAATAGATTTAAAATCGTGGAACACAGCAGATAAATTTAAAGGTATTAAAATGATTCCACCAGGCTTTCATTATATCCATTACAGTGCTATAGATGAATTTGGAGAAGCAAAACCAAAAGTTGGTTTTTTCCATACATTTAAGAAATCTGAATTTTTAGTTAAACATTGGGATACAACAGAAGAAGATTTGAGTTCAGAAAGTACGATGATAGTACTTAATTTGTAGAACAAGAGACAGTTGAAAGATTGAAGAAGAATATGAAAGATTTAGATAAATTTCTAGGATGTTATCCTTATGATATATGGAAGCAATGGAAAGATTTAACAAATCACATTACTCCTTCTCTTGTAGAACGTTGCTCACCTATATGTGGCTTTGTAAGATCAGCTTTAGAATTAGAATATTGTTCTGATGCTACAAGGCCAAGAGGTGGAGAATCAAAACCAAAAAAAAGAAGGAGTGGAATTACTGTAGAAGAAAAAGAAGATGAACTTCTTCCTGATATGAAACCTAAACCTGGTACAGAACTTCGACTTTCTAAAATACCTAACAAACAATATCCAGATGGAGCATCACCAACTGAAATTACAAAATATTCTTTGGATTCAAGTTATGTATTG]
consensusID : consensus_1305#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence
[CTTTCATTATATCCATTACAGTGCTATAGATGAATTTGGAGAAGCAAAACCAAAAGTTGGTTTTTTCCATACATTTAAGAAATCTGAATTTTTAGTTAAACATTGGGATACAACAGAAGAAGATTTGAGTTCAGAAATTGTAGAACAAGAGACAGTTGAAAGATTGAAGAAGAATATGAAAGATTTAGATAAATTTCTAGGATGTTATCCTTATGATATATGGAAGCAGTGGAAAGATTTAACAAATCACATTACTCCTTCTCTTGTAGAACGTTGCTCACCTATATGTGGCTTTGTAAGATCAGCTTTAGAATTAGAATATTGTTCTGATGCTACAAGGCCAAGAGGTGGAGAATCAAAACCAAAAAAAAGAAGGAGTGGAATTACTGTAGAAGAAAAAGAAGATGAACTTCTTCCTGATATGAAACCTAAACCTGGTACAGAACTTCGACTTTCTAAAATACCTAACAAACAATATCCAGATGGAGCATCACCAACTGAAATTANNAAATATTCTTTGGATTCAAGTTATGTATTGGATATTATT]
[+] EMBL BI514643 [CTTTCATTATATCCATTACAGTGCTATAGATGAATTTGGAGAAGCAAAACCAAAAGTTGGTTTTTTCCATACATTTAAGAAATCTGAATTTTTAGTTAAACATTGGGATACAACAGAAGAAGATTTGAGTTCAGAAATTGTAGAACAAGAGACAGTTGAAAGATTGAAGAAGAATATGAAAGATTTAGATAAATTTCTAGGATGTTATCCTTATGATATATGGAAGCAGTGGAAAGATTTAACAAATCACATTACTCCTTCTCTTGTAGAACGTTGCTCACCTATATGTGGCTTTGTAAGATCAGCTTTAGAATTAGAATATTGTTCTGATGCTACAAGGCCAAGAGGTGGAGAATCAAAACCAAAAAAAAGAAGGAGTGGAATTACTGTAGAAGAAAAAGAAGATGAACTTCTTCCTGATATGAAACCTAAACCTGGTACAGAACTTCGACTTTCTAAAATACCTAACAAACAATATCCAGATGGAGCATCACCAACTGAAATTANNAAATATTCTTTGGATTCAAGTTATGTATTGGATATTATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1305#0 GCTACGTTAGTTACATTAAATGTACCCAGTGGCACAGAATTTGGAATAGATTTAAAATCG 60
consensus_1305#1 ------------------------------------------------------------
consensus_1305#0 TGGAACACAGCAGATAAATTTAAAGGTATTAAAATGATTCCACCAGGCTTTCATTATATC 120
consensus_1305#1 -----------------------------------------------CTTTCATTATATC 13
*************
consensus_1305#0 CATTACAGTGCTATAGATGAATTTGGAGAAGCAAAACCAAAAGTTGGTTTTTTCCATACA 180
consensus_1305#1 CATTACAGTGCTATAGATGAATTTGGAGAAGCAAAACCAAAAGTTGGTTTTTTCCATACA 73
************************************************************
consensus_1305#0 TTTAAGAAATCTGAATTTTTAGTTAAACATTGGGATACAACAGAAGAAGATTTGAGTTCA 240
consensus_1305#1 TTTAAGAAATCTGAATTTTTAGTTAAACATTGGGATACAACAGAAGAAGATTTGAGTTCA 133
************************************************************
consensus_1305#0 GAAAGTACGATGATAGTACTTAATTTGTAGAACAAGAGACAGTTGAAAGATTGAAGAAGA 300
consensus_1305#1 GAAA--------------------TTGTAGAACAAGAGACAGTTGAAAGATTGAAGAAGA 173
**** ************************************
consensus_1305#0 ATATGAAAGATTTAGATAAATTTCTAGGATGTTATCCTTATGATATATGGAAGCAATGGA 360
consensus_1305#1 ATATGAAAGATTTAGATAAATTTCTAGGATGTTATCCTTATGATATATGGAAGCAGTGGA 233
******************************************************* ****
consensus_1305#0 AAGATTTAACAAATCACATTACTCCTTCTCTTGTAGAACGTTGCTCACCTATATGTGGCT 420
consensus_1305#1 AAGATTTAACAAATCACATTACTCCTTCTCTTGTAGAACGTTGCTCACCTATATGTGGCT 293
************************************************************
consensus_1305#0 TTGTAAGATCAGCTTTAGAATTAGAATATTGTTCTGATGCTACAAGGCCAAGAGGTGGAG 480
consensus_1305#1 TTGTAAGATCAGCTTTAGAATTAGAATATTGTTCTGATGCTACAAGGCCAAGAGGTGGAG 353
************************************************************
consensus_1305#0 AATCAAAACCAAAAAAAAGAAGGAGTGGAATTACTGTAGAAGAAAAAGAAGATGAACTTC 540
consensus_1305#1 AATCAAAACCAAAAAAAAGAAGGAGTGGAATTACTGTAGAAGAAAAAGAAGATGAACTTC 413
************************************************************
consensus_1305#0 TTCCTGATATGAAACCTAAACCTGGTACAGAACTTCGACTTTCTAAAATACCTAACAAAC 600
consensus_1305#1 TTCCTGATATGAAACCTAAACCTGGTACAGAACTTCGACTTTCTAAAATACCTAACAAAC 473
************************************************************
consensus_1305#0 AATATCCAGATGGAGCATCACCAACTGAAATTACAAAATATTCTTTGGATTCAAGTTATG 660
consensus_1305#1 AATATCCAGATGGAGCATCACCAACTGAAATTANNAAATATTCTTTGGATTCAAGTTATG 533
********************************* *************************
consensus_1305#0 TATTG--------- 665
consensus_1305#1 TATTGGATATTATT 547
*****
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |